Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01228 ATGGTCTTATGCTCTTATAATTCCAATTCTTCTTCAGGGTCTGAAATTTCTAGTCTGCTGAATCCGAATTTGCAGACCCTTTGTGCTGCAAATGAGGTTTTGCGAGATGGGTTTCCATCATCGCATTCATTGGTTTTGGATAGTGAGAAGGGAGAGCTGGTGAAGTCTCCAGCAAAAATTGGGGAGAAAGAGGTGTCTGAGGCAAAAGCTTTGGCTGCTTTGAAGAGTCATAGTGAGGCAGAGAGGAGGAGAAGGGAGAGAATCAATGGCCATTTTGATACCCTTCGTCGTCTGGTGCCCTGCACTGAAAAGATGGATAAAGCCACATTACTTGCTGAAGTTATCAGTCAGGTGAAGGAACTGAAGAACAATGCAATGGAAGCAAGCAAAGGTTTTCTAATTCCAATGGATGCTGATGAAGTAAACGTTGAACCATACGAAGATGCAGGAGGAAGTGGGGGATCATTGTCTTATAGGGCATCTGTCTGCTGTGATTACCGACCTGAGCTTCTATCTGATCTAAGACAAACTCTTGAATCTCTGCAACTACAATTGGTGAGTGCAGAAATATCAACTTTGGGAGGCAGAGTGAAGAACGTGTTTGTTTTCACTTGCTGCAAAGGGGAGAGTATTCACATCGAGGCATGCCAACTTCTTGCAAATACCGTTCACAAGGCATTAAGTTCTGTATTGGATAAGGCTGCTGCTAGCTCACTGGAATACTCTCTGAGAACGCCATTTCCAAACAAACGCCGAAGGCTTTGCTTCATGGATACATAGACCTTCTTGTTCATGCTGATGATAGACAGTGCTAGCTGAGCCCGAAAGCATTTCATGTTGAAGGTCCTGCATTTACTAGTATCATATGTTGTAGAAATGTTTGTGTGTGATGAGGAGAATTTGTCGTGTGGACCCAAGCATGTGGCG 927 0.4401 MVLCSYNSNSSSGSEISSLLNPNLQTLCAANEVLRDGFPSSHSLVLDSEKGELVKSPAKIGEKEVSEAKALAALKSHSEAERRRRERINGHFDTLRRLVPCTEKMDKATLLAEVISQVKELKNNAMEASKGFLIPMDADEVNVEPYEDAGGSGGSLSYRASVCCDYRPELLSDLRQTLESLQLQLVSAEISTLGGRVKNVFVFTCCKGESIHIEACQLLANTVHKALSSVLDKAAASSLEYSLRTPFPNKRRRLCFMDT 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01228 259 Coils Coil 111 131 - -
Bach12g01228 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 124 IPR036638 GO:0046983
Bach12g01228 259 SMART finulus 78 127 IPR011598 GO:0046983
Bach12g01228 259 PANTHER TRANSCRIPTION FACTOR BHLH30 38 254 IPR045847 GO:0003700|GO:0006355
Bach12g01228 259 Coils Coil 171 191 - -
Bach12g01228 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Bach12g01228 259 Gene3D - 67 130 IPR036638 GO:0046983
Bach12g01228 259 Pfam Helix-loop-helix DNA-binding domain 76 121 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01228 Bach-Chr12 8547910 8550979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01228 58 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 45.198 5.79e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach12g01228 HLH 8.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01228 - - gmx:100804756 323.168