Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01252 ATGGAATGGGCTGGAGGTGGCGGTTTTAGGAGTAATGGTAGAGGAACTGGGGAAGGGTGGCGTGGCAGAGAACGGGGAGCTGGATACGGCGTTTACAGCGGAAGAAGGTCGGATCAGCCGACATGGCGGCATCAAGGTAGGTATGGCGGTGGTCATGGCGGAAGAGTAGTTCAGTATTCGCAAGAGGAGCCTCAACCACCACCATCAGCATGGGGTCGTGGTGTTCCTAATCAACGATCTTGGGGTCTTTCCAATGAGGGTTCGAGCAGTGGCAGTTATCCGAGAGGAGGAGGAGGTAATGCAGTTTGGCCGAGTCCTCCTATCAGTAATACCGTTCCAGTTCCGTCCAGTGGGAGTTCTGAGTCCGCGCTAGTTGAAAAGCTCAATGAACTACAAATATCGCCAGAAAATACGAACAAAATAAAAATGCCTGTTAAAAGACCTGATAGAGGTGGCACAATAGCAATTCGAACTAGCAACCTCCGTGTCAATCACTTTCCTGTTGGGTTCAGTACACAGAGTGTAATAATACATTACAATGTTGATGTGACACCGGAGTTGCCTCCAAAACATGGTCGGTCAAAGAAAATCTCTAAATCTGATCTGTCTATGATCAGAGAGAAATTATTTTCTGATTATCCTCAGAGATTGCCATTGAAAATGACAGCATATGATGGACAGAAGAACATATTCAGTGCAGTTCCACTGCCGGACGAAACATTTAAAGTGGTTATTTCTAGAGGAGAGGATGAGAAAATCGTTTCATATATGGTTACTCTAACATTTGTCAATAAACTTGATCTTCGTAAGTTGAAGGACTATCTTAGTGGTCATGTTCTGTCAATTCCCCGGGATATATTACAAGGGTTGGACTTGGTAATGAAGGAGAATCCAGCTAGGTGCACAGTTTCCGTGGGACGAAATTTTTATTCCACAAGGGAAGCACAGGATATTCAGCCAGGCGTATTGGCAATAAGAGGTTTTCAACCTTGCCTCAAGCCTACATCTCAGGGTTTGTCCTTATGTCTGGACTATTCTGTTTTGGCATTCCGAAAGCAAATGCCAGTTTTGGATTTCCTTCATGAGCATAATGAAAAATTTAACTTGAATGAATTTGGGAGGTTTAGGAGATATGTTGAAGAGACGCTGGTCGGCCTGAAAGTTAATGTGACTCATCGCAGAACCAAACAAAAATACACCATTACAAGGTTAACATCAATGAATACAAGGTTCGTCACTTTCCCTGTTGAAGGCCTAGAGGGCCAGAATCCACCAAGGAATATCAGTCTTATTGAGTTTTTCCAAGAAAAATATGGAGTGGACATTGAATACAAAGATATTCCTTGCTTAGATTTGGGAAAAGGAAAAAAGATAAACTATGTGCCTATGGAGTTCTGTATCTTGGTTGAGGGTCAAAGATATCCAAAAGAGCATTTAAGTTATAGTGGTGGGAAAATGTTGAAAAGAATTTCACTGGCCGATCCAAATGAGAGGGAGAATATAATACAGAGGATGGTGCAGTCAGAAGATGGACCTTGCGGTGGTGGTATCATTCAAAACTTTGGAATGAATGTTAGCATGAATATGACAAAGGTTGAAGGACGTGTGATTGGGCCTCCAGAATTGAAGTTGGGTAAACCAAATGGTGAGATCATGAAGATACTTTTGAACCCAGAAAAATGTAACTGGGATCTACTTGAAAAGTCAATGGTGGAAGGCAAACCAGTTGAGTGTTGGGGCATCCTTGACTTCACCAGAAATGAACGTGAACGTGATAGATTAGACGTCAATAAATTTATTAGGAATCTTACTGGCAAGTACAAAAAGTTGGGTATTGGCATGAACAATCCTGTTATTTGTGAATCTTTTCCAATGAGGGCACTTTCAAATGTGAATTTGCTCTCTGAATTACTTGAGGGAATTAACGAGAAGGCTCATAAAAGTGGTAATGGTAGACTGCAATTTCTTTTGTGTGTGATGACAAGGAAGGATCCAGGTTACAAGTACCTAAAGTGGATTTCTGAGACCAAAGTTGGTATAGTTACACAATGTTGTTTGTCCCGAAATGCTAATGAAGGGAAAGACCGATATCTTACTAATCTTTCCCTCAAGATCAATGCTAAACTTGGAGGCAGTAATGTGGAGCTGGGTAATGGGCTCCCTTATTTTAATGGCGAAGGACCTGTTATGTTTGTGGGGGCTGATGTCAATCATCCTGGTTCTAGGGACACTAGGAGTCCTTCAATTGCTGCTGTAGTTGCAACTGTCAACTGGCCTGCTGCAAATCGCTATGTAGCACGTGTTTGCCCTCAGTATCATCGTATTGAGAATATTTCAAACTTTGGGAAAATTTGCCTTGAGCTTGTTCAATGCTATGTCCAATTAAATAACGTCAGGCCAACAAAAATTATTATTTTTCGTGATGGAGTGAGTGTGGGCCAGTTTGATATGGTTTTGAATGAAGAGCTATCAGATTTGAAGAAAGCATTCCAGAGCATTGATTTCTTCCCAACAGTTACGCTTATTGTGGCTCAAAAGCGACATCAAACTCGGCTATTTCCTGAGAGTAAATGGAGGGAGGGGGGTCCCAATGGCAATGTATTTCCAGGAACAATTGTGGACACAAAAATTACACACCCTTTTGAGTTCGACTTCTACCTTTGTAGCCACCATGGAAGCCTAGGAACAAGCAAGCCCACACACTATCATGTCTTGTGGGATGAGAACAGGTTTACATCTGATGCATTGCAGAAGCTCATTTATGATATGTGCTTCACCTTTGCCAAGTGCACCAAACCTGTGTCTTTAGTACCTCCAGTGTATTACGCTGACCTTGCTGCTTACAGAGGACGATTATACCATGAAGTATTGACTGAGATGCAATCTCCAGACTCATCAGCATCTTTATTATCATCATCTGCAGCTTCTCCATCGATTTCCTCTACTGCTTCTCTTGATCTGAAGACTTATAGGTTGCATGTTGACATGAATGACAAAATGTTCTTCATATGA 