Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01279 ATGACACTTTCTATGCACAAAGATTCAGCAAACAAACAAATGGATACCAGCAAGTATGTGAGGTATACACCTGAGCAGGTTGAGGCCTTAGAGAGGGTCTATTCAGAATGCCCAAAGCCTAGCTCTTTGAGAAGGCAGCAGCTCATTAGGGAGTGTCCTATACTATCTAATATTGAACCCAAACAGATCAAAGTGTGGTTTCAGAATCGCAGATGTCGTGAAAAGCAGAGGAAGGAAGCTTCACGTCTTCAGTCAGTGAATAGAAAGCTAAGTGCCATGAATAAGTTATTGATGGAAGAGAATGACCGTCTGCAGAAGCAGGTCTCACAGTTGGTTTATGAAAATGGATACGTGAAAACCCAGCTAAATACCACATCTGCAACTACCACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAGCAGCACCAACAGCAAAACCCAACACCTCAGCATCTCCAGAGGGATGCTAATAACCCAGCTGGTCTTCTCGCTATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCAACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGTATCGTTGCTGTTTCCCGCAACTCCAGTGGAGTAGCAGCACGAGCCTGTGGCCTTGTGAGCCTAGAGCCTACGAAGGTAGCCGAGATTCTTAAAGATCGTCCATCATGGTATCGTGACTGCCGCTGCCTTGATGTCTTGAGCATAATCCCCACGGGCAATGGGGGCACATTGGAGCTCATGTATATGCAGACTTATGCGCCTACAACATTGGCAGCAGCACGTGACTTTTGGACATTAAGATACACTACAAGCTTGGAAGATGGAAGTCTAGTGATATGTGAGAGGTCATTGACTTCTTCAACTGGTGGACCCACAGGGCCTCCTCCTTCAAACTTCGTAAGAGCCGAAGTGCTTCCTAGTGGCTATTTAGTTAGACCCTGTGAGGGTGGTGGATCCATTATTCACATTGTTGATCACGTTGATTTAGATGTTTGGAGTGTTCCTGAAGTTCTCAGGCCCCTCTATGAATCAGCTAAAATCCTGGCTCAGAAAATGACTATTGCTGCCTTGCGGCATATAAGACAAATTGCACAAGAAACAAGTGGAGAAATTCAATATGGTGGTGGTCGACAGCCTGCTGTTTTAAGGACATTTAGTCAGAGACTTTGTCGGGGATTCAATGATGCTGTGAATGGTTTTGTGGATGATGGTTGGTCTTTGATGGGAAATGATGGAGTGGAAGATGTGACAATAGCCATAAACACATCTCCCAACAAATTCTTTGGTTCCCATTACCAAGCATCAATGTTCCCTGCATTTGGAGGTGGGGTGCTGTGTGCCAAGGCATCAATGCTGTTACAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGTTCAGAGTGGGCTGATTATGGAGTTGATGCATACTCTGCTGCATCTCTTAAGGCTAGTCCTTATGCAGTTCCTTGTGCAAGGCCTGGTGGCTTCCCTAGCAGTCAGGTCATTTTACCACTTGCTCATACTATTGAGCATGAGGAGTTTTTAGAGGTAGTTCGTATAGAGGGTCATGCATTTTCCCCTGAAGATGTTGCTCTGGCGCAGGATATGTATCTCCTGCAGCTGTGCAGTGGAGTTGATGAGAATGCCATTGGAGCTTGTGCGCAGCTTGTGTTTGCACCTATTGATGAGTCATTTGCGGATGATGCTCTTTTACTGCCATCTGGTTTTCGTGTCATACCCCTGGATACTAAAACAGATGATCCAGCTGTAACTAGGACATTAGATTTGGCCTCTACACTTGAAGTAGGTTCTGGTAATGCTCGTCGGACTGGTGAAGCTGATTTAAATTGTTACAACCTTAGGTCAGTCCTAACTATTGCGTTCCAATTTACGTTTGAGAACCATTTGCGGGACAATGTGGCTGCTATGGCTCGCCAATATGTGCGTAGTGTTGTTGGCTCTGTTCAGAGGGTTGCCATGGCAATTGCTCCCTCCCGGCTCAGCACCCATATGGAGCCCAAGTCTCTTCCTGGTTCTCCAGAGGCTCTTACTCTGGCTCGATGGATCAGCAGAAGCTACAGGATCCACACTGGGGGAGAGCTCTTTCGAATTGACTCCTCGGCAAATGATGCCATTTTGAAGCAACTTTGGAACCATTCAGATGCAATCATGTGCTGCTCTGTGAAAACTAATGCATCTCCTGTGTTCACCTTTGCAAACCAGGCTGGTCTTGACATGCTTGAGACTACTCTGGTTGCCCTCCAAGATATAATGCTTGATAAAGTTCTTGATGAAGGTGGTAGGAAGGTTCTCTGCTCTGAATTCTCCAAGATAATGCAACAGGGATTTGCATACCTGCCAGCAGGAGTCTGTGTATCCAGTATGAATAGGCCAGTGTCATACGAGCAAGGCGTTGTATGGAAAGTACTCAACGATGATGATTCCAATCACTGCTTGGCCCTTATGTTCATGAACTGGTCTTTTGTTTGATGGCTAAAACCATTACTAAGATACTTCCTGTATTAAGTTATATATGAGTACTCAAGTACCAGGTATTGCCAGAGGACATAAACAACATATTAGTGGGCAGGATTTGATGAATCCTATGGTTCACATAAGCTTGTAGCTTTGCTCTGTGACAATGCTTCTATCTGTCTATATTGACTTTTTGAGCACTCTACTTTTATCATCTTTTGTGACTTGGATGGAACTGGTGGGGAGTTAATGTATGGTATGACTTATTGGCTTATTGCCCATGTTATGAG 