Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01254 ATGGCGACTTCAGTTCCGGCGACCCAGAACAAGATCCGATGGGGTGAGCTGGAGGAGGACGATGGAGAGGATCTGGACTTTTTGCTACCGCCGCGACAGGTGATAGGTCCAGATGAGAACGGCATAAAAAAGGTGATTGAGTACAAATTCGATGAAGATGGCAATAAGGTGAAAATTACTACTATCACTCGCATTCGTAAGCTCGCTAATGCTCGCCTCACTAAGCGTGCCATTGAGAGGCGATCCTGGGCCAAGTTTGGCGATGCTGTTCACGAGGACGTTGGTAGCAGGCTTACCATGGTTTCCACTGAGGAAATCCTCCTTGAGCGTCCTAGACCTCCTGGCAGCAAGGTGGAAGAACCAAAGGCTGCTGGAGACCCATTCCAGAAAGTTGGTGCAGGTGCTGTTCTCATGGTTTGTAGGACTTGTGGGAAGAAGGGTGATCACTGGTCTGCAAGGTGTCCTTACAAGGATCTTGCCCCGCCAGCTGAGGGATTTATTGATAAGCCTGCTGTATCAGAAGCTGCAACCTCTGCTTCTGGTCCTAAAACATATGTTCCTCCTGGTCTGAGAGGAGGAGTTTCAGATAGGTCTGCACCTGACATGCGAAGAAGGAACGATGAAAATTCTGTCCGGGTAACCAATCTCTCTGAGGATACAAGAGAGCCTGATTTGCTTGAGCTGTTCCGTCCTTTTGGTGCTGTTAGCAGAGTCTATGTTGCTGTTGATCAAAAGACTGGCATGAGCAGAGGATTTGGTTTTGTAAACTTTGTAAACAGGGAAGATGCGCAGAGAGCCATTAACAAGCTCAATGGATATGGTTACGACAATCTAATCCTTAGAGTTGAATGGGCGACCCCAAGAACAAACTAA 873 0.4868 MATSVPATQNKIRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYKFDEDGNKVKITTITRIRKLANARLTKRAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRPPGSKVEEPKAAGDPFQKVGAGAVLMVCRTCGKKGDHWSARCPYKDLAPPAEGFIDKPAVSEAATSASGPKTYVPPGLRGGVSDRSAPDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01254 290 CDD eIF3G 40 158 IPR024675 -
Bach12g01254 290 SMART rrm1_1 210 283 IPR000504 GO:0003723
Bach12g01254 290 CDD RRM_eIF3G_like 210 285 IPR034240 -
Bach12g01254 290 Gene3D - 172 290 IPR012677 -
Bach12g01254 290 PIRSF Transl_init_eIF-3_RNA-bind 3 290 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bach12g01254 290 SUPERFAMILY RNA-binding domain, RBD 197 289 IPR035979 GO:0003676
Bach12g01254 290 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 11 289 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bach12g01254 290 MobiDBLite consensus disorder prediction 174 207 - -
Bach12g01254 290 Pfam Eukaryotic translation initiation factor 3 subunit G 33 159 IPR024675 -
Bach12g01254 290 FunFam Eukaryotic translation initiation factor 3 subunit G 173 290 - -
Bach12g01254 290 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 20 286 - -
Bach12g01254 290 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 211 277 IPR000504 GO:0003723
Bach12g01254 290 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 209 287 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01254 Bach-Chr12 8739519 8740893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01254 10 288 Eukaryotic Initiation Factors Gene Family AT3G11400 67.093 5.47e-148 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01254 K03248 - qsu:112022532 491.5