Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01307 ATGTCCTTACAATCCACTGAGATGCTCCAGCAGCGCAAGCCTGCAACTCAGAGTGCCCTTTCTGGGGATGTGTGTTTTTACAGTAACCCAATATGCAAAGATAGGAGAAAATCTCACAAAAAGCTAGTGAGGATCATACTCACTGACCATGACGCTACTGATACTGACTCTTCTAGTGATGAAAAGCAAGAAAGCTCAGTGAGATTCCGAAGAGTTAAGAGGCAGGTTACCCAGATCAGCATGGAACTTTCTTTCACAGATTCCCCTGCCTCTTCTCCCTCTTGTTCCTCCTCCTCCTCCTCTGCTAAACAGGACCCAACCCATCTTAAGAGGCCCAAGAAATTACCCAATTACGATGCCCCCTCTCGGCGCCAAAACAAGTTCAGGGGCGTTCGCCAGCGGCCGTGGGGCAAATGGGCCGCCGAGATCCGGGACCCAATCCGAAGGAAACGGGTCTGGCTAGGAACATTCGACACGGCGGAGGAAGCTGCCACCGTGTACGATAAGGCTGCGCTGAAGCTAAAGGGTCCTGACGCCGTTACCAACTTCCCCAGCACCATGCTGACGGAGGTGGAAACGGAGACGCCGGCGGAAGTTAGCAGTCCAAGCACCGACGGTTTCATCTCCTCCGACACGGTTGCCTCACCCACCTCCGTCCTGCCTTACGACGGCGAATCAACGCCGTTCAACGGTTTCTGTTACGGCGACGTCGATGCATTCGGTTTCGAAATTGATGTGCCGTTAAGTGTGCCGGACATGAATATGATGCTGTCAAGTCAACAGTTCGGAAAGGAAGAATTCGGCGAGTTTGACATCGACGATTTTTTCTCGTGGCCCAACTGA 843 0.5255 MSLQSTEMLQQRKPATQSALSGDVCFYSNPICKDRRKSHKKLVRIILTDHDATDTDSSSDEKQESSVRFRRVKRQVTQISMELSFTDSPASSPSCSSSSSSAKQDPTHLKRPKKLPNYDAPSRRQNKFRGVRQRPWGKWAAEIRDPIRRKRVWLGTFDTAEEAATVYDKAALKLKGPDAVTNFPSTMLTEVETETPAEVSSPSTDGFISSDTVASPTSVLPYDGESTPFNGFCYGDVDAFGFEIDVPLSVPDMNMMLSSQQFGKEEFGEFDIDDFFSWPN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01307 280 ProSiteProfiles AP2/ERF domain profile. 127 184 IPR001471 GO:0003700|GO:0006355
Bach12g01307 280 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 40 197 - -
Bach12g01307 280 MobiDBLite consensus disorder prediction 81 131 - -
Bach12g01307 280 MobiDBLite consensus disorder prediction 106 120 - -
Bach12g01307 280 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Bach12g01307 280 PRINTS Ethylene responsive element binding protein signature 150 166 IPR001471 GO:0003700|GO:0006355
Bach12g01307 280 CDD AP2 127 184 IPR001471 GO:0003700|GO:0006355
Bach12g01307 280 FunFam Ethylene-responsive transcription factor 2 126 185 - -
Bach12g01307 280 SMART rav1_2 127 190 IPR001471 GO:0003700|GO:0006355
Bach12g01307 280 MobiDBLite consensus disorder prediction 81 105 - -
Bach12g01307 280 SUPERFAMILY DNA-binding domain 127 185 IPR016177 GO:0003677
Bach12g01307 280 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
Bach12g01307 280 PIRSF PTI6 16 280 IPR017392 GO:0003700
Bach12g01307 280 MobiDBLite consensus disorder prediction 52 71 - -
Bach12g01307 280 Gene3D AP2/ERF domain 126 186 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01307 Bach-Chr12 9121607 9122449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01307 41 222 AP2-EREBP Transcription Factor Family AT4G27950 46.774 3.41e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach12g01307 AP2 4.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01307 K13434 - gmx:100800489 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01307 12 9121607 9122449 Bach3g01012 3 20600274 20601089 BWGD
Bach12g01307 12 9121607 9122449 Bach12g01307 12 9121607 9122449 ECH