2816 0.4542 MTLSMHKDSANKQMDTSKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYVKTQLNTTSATTTDNSCESVVMSGQQHQQQNPTPQHLQRDANNPAGLLAIAEETLAEFLSKATGTAVNWVQMIGMKPGPDSIGIVAVSRNSSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLDVLSIIPTGNGGTLELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPPSNFVRAEVLPSGYLVRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESAKILAQKMTIAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGNDGVEDVTIAINTSPNKFFGSHYQASMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALAQDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDTKTDDPAVTRTLDLASTLEVGSGNARRTGEADLNCYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTHMEPKSLPGSPEALTLARWISRSYRIHTGGELFRIDSSANDAILKQLWNHSDAIMCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEGGRKVLCSEFSKIMQQGFAYLPAGVCVSSMNRPVSYEQGVVWKVLNDDDSNHCLALMFMNWSFV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01279 846 Coils Coil 83 114 - -
Bach12g01279 846 SMART HOX_1 15 81 IPR001356 GO:0003677
Bach12g01279 846 Pfam START domain 167 374 IPR002913 GO:0008289
Bach12g01279 846 ProSiteProfiles START domain profile. 157 385 IPR002913 GO:0008289
Bach12g01279 846 Pfam MEKHLA domain 701 845 IPR013978 -
Bach12g01279 846 SUPERFAMILY Homeodomain-like 18 80 IPR009057 -
Bach12g01279 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 846 IPR044830 GO:0003700
Bach12g01279 846 CDD homeodomain 18 78 IPR001356 GO:0003677
Bach12g01279 846 CDD bZIP 70 109 - -
Bach12g01279 846 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Bach12g01279 846 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Bach12g01279 846 Gene3D - 9 85 - -
Bach12g01279 846 MobiDBLite consensus disorder prediction 136 157 - -
Bach12g01279 846 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Bach12g01279 846 SUPERFAMILY Bet v1-like 167 378 - -
Bach12g01279 846 Gene3D - 199 384 IPR023393 -
Bach12g01279 846 CDD START_ArGLABRA2_like 161 377 - -
Bach12g01279 846 SMART START_1 166 376 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01279 Bach-Chr12 8898451 8905603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01279 5 846 Homeobox Transcription Factor Family AT2G34710 80.592 0.0 1407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach12g01279 START 6.3e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01279 K09338 - cave:132170336 1536.55