Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01282 ATGGGTCCTGGTCATGGAGAAGTGGTACTAGCAGAAGAAGAAGAACTAGGAGATAACGTGAAGGGAGAGAAAGCTTTCAATAACACGACGGTGCTGCCATGGACGAAGCAGATAACAATCAGGTCTCTGGTGACCAGCTTTGTTTTGAGCATTGTCTTCAACTTTATTGTCTCCAAGCTTAATCTCACCACCGGAGTTATACCGTCACTTAATGTCGCCGCGGGGTTGCTGGGTTTCGCCGTCGTGAAGTCCTACACAAAGATGCTCAAAAGCTGTAGCCTTCTCTGGCAACCATTCACTCGCCAAGAGAATACTGTCATCCAAACCTCTGTGGTTGCCTCCTCCGGCATTGTTTTTAGCAGTGGGACTGCAAGTTATCTACTTGGGATGAGTCCACATATTGCAGCTCAAGCAGATGGAGGGAATACACCAATTAATTCAAAGAGCCCCTCCCTTGGTTGGATGTTTGCATTTCTCTTTTCTATTAGCTTTGTGGGCTTGTTTGTCTCAATTTTTTCTTTCACACAGATGATGATTTTGAAGTACAAGCTAACGTACCCTAGTGGGACTGCCACAGCACATCTCATCAACAGCTTCCACACCCCAAAAGGAGCAAACCTAGCCGAGAAACAAGTTTCTATGCTCTTCAGAAGCTTCTGTTTCAGCTTTGCATTCGCCTTTTTCCAGTGGTTTTTCGCCGCCAGTGACGATTGTGGGTTTGTCAATTTTCCCACATTTGGTCTCCAAGCCTATAATCAGAAGTTTTACATTGATTTCTCATCTACATACATTGGTGTTGGAATGATCTGTCCTTACATGGTAAATGTATCTTTGCTAATTGGAGCAATAGTCTCATGGGGGATTATATGGCCATGGATTGCTACCAAGAGTGGGAGCTGGTACCCTGCTGGTTACACAGTGCTTGCTGTCATTTCCATCTTAGCAGTACCTCACATCTTCCCCCAATTGAGATGGTACCATGTGTTGGTGGCTTATCTCATTGCTCCAAGTTTGGCCTTCTGCAATGCCTATGGCTGTGGCCTCACTGACTGGTCTCTGGCCTCTAACTATGGCAAAATAGCCATACTTATTTTCAGTGGCTGGGTTGGCCTTGACCATGGAGGTGTAATTGTTGGTCTTGCTTCCTGTGGTGTCATGATGAGCATTGTTTCCACTGCTTCTGATTTAATGCAGGACTTCAAAACTGGGTATCTGACCCTGGCTTCGCCTCGCTCTATGTTCTTTAGCCAAGTTTTGGGGACAGCCATGGGTTGCCTCGTGACACCATTGATCTTCTGGTTTTTCTACAAAGCCTACTCAATTGGTGATCCTGAAGGGTCATACCCTGCACCTTACGGGCTAATGTCCCGAGGGATCTCACTTCTTGGAGTAGAGGGTGTGTCTCCTCTTCCCCAAAACTGCCTCTCATTAGCTGCAATCTTCTTCTTTGCTGCTATTGGGATTAACATCATACGCGAGGTAATGGCGCGCTGTGAACCAGATATAGGGATATATAGGTTCATTCCAAACCCCTTGTGCATGGCCATTCCATTCTATCTTGGTGGGTACTTTGCCATTGACATGTGCATTGGGAGCTTGATTTTGTTCATATGGGAGCAGAAGAACAAGCCCAAGGCAAAAGAATTTGCGCCTGCCTTGGCATCTGGGCTCATCTGTGGAGATTCATTGTGGGGTGTTCCTGCTGCTATACTTTCTCTTGCTGGTGCTAAAGCCCCTATTTGCATGAAGTTTCTAACTTCTACCATTAATGAAAAGGTTGATGCTTTCTTGAGCAGAGTTTTGGGTACGGTGTTGCACATGAGTTCGGAAATCATGACCTCTGCTGCTCATGACCTTACTGGTAATGAAGCTAATGAGCCGCAGAAGCAGTCAGAGTCACAGGTTCACTCTTCATCTGCCAACAGAATTAGTCATCCTGGTATTGCTACCCAGAATGTTCAGTATGCAACACCTCCTCAGCTTGGAACTGGGCATGCTATGGCACCATCTGTTTACCCATATCCGGATCCTTACTATAGAAGCATCTTTGCGCCTTATGAAACGCAGCCTTATCCCCCACAGCCATATGGTGGACAGCCAATGGTCCATCTTCAACTCATGGGGATTCAACAAGCCGGTGTTCCCCTACCAACTGATGCAGTTGAGGAGCCTGTGTTTGTCAATGCAAAACAGTATCATGGCATATTAAGACGGAGGCAGTCTCGTGCTAAAGCAGAATCCGAAAACAAAGCTATCAGGAACAGGAAGCCGTACTTGCATGAATCTCGACATTTGCATGCATTGAGAAGAGCAAGAGGATGTGGAGGTCGATTTCTGAATGCAAAGAAAGATGACAAACAACAAAATGAGGTGGCATCGACCAACGAGTCACAATCCAATATCAGTCCCAATTCTGATAAAAACGATATTGCTACATCTGATAGGACATCCTAA 