Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01226 ATGGAATTTCCCAAGAAGCGGAAGACCGAAGAGAACGGGAACACTGATTCTCCGCCGTCCTCCACCGCCATCACCAACCTTTCGCCTGAAGACATCCGTAAGATCCTACAGCCCTTCACTCAGGACCAACTGCTTGAAGTTCTTCAGTCAGCGGCTCTTCGTCACCCAGATGTTTTACAAGATATTCGTTCTGTTGCCGACCGCGATTCCACTTTACGGAAACTCTTCGTCCGTGGCCTCGCCGGAGAAACCACCACGGACACGCTACGCAGTATCTTTTCTTCGTTTGGGGAACTCGATGAGGCCATTGTTATCTTCGATAAAACGACGGGAAAGTCCAAAGGTTATGGCTTTGTAACATTTAAGCACGTTGATGGAGCTTTGCTGGCGCTGAAAGAACCTAGCAAGAAGATTGACGGGAGAATTACGGTGACACAGTATGCTGCTTCGGGGTTGTCGGGTGGCCCCGGCACCAACGGGGCGGCGGCAGCGGCGAGCGATGTTTCTGCAAGAAAAATTTTTGTGGGGAATGTGCCGTTTGATATCACATCAGAGAAGCTGTTGAGTCACTTTCTCATGTATGGGGAAATTGAAGAAGGGCCCCTTGGGTTCGATAAAGGGAGTGGAAAGTCAAAAGGGTTTGCTTTCTTTGTCTATAAGACAGAGGAGGGTGCAAGGGCGTCACTGATCGAGCCTACCAAGATAATTGATGGGCATCAAGTGGTTTGCAAATTGGCCGTGGATAATAAGAAGGGAAAGCCAGGGGGACTTCAGAATCAAACGCCTTCAGGGTTTACAGGