Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01272 ATGGATGATTCAGAGGGAGTCCTCAACTTCGACTTCGAGGGCGGGCTTGATGCTGCTCCGCCCAACCCCACCGCGACGGGACCTGTGGTCCAGTCTGATTCTTCTGCTGCAGCTAACGGTGGCGCTATTGGAACCGCTGCCGCACCGGCCACCGATCATGCTGCAGGAAATATCCCCGGGCGACGGAGCTTTCGTCAAACGGTGTGCCGGCACTGGCTTCGTAGCCTTTGTATGAAGGGCGATGCCTGCGGCTTCTTACATCAGTATGACAAGTCCCGGATGCCCGTATGCCGGTTTTTCAGATTGTACGGGGAGTGCCGCGAGCAGGATTGCGTGTATAAGCATACGAATGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGCCCCAATGGTCCTGATTGCCGGTATAGGCATGCAAAGACACCTGGACCTCCGCCTCCTGTTGAAGAGGTCCTTCAAAAGATCCAGCATTTATATTCTTACAATTACAATGCATCTAACAAATTTTATCAACAAAGGGGCTCTGGCCATCCTCAACAAGCTGAGAAATCCCACTTTCCACAAGGTCCAAATCCTACAATTCAAGATGTGTCTGGAAAGCCATTAACTGCAGAGTCGGGTAATGTCCAGCAGCAGCAACAAGTTCCACAGTCACAGCAGCAGGTTAGCCAGAACCAAAGCCAAAACCTTCCTAATGGGCAGCCCAATCAATCAAACCAAGCCGCGACACCTTTACCTCAAGGAATATCTAGGTATTTTATAGTTAAAAGTTGCAACCGGGAAAATTTGGAGCTATCAGTACAACAAGGTGTATGGGCAACTCAAAGAAGCAACGAAGCTAAACTGACTGAGGCCTTTGATTCAGTGGAAAATGTGATATTGATTTTCTCAGTCAACCGAACTCGACATTTCCAGGGTTGTGCAAAGATGACATCCAGAATTGGTGTGTCTGTTCCCGGGGGAAACTGGAAATATGGACATGGAACTGCACATTACGGGAGGAATTTTTCAGTTAAATGGTTAAAGTTATGTGAGCTGTCCTTCCACAAAACTAGGCATTTAAGGAATCCATACAACGAAAACTTACCAGTGAAGATAAGTAGAGATTGTCAGGAACTGGAGCCCTCTATTGGGGAACAGTTGGCGTCCTTACTTTATCTTGAGCCTGATAGTGAACTCATGGCTGTCTCGTTAGCAGCAGAGTCTAAACGTGAAGAAGAAAAAGCAAAGGGAGTCAATCCAGATGAAGGCGGAGAAAATCCAGATATTGTCCCATTTGAGGACAATGAAGAAGAGGAAGAAGAAGAAAGTGATGAAGAGGAAGAGAACTTTGGCCCTGGTCTTGGGCCAGCTGCTCAAGGAAGAGGCAGGGGCAGAGGTATGATGTGGCCTCCCCACATGGCTATGGGACGAGGAGCCAGACCTATGCCTGGAATGCAGGGTTTTCCCCCAGTAATGATGGGTGAGGGATTGTCCTATGGTCCTGTTACACCTGATGGCTTTGGTATGCCAGATCTTTTTGGTATGGGCCCTCGCGGTTTTGCTCCATATGGCCCTAGGTTCTCTGGTGATTTTGCAGGCCCTCCAGCAACCATGATGTTTCGTGGGCGACCTTCACAACCTGGGATGTTTCCTGGTGCTGGGTTTGGGATGATGATGAATCCCGGACGTGCCCCGTTTATGGGGGGCATGGGGGTTCCAGGAACAAATCCATCTCGCCCCGGTAGGCCAGTTGGTATGCCTCCAATGTTTCCACCACATCTGCCGCCACTTTCTCAGAATACCAACCGTATGGGAAAGAGGGATCAAAGAACTAATGACCGGAATGACAGGTATGGTTCAGGATTAGAGCAGGGTAAGGGTCAAGACTTGGCCGGTACAAATGGTGGACCTGATGATGATATACAGCATCAGCAAGGATACAAGGCACACCAGGAAGATCAATATGCTTCTGTGAACAACTTTAGGAATGAGGAAAGTGAAAGTGAAGATGAGGCTCCACGGCGGTCAAGACATGGAGAGGGCAAAAAGAAGAGGCGCAGCATGGAAGGTGTTGGCACTTAACTCAGGTTCTAATCACTAGCAAATGCCATTCAACAAGCACGAGAATAAAAGATTAACTAACTAGGAACCACTCTCTAATGTGCCCCTTTTT 2164 0.4843 