Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01314 ATGGAAGATTGGAAGATTTCTTGTGAGAAGGATTTATATGTTTTTGAGGATTCCAGTTATGAAGAAGAGGACCCGGGTCAAAGGGGAGTTATTGTGGGTAAAGCTACGGGCTGTTGCTTGCAAGAAATGGATCCTGATCGCTATGGTCTACATCAAGGCTGGGATAATAACAGCGCTCTAGAGGGTTATGGTGCAGTACATGAGCCAAATTTCCGGGTTGGTGATTCATATGATGAAAGAAGGTTTATAGATGAGAAGTATTCAAGGGATAGTATCTACCAGAGGAATGCCTTCCCCCGTGATGTTTTGGAGCGGGAGACCTATCCACCACCAGGGCCTGCAGTTGGCCATTGGGGTCAATCCAAAAGGAGAGGTTATGATGAAGATTATCCACTGGACCGAGACTCTAGACGCCCTCAGAGGCCTTATTATGATTCATATCATCAGATTGATGCTTTTAGAGATCATGATATTGACACATATGCGGAATTTGATAAGTTACATGATGGCTATGCTGGAATGGAAAGCTATGTTGATCGAGGATATGATAAACCTGCTAGGTTTGGGGGACATGACCGTGATGCATATGATGATTATGGCTACAGGTCACGTGTTTCCCATCATCGTAGGGAGGATAGCCGTGAGCAGGATTATGATCATGGTCGGCATAGTTATGATTCTGATTATGAAAGAGGTAGAAGGGATGGTAATTGGAGGCGGCATGAATCCCATGACAGGGACCACGATAAAAGATGTCTTAGTCGGGAAAAAGACCTGAATCCACATAGGAGGCATGAGCGATCCCACTCTCGCTCACGTTCTCGCTCACATTCCCGATCCCACTCCCACTCCCATTCCCATTCCCATTCTCGGTCCCGTTCCCGATCTCATGGTTATGATGACCGTCCAAGATCAAGGTCCCCTCGAGGTCAAAGCCGTGGCAGAAGTTATCGAGAAGACAGTTATACTAGCAGTCGATATGATAGAAGTGAAAAGCATAAGGATCGTGAGGTGAAATGTCAGCGTGAGCATTATTATGTGGCTCCATCTGCCACTGTTGTTGTGAAAGGTCTTTCACAAAAGACAACTGAAGAAGATTTATACCAGATACTTGCTGAATGGGGACCCCTTCGTCATGTTCGTGTTATAAAAGAGAGGAATTCTGGCATTTCTCGTGGATTTGCATTTATTGATTTTCCTTCGGTGGGAGCTGCACAAACAATGATGGACAAGCTTGGAGATGATGGTCTTGTTATTGATGGCAGAAAGCTTCTCTTTGAATATAGTAGTAAGCCAACTGGAGGTCCAGGTGGTCAGGAGGGGGCTATGAGATTGGGCCGTAATCATAAAAACATCAGGGTACCATCTGATTGGATGTGCACTATATGTGGCTACATCAATTTTGCACGGAGGACATCCTGCTACCAGTGTAATGAGCCACGAACTGAGGATGCTCCTGCAGCAGATATCACCTTATCAAATCCGACAGCCTCAGGAAAGAAAGGATTGGAAGCAGGTCCAACTCATGTTTTGGTTGTGCGTGGATTGGATGAAAATGCTGATGAGGAAATGTTGCGCTATGAGTTTTCCAAGCATGCTCCAATAAAGGATCTGCGTCTTGTGAGGGACAAATTTACTCATGTCTCAAGGGGTTTTGCATTTGTGCATTTTTATTCGGTGGAGGATGCTACTAGAGCTCTTGAAGCAACAAATGGAACAGCTCTTGAGAAGAATGGACAGATTCTGAGAGTAGCATATGCCAAAAGTATCCTGGGTCCTGGATCAGGAACATCGGGACCTTCCCAATCAAGCAGTCTTGCAGCTGCTGCAATTGAGGCTGCAACATTTTCTCAACAGTATGATGCTGTTGGATGGGCTCCACGAGAATACAATCCTGATGACAAACAATCTGCTGGACAAGTGCAAGCTGGCACAGAAACTGCAGTTCAGCAGGATGGCCTGGCTCCTCAATCAGGCTTTGTTTGGGATGAAGCATCTGGTTATTACTATGATGCTGCTTCTGGGTTTTACTATGATGGGAATACTGGTCTTTATTATGATGGTAAGGATGGGATTTGGTATTCATATGACCATCAAACACAGCAATACATCCCTTGTTCTGATCAAACTGAGAGTAAAAGGCCTGATAACCAATCTGAACCTTCCAAGGCGTCTGATGGTTCCAGCACTAAAAAAGTGGTGATTTCTGCACCAGCGGCAACTGTTCCATCAGTTGAGAAGCCAGCTTCATTGCCGGATGCAGTCCGGGCTGCTGCAACAGCTGCCATAGCTGCAGAAAAGAAAGAAAAAGAAAAATTAAAGGAGATAAAGCTTGCATCAAAAAGCAGTATTCTGGCTAACAAAAAGAAAATGAATAATGTCTTGACAATGTGGAAACAGAGGAGTCATGAGGGGCAGGCTACTCGTGTGACTCTGGAAGACAATCAGTCATCTTTATTGGCAGATGATAGGTCCTATTCCTCTGGAAATTCCACAAAGAGTAAGTTCAGAACCGAGACTTCAGCTGCATCAGAGAGCAATACAGGCAATCCAGGGATCCCTACTGCATCAGCTGCCCAAACTATTGCTTTCGATTCTCAGGTCCAGCCTCGGCCTGTGAGTAATAGTCTTGGGGGTCCTTTGAAGGGGGTTATTAGGGGTTTTGGGAGAGGGGTTGTTAAAGCAGATGCTTATCATTCAGGGTCTTCAGCTGCAGCTAATGGTGCTTCAAGTTTGCCAACAACAAAATTAGATGCACTGACTGGTGCAACTCCCTTTAGGACAGATGCCTCTGCCCTGGGTTCATATACAGCATCTGTGGTTGGTGTAAGTGGCAGAAGAAGGTTTTCGGAAATGCCACATTCTGCTTCAAATCAGAAAGAACAACCTCAAAATACCTACAGGGATCGTGCAGCTGAGAGGAGAAATTTGTATGGTTCGTCGTCTTCTCTTGGGGATAATTTGGCTGAACTTTCACCTGGGGATTCAAATCAAGATTTTGCATCAAGGAAGGGTGATCCGATGCCTTTTCCTCCTGGGGTTGGTGGAGGACGTGTGGTTGGAGACGCTGACCTTGATACTTTCGAGGTTATTACAGCAGATAAAGCAATTGATGAGAACAATGTTGGCAATCGGATGCTCCGCAACATGGGATGGCATGAAGGCTTGGGATTAGGGAAGGATGGAAGTGGAATGATAGAGCCCGTCCAAGCGCAAGCCATGGATAGTAGAGCAGGACTTGGGAGTCACCAGAAGAAGTTGGACCCTGGCCTTGAGGGGCAGGCAGGGGATAGTTACAAGACGCTGGTTCATAAGAAAGCACTCGCCAGGTTCCGTGAAATGTCTTAG 3348 0.4573 MEDWKISCEKDLYVFEDSSYEEEDPGQRGVIVGKATGCCLQEMDPDRYGLHQGWDNNSALEGYGAVHEPNFRVGDSYDERRFIDEKYSRDSIYQRNAFPRDVLERETYPPPGPAVGHWGQSKRRGYDEDYPLDRDSRRPQRPYYDSYHQIDAFRDHDIDTYAEFDKLHDGYAGMESYVDRGYDKPARFGGHDRDAYDDYGYRSRVSHHRREDSREQDYDHGRHSYDSDYERGRRDGNWRRHESHDRDHDKRCLSREKDLNPHRRHERSHSRSRSRSHSRSHSHSHSHSHSRSRSRSHGYDDRPRSRSPRGQSRGRSYREDSYTSSRYDRSEKHKDREVKCQREHYYVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVGAAQTMMDKLGDDGLVIDGRKLLFEYSSKPTGGPGGQEGAMRLGRNHKNIRVPSDWMCTICGYINFARRTSCYQCNEPRTEDAPAADITLSNPTASGKKGLEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATRALEATNGTALEKNGQILRVAYAKSILGPGSGTSGPSQSSSLAAAAIEAATFSQQYDAVGWAPREYNPDDKQSAGQVQAGTETAVQQDGLAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGKDGIWYSYDHQTQQYIPCSDQTESKRPDNQSEPSKASDGSSTKKVVISAPAATVPSVEKPASLPDAVRAAATAAIAAEKKEKEKLKEIKLASKSSILANKKKMNNVLTMWKQRSHEGQATRVTLEDNQSSLLADDRSYSSGNSTKSKFRTETSAASESNTGNPGIPTASAAQTIAFDSQVQPRPVSNSLGGPLKGVIRGFGRGVVKADAYHSGSSAAANGASSLPTTKLDALTGATPFRTDASALGSYTASVVGVSGRRRFSEMPHSASNQKEQPQNTYRDRAAERRNLYGSSSSLGDNLAELSPGDSNQDFASRKGDPMPFPPGVGGGRVVGDADLDTFEVITADKAIDENNVGNRMLRNMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSHQKKLDPGLEGQAGDSYKTLVHKKALARFREMS 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01314 1115 MobiDBLite consensus disorder prediction 627 650 - -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 266 292 - -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 976 999 - -
Bach12g01314 1115 Gene3D - 316 451 IPR012677 -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 947 1009 - -
