Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01255 ATGGCTCAATCAGCTGAACTGTCGTCATCTTTAAGCTTTACTTCGTCTTCTCATTTATCAAATGGCTCAGTTAACCACAACATATGCTCTTCTGATGGCCCTGATCCTGCACCTAACCTTGAAGCAACCAGTTTAAGTAAGCTCAGCTCTACTTTGGAGCAGCTTTTAGTCGATTCTGATAGTAGTTATAGTGATGCCGACATCATTGTTGAAGGAGTTCCAGTTAGTGTTCACCGTTGTATTCTGGCCTCTAGGAGTAAGTTTTTCAATGAATTATTCAAGAGAGGTAAGGGATCTTCAGAGAAAGAAGGCAAATTAAAGTATCACATGAGTGATTTGTTGCCATACGGCAAGGTTGGATATGAAGCTTTCCTTATATTCTTGGGCTATATATATACCGGAAAACTGCAGCCCTTTCCCATGGAGGTGTCAACATGCGTTGACGATGCATGTGCCCATGATGCTTGTCGACCTGCAATTAACTTTGCGGTGGAGTTGATGTATGCTTCTTCCACTCTCCAAATACCTGAGTTGGTTTCACTTTTCCAGCGACGCCTTCTTAACTTTGTAGGGAAGGTTCTTGTGGAAGATGTCATCCCAATCCTTATTGTTGCTTTTCATTGTCAGTTGAGTCAACTTATCACTCAATGCATTGATAGGGTGGCACGGTCAGACCTTGACCATATCTCAATGGAGAAAGAGCTTCCTCTTGAACTCTCGGAGAAAATCATATTGCTCCGTCGCAACCCCCAGGATGATGATGAAAATAATGCTTCTCTAGTGGATCCATTGCGTCAAAAGAGAATCAGTAGAATACACAAGGCGCTGGACTCAGATGATGTTGAGCTTGTTAAGCTTCTGTTAACTGAGTCGGATATAACCTTGGATGAAGCGAATGCTCTCCATTATGCTGCAGCCTACTGTGATCCTAAGGTTGTTTCTGAGGTACTAGGTTTGGGACTTGCTGATGTCAACCTTCGAAATTCTCGTGGCTACACTGTCCTTCACATTGCTGCCATGCGTAAGGAACCTTCAGTTGTAGTATCCCTTCTTACAAAAGGGGCTTTTGCATCAGAATTGACTTTTCATGGTCAGAGTGCTGTTAGCATCTGCAGGAGGTTGACAAAGCCAAAGGATTACCGTGCAAAAACTGAACAGGGGAAGGAAACAAATAAAGATCGAATATGCATTGATGTTCTTGAAAGAGAAATGAGGAGGAATCCAATGGCTGGCGATGCTTCTATATCTTCCCACAGCATGGCTGATGATCTGCACATGAAGCTGCTACACCTTGAGAACAGAGTTGCATTTGCGAGATTATTCTTCCCTACGGAAGCTAAACTAGCTATGGACATTGCTCATGCTGAGACAACAACCGAGTTTGCAGGTCTTTCCGCTTCAAAAGGTTCTACTGGGAATTTCAGGGAGGTTGATCTAAACGAGACTCCCATAGTGCAAAACAAAAGACTTCTTTCTAGGATGGAAGCCCTCATGAAAACAGTGGAAATGGGGCGACGGTATTTTCCTCATTGCTCAGATGTGCTGGATAAGTTCACGGAGGATGACCTGCCTGATTTGTTTTACCTTGAGAAAGGCACCCAAGAAGAGCAGAGAATCAAGAGGATGCGTTTCATGGAGCTTAAAGAAGATGTTCAAAGGGCTTTTAACAAGGACAAGGCAGAGTTTACTCGCTCTGGCATTACATCTTCGTCTAGCTATCATCTGTCAAAGAGACTGTAA 1740 0.4339 MAQSAELSSSLSFTSSSHLSNGSVNHNICSSDGPDPAPNLEATSLSKLSSTLEQLLVDSDSSYSDADIIVEGVPVSVHRCILASRSKFFNELFKRGKGSSEKEGKLKYHMSDLLPYGKVGYEAFLIFLGYIYTGKLQPFPMEVSTCVDDACAHDACRPAINFAVELMYASSTLQIPELVSLFQRRLLNFVGKVLVEDVIPILIVAFHCQLSQLITQCIDRVARSDLDHISMEKELPLELSEKIILLRRNPQDDDENNASLVDPLRQKRISRIHKALDSDDVELVKLLLTESDITLDEANALHYAAAYCDPKVVSEVLGLGLADVNLRNSRGYTVLHIAAMRKEPSVVVSLLTKGAFASELTFHGQSAVSICRRLTKPKDYRAKTEQGKETNKDRICIDVLEREMRRNPMAGDASISSHSMADDLHMKLLHLENRVAFARLFFPTEAKLAMDIAHAETTTEFAGLSASKGSTGNFREVDLNETPIVQNKRLLSRMEALMKTVEMGRRYFPHCSDVLDKFTEDDLPDLFYLEKGTQEEQRIKRMRFMELKEDVQRAFNKDKAEFTRSGITSSSSYHLSKRL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01255 579 SUPERFAMILY POZ domain 49 188 IPR011333 -
Bach12g01255 579 Pfam BTB/POZ domain 61 142 IPR000210 GO:0005515
Bach12g01255 579 ProSiteProfiles Ankyrin repeat region circular profile. 330 355 - -
Bach12g01255 579 ProSiteProfiles Ankyrin repeat profile. 330 355 IPR002110 GO:0005515
Bach12g01255 579 SMART BTB_4 64 190 IPR000210 GO:0005515
Bach12g01255 579 SUPERFAMILY Ankyrin repeat 243 374 IPR036770 -
Bach12g01255 579 PANTHER REGULATORY PROTEIN NPR3 10 574 IPR044292 GO:0009862|GO:2000022|GO:2000031
Bach12g01255 579 Gene3D Potassium Channel Kv1.1; Chain A 38 222 IPR011333 -
Bach12g01255 579 FunFam Regulatory protein NPR3 38 222 - -
Bach12g01255 579 Pfam NPR1/NIM1 like defence protein C terminal 372 572 IPR021094 -
Bach12g01255 579 ProSiteProfiles BTB domain profile. 64 140 IPR000210 GO:0005515
Bach12g01255 579 Pfam Ankyrin repeats (3 copies) 273 355 IPR002110 GO:0005515
Bach12g01255 579 FunFam regulatory protein NPR3-like 264 404 - -
Bach12g01255 579 CDD BTB_POZ_NPR_plant 47 190 - -
Bach12g01255 579 SMART ANK_2a 267 295 IPR002110 GO:0005515
Bach12g01255 579 SMART ANK_2a 330 359 IPR002110 GO:0005515
Bach12g01255 579 SMART ANK_2a 296 326 IPR002110 GO:0005515
Bach12g01255 579 Gene3D - 264 404 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01255 Bach-Chr12 8741267 8743721 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bach12g01255 NPR1_like_C 3.8e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01255 K14508 - gmx:100217338 950.658