2454 0.4584 MGPGHGEVVLAEEEELGDNVKGEKAFNNTTVLPWTKQITIRSLVTSFVLSIVFNFIVSKLNLTTGVIPSLNVAAGLLGFAVVKSYTKMLKSCSLLWQPFTRQENTVIQTSVVASSGIVFSSGTASYLLGMSPHIAAQADGGNTPINSKSPSLGWMFAFLFSISFVGLFVSIFSFTQMMILKYKLTYPSGTATAHLINSFHTPKGANLAEKQVSMLFRSFCFSFAFAFFQWFFAASDDCGFVNFPTFGLQAYNQKFYIDFSSTYIGVGMICPYMVNVSLLIGAIVSWGIIWPWIATKSGSWYPAGYTVLAVISILAVPHIFPQLRWYHVLVAYLIAPSLAFCNAYGCGLTDWSLASNYGKIAILIFSGWVGLDHGGVIVGLASCGVMMSIVSTASDLMQDFKTGYLTLASPRSMFFSQVLGTAMGCLVTPLIFWFFYKAYSIGDPEGSYPAPYGLMSRGISLLGVEGVSPLPQNCLSLAAIFFFAAIGINIIREVMARCEPDIGIYRFIPNPLCMAIPFYLGGYFAIDMCIGSLILFIWEQKNKPKAKEFAPALASGLICGDSLWGVPAAILSLAGAKAPICMKFLTSTINEKVDAFLSRVLGTVLHMSSEIMTSAAHDLTGNEANEPQKQSESQVHSSSANRISHPGIATQNVQYATPPQLGTGHAMAPSVYPYPDPYYRSIFAPYETQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKAIRNRKPYLHESRHLHALRRARGCGGRFLNAKKDDKQQNEVASTNESQSNISPNSDKNDIATSDRTS 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01282 817 NCBIfam OPT family oligopeptide transporter 299 570 IPR004813 GO:0035673
Bach12g01282 817 MobiDBLite consensus disorder prediction 778 817 - -
Bach12g01282 817 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 303 586 IPR045035 GO:0035673
Bach12g01282 817 PRINTS CCAAT-binding transcription factor subunit B signature 755 778 IPR001289 GO:0003700|GO:0006355
Bach12g01282 817 PRINTS CCAAT-binding transcription factor subunit B signature 724 746 IPR001289 GO:0003700|GO:0006355
Bach12g01282 817 MobiDBLite consensus disorder prediction 791 811 - -
Bach12g01282 817 SMART cbf3 720 781 IPR001289 GO:0003700|GO:0006355
Bach12g01282 817 Pfam OPT oligopeptide transporter protein 37 305 IPR004813 GO:0035673
Bach12g01282 817 Pfam OPT oligopeptide transporter protein 299 571 IPR004813 GO:0035673
Bach12g01282 817 ProSiteProfiles NF-YA/HAP2 family profile. 721 781 IPR001289 GO:0003700|GO:0006355
Bach12g01282 817 MobiDBLite consensus disorder prediction 621 642 - -
Bach12g01282 817 ProSitePatterns NF-YA/HAP2 subunit signature. 726 746 IPR018362 GO:0003677|GO:0016602
Bach12g01282 817 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 723 778 IPR001289 GO:0003700|GO:0006355
Bach12g01282 817 Gene3D - 721 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01282 Bach-Chr12 8924491 8931653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01282 612 817 CCAAT-HAP2 Transcription Factor Family AT1G30500 58.937 4.06e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bach12g01282 OPT 3.3e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01282 - - qsa:O6P43_026098 489.574