Bach12g01314 1115 Coils Coil 756 776 - -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 293 337 - -
Bach12g01314 1115 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 509 589 IPR000504 GO:0003723
Bach12g01314 1115 SUPERFAMILY RNA-binding domain, RBD 507 597 IPR035979 GO:0003676
Bach12g01314 1115 ProSiteProfiles G-patch domain profile. 1039 1085 IPR000467 GO:0003676
Bach12g01314 1115 MobiDBLite consensus disorder prediction 187 265 - -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 635 650 - -
Bach12g01314 1115 ProSitePatterns Zinc finger RanBP2-type signature. 458 477 IPR001876 -
Bach12g01314 1115 SMART zf_4 456 480 IPR001876 -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 951 965 - -
Bach12g01314 1115 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 351 431 IPR000504 GO:0003723
Bach12g01314 1115 Gene3D - 490 613 IPR012677 -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 187 337 - -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 707 732 - -
Bach12g01314 1115 Pfam G-patch domain 1040 1081 IPR000467 GO:0003676
Bach12g01314 1115 SMART G-patch_5 1037 1083 IPR000467 GO:0003676
Bach12g01314 1115 SUPERFAMILY Ran binding protein zinc finger-like 452 484 IPR036443 -
Bach12g01314 1115 CDD OCRE_SUA_like 655 706 IPR035623 -
Bach12g01314 1115 Gene3D - 452 484 - -
Bach12g01314 1115 Pfam OCRE domain 657 707 IPR041591 -
Bach12g01314 1115 SMART rrm1_1 352 427 IPR000504 GO:0003723
Bach12g01314 1115 SMART rrm1_1 510 585 IPR000504 GO:0003723
Bach12g01314 1115 MobiDBLite consensus disorder prediction 121 142 - -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 102 142 - -
Bach12g01314 1115 PANTHER RNA-BINDING PROTEIN 237 1112 - -
Bach12g01314 1115 ProSiteProfiles Zinc finger RanBP2 type profile. 454 483 IPR001876 -
Bach12g01314 1115 MobiDBLite consensus disorder prediction 821 856 - -
Bach12g01314 1115 SUPERFAMILY RNA-binding domain, RBD 267 429 IPR035979 GO:0003676
Bach12g01314 1115 CDD RRM1_RRM2_RBM5_like 507 587 - -
Bach12g01314 1115 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 353 423 IPR000504 GO:0003723
Bach12g01314 1115 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 511 576 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01314 Bach-Chr12 9197236 9204676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01314 350 573 Eukaryotic Initiation Factors Gene Family AT2G36660 25.498 1.33e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01314 K13094 - gmx:100777686 1537.32