3012 0.4203 MEWAGGGGFRSNGRGTGEGWRGRERGAGYGVYSGRRSDQPTWRHQGRYGGGHGGRVVQYSQEEPQPPPSAWGRGVPNQRSWGLSNEGSSSGSYPRGGGGNAVWPSPPISNTVPVPSSGSSESALVEKLNELQISPENTNKIKMPVKRPDRGGTIAIRTSNLRVNHFPVGFSTQSVIIHYNVDVTPELPPKHGRSKKISKSDLSMIREKLFSDYPQRLPLKMTAYDGQKNIFSAVPLPDETFKVVISRGEDEKIVSYMVTLTFVNKLDLRKLKDYLSGHVLSIPRDILQGLDLVMKENPARCTVSVGRNFYSTREAQDIQPGVLAIRGFQPCLKPTSQGLSLCLDYSVLAFRKQMPVLDFLHEHNEKFNLNEFGRFRRYVEETLVGLKVNVTHRRTKQKYTITRLTSMNTRFVTFPVEGLEGQNPPRNISLIEFFQEKYGVDIEYKDIPCLDLGKGKKINYVPMEFCILVEGQRYPKEHLSYSGGKMLKRISLADPNERENIIQRMVQSEDGPCGGGIIQNFGMNVSMNMTKVEGRVIGPPELKLGKPNGEIMKILLNPEKCNWDLLEKSMVEGKPVECWGILDFTRNERERDRLDVNKFIRNLTGKYKKLGIGMNNPVICESFPMRALSNVNLLSELLEGINEKAHKSGNGRLQFLLCVMTRKDPGYKYLKWISETKVGIVTQCCLSRNANEGKDRYLTNLSLKINAKLGGSNVELGNGLPYFNGEGPVMFVGADVNHPGSRDTRSPSIAAVVATVNWPAANRYVARVCPQYHRIENISNFGKICLELVQCYVQLNNVRPTKIIIFRDGVSVGQFDMVLNEELSDLKKAFQSIDFFPTVTLIVAQKRHQTRLFPESKWREGGPNGNVFPGTIVDTKITHPFEFDFYLCSHHGSLGTSKPTHYHVLWDENRFTSDALQKLIYDMCFTFAKCTKPVSLVPPVYYADLAAYRGRLYHEVLTEMQSPDSSASLLSSSAASPSISSTASLDLKTYRLHVDMNDKMFFI 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01252 1003 ProSiteProfiles PAZ domain profile. 354 470 IPR003100 GO:0005515
Bach12g01252 1003 ProSiteProfiles Piwi domain profile. 655 955 IPR003165 GO:0003676
Bach12g01252 1003 MobiDBLite consensus disorder prediction 78 95 - -
Bach12g01252 1003 MobiDBLite consensus disorder prediction 1 123 - -
Bach12g01252 1003 Pfam Argonaute linker 1 domain 304 352 IPR014811 -
Bach12g01252 1003 SUPERFAMILY Ribonuclease H-like 646 955 IPR012337 -
Bach12g01252 1003 Pfam Piwi domain 656 951 IPR003165 GO:0003676
Bach12g01252 1003 SMART PAZ_2_a_3 354 488 IPR003100 GO:0005515
Bach12g01252 1003 Pfam PAZ domain 360 479 IPR003100 GO:0005515
Bach12g01252 1003 Pfam N-terminal domain of argonaute 159 294 IPR032474 -
Bach12g01252 1003 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 158 956 - -
Bach12g01252 1003 SMART Piwi_a_2 655 954 IPR003165 GO:0003676
Bach12g01252 1003 SMART DUF1785_2 303 353 IPR014811 -
Bach12g01252 1003 CDD PAZ_argonaute_like 354 469 - -
Bach12g01252 1003 Gene3D - 566 716 - -
Bach12g01252 1003 FunFam Protein argonaute 7 348 474 - -
Bach12g01252 1003 CDD Piwi_ago-like 517 953 IPR045246 -
Bach12g01252 1003 SUPERFAMILY PAZ domain 349 507 IPR036085 GO:0005515
Bach12g01252 1003 Gene3D - 724 1003 IPR036397 GO:0003676
Bach12g01252 1003 Gene3D paz domain 348 474 - -
Bach12g01252 1003 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01252 Bach-Chr12 8724942 8728990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01252 161 955 Eukaryotic Initiation Factors Gene Family AT5G43810 36.495 8.33e-154 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01252 K11593 - qsa:O6P43_015690 1161.36