MDDSEGVLNFDFEGGLDAAPPNPTATGPVVQSDSSAAANGGAIGTAAAPATDHAAGNIPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKTPGPPPPVEEVLQKIQHLYSYNYNASNKFYQQRGSGHPQQAEKSHFPQGPNPTIQDVSGKPLTAESGNVQQQQQVPQSQQQVSQNQSQNLPNGQPNQSNQAATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLTEAFDSVENVILIFSVNRTRHFQGCAKMTSRIGVSVPGGNWKYGHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAVSLAAESKREEEKAKGVNPDEGGENPDIVPFEDNEEEEEEESDEEEENFGPGLGPAAQGRGRGRGMMWPPHMAMGRGARPMPGMQGFPPVMMGEGLSYGPVTPDGFGMPDLFGMGPRGFAPYGPRFSGDFAGPPATMMFRGRPSQPGMFPGAGFGMMMNPGRAPFMGGMGVPGTNPSRPGRPVGMPPMFPPHLPPLSQNTNRMGKRDQRTNDRNDRYGSGLEQGKGQDLAGTNGGPDDDIQHQQGYKAHQEDQYASVNNFRNEESESEDEAPRRSRHGEGKKKRRSMEGVGT 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01272 690 ProSiteProfiles Zinc finger C3H1-type profile. 117 144 IPR000571 GO:0046872
Bach12g01272 690 Gene3D ph1033 like domains 232 391 - -
Bach12g01272 690 ProSiteProfiles Zinc finger C3H1-type profile. 63 90 IPR000571 GO:0046872
Bach12g01272 690 MobiDBLite consensus disorder prediction 424 446 - -
Bach12g01272 690 MobiDBLite consensus disorder prediction 25 39 - -
Bach12g01272 690 MobiDBLite consensus disorder prediction 172 246 - -
Bach12g01272 690 MobiDBLite consensus disorder prediction 566 690 - -
Bach12g01272 690 MobiDBLite consensus disorder prediction 577 592 - -
Bach12g01272 690 MobiDBLite consensus disorder prediction 12 42 - -
Bach12g01272 690 MobiDBLite consensus disorder prediction 603 617 - -
Bach12g01272 690 SMART c3hfinal6 119 143 IPR000571 GO:0046872
Bach12g01272 690 SMART c3hfinal6 91 117 IPR000571 GO:0046872
Bach12g01272 690 SMART c3hfinal6 63 89 IPR000571 GO:0046872
Bach12g01272 690 CDD YTH 254 388 IPR007275 GO:0003723
Bach12g01272 690 FunFam Cleavage and polyadenylation specificity factor 30 kDa subunit 59 119 - -
Bach12g01272 690 Gene3D - 59 120 - -
Bach12g01272 690 SUPERFAMILY CCCH zinc finger 63 93 IPR036855 GO:0046872
Bach12g01272 690 MobiDBLite consensus disorder prediction 660 690 - -
Bach12g01272 690 ProSiteProfiles YTH domain profile. 253 388 IPR007275 GO:0003723
Bach12g01272 690 MobiDBLite consensus disorder prediction 402 465 - -
Bach12g01272 690 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 33 677 IPR045168 -
Bach12g01272 690 MobiDBLite consensus disorder prediction 402 418 - -
Bach12g01272 690 Pfam YT521-B-like domain 253 387 IPR007275 GO:0003723
Bach12g01272 690 MobiDBLite consensus disorder prediction 645 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01272 Bach-Chr12 8831827 8839038 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach12g01272 YTH 1.3e-18 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01272 K14404 - gmx:100802826 1087.4