Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01277 ATGTTGGGTGGGTTGTATGGGGACCTCCCTCCTCCCTCTTCTGCTGAAGAGGAGAAATCTAGCAACACCAATGTATGGTCAAGCAGCACGAAGATGGCTCCGGCTACTCTGCGAAAGCCGGCTTCGGTTTTCGCACCTCCACAAACAGTTCTGCGATCTCAAAGTAAAGTCAAAACAGTGAATTCTTCAGTACCCAAAACAGTGACATCAACGCCCGTGGCCGTAGCACCGCCACCGGTAGTGGCCGATGATGTGGCACAACCGCACCCAGCTCTTGTGGGTGTCCAATCGACGGTGATGGAGGAGTATGACCCGGCTAGACCGAATGACTATGAAGAATATAGGAAGGAGAGGAAGAGGAAGGCTAGGGAGGCGGAGATGATGAAAGAGCTTGAAAAGAGACGGCAAGAGGAGGAAGAGAGGGAGAGGAGGGAGAGAGAAGAGAGAGAGAGGGAGAGAGATAGGGAAAGGGAATACGGCGATTCAAGGTTGAATATTTCAGGTGAGGAGGCATGGAGAAGGCGTGCAGCAATGAGTGGAGCAGCTCCACGGTCGCCGTCTCCGCCGAGTACCGCAGACGGTTTCACTATTGGGAAGTCAGAAACTGGCGGATTGGGTCTTGGTGCTGGTGGGCAAATGACTGCAGCTCAGAGAATGATGGCAAAGATGGGATGGAAACAGGGGCAAGGGCTTGGGAAGCAGGAGCAAGGAATTACTACTCCTTTGATGGCCAAGAAAACAGATAGAAGAGCTGGAGTTATTGTGAATGCTAGTGATAATAAGCCCGAGAAGAAACTGAAGAGTGTGAACTTCAATGGACCACCTACACGGGTGCTGTTGCTTAGAAACATGGTGGGTCCTGGCGAGGTAGATGATGAGTTGGAAGAGGAGGTAGCATCAGAATGTGCCAAGTATGGAACCGTAACTAGGGTGCTGATATTTGAGATAACAGAGCCAAATTTCCCTCCAATTGAAGCAGTGAGAATCTTTGTGCAGTTTGAAAGATCCGAAGAAACAACTAAAGCTCTTGTCGACCTTGATGGTCGATATTTTGGAGGTAGAGTGGTGCGTGCCACATTTTACGATGAGGAGAGATTTGGCCGGAATGAGTTAGCTCCGATGCCCGGAGAAATTCCTGGCTTCTCTTAAAAGAACACATCTGTGATGTCGGGAAGGTTCTGATTTCTTGTCGGACAAGGAATTGGTTTTGAACACTGCATTACGTGACAGTTAAGTGATTTAGTATTACTAGGTTCATCTGTATTCAAAATTATGTAACAGTAACAAAGGGTTGCTGCTTAGTCCCATATTGCTGTCACATGAACATGTTGATGGTTCCTTTGAGGACTCGAATCATCAATTATTTCTGTTCTCCCTTATAGCAAGTGTTCGATTACTT 1399 0.4796 MLGGLYGDLPPPSSAEEEKSSNTNVWSSSTKMAPATLRKPASVFAPPQTVLRSQSKVKTVNSSVPKTVTSTPVAVAPPPVVADDVAQPHPALVGVQSTVMEEYDPARPNDYEEYRKERKRKAREAEMMKELEKRRQEEEERERREREERERERDREREYGDSRLNISGEEAWRRRAAMSGAAPRSPSPPSTADGFTIGKSETGGLGLGAGGQMTAAQRMMAKMGWKQGQGLGKQEQGITTPLMAKKTDRRAGVIVNASDNKPEKKLKSVNFNGPPTRVLLLRNMVGPGEVDDELEEEVASECAKYGTVTRVLIFEITEPNFPPIEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERFGRNELAPMPGEIPGFS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01277 382 PIRSF SPF45 3 378 IPR040052 GO:0045292
Bach12g01277 382 MobiDBLite consensus disorder prediction 15 35 - -
Bach12g01277 382 ProSiteProfiles G-patch domain profile. 212 258 IPR000467 GO:0003676
Bach12g01277 382 FunFam Putative splicing factor 45 276 362 - -
Bach12g01277 382 Gene3D - 273 371 IPR012677 -
Bach12g01277 382 Coils Coil 111 157 - -
Bach12g01277 382 SUPERFAMILY RNA-binding domain, RBD 280 365 IPR035979 GO:0003676
Bach12g01277 382 SMART G-patch_5 210 256 IPR000467 GO:0003676
Bach12g01277 382 CDD RRM_UHM_SPF45 275 371 IPR034653 -
Bach12g01277 382 MobiDBLite consensus disorder prediction 105 170 - -
Bach12g01277 382 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 277 363 IPR000504 GO:0003723
Bach12g01277 382 PANTHER SPLICING FACTOR 45 SPF45 1 373 IPR040052 GO:0045292
Bach12g01277 382 SMART rrm2_1 278 359 IPR003954 GO:0003676
Bach12g01277 382 MobiDBLite consensus disorder prediction 95 210 - -
Bach12g01277 382 MobiDBLite consensus disorder prediction 47 70 - -
Bach12g01277 382 MobiDBLite consensus disorder prediction 1 82 - -
Bach12g01277 382 Pfam G-patch domain 215 254 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01277 Bach-Chr12 8867332 8869886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01277 218 266 C2H2 Transcription Factor Family AT5G26610 48.214 5.07e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01277 K12840 - qsa:O6P43_013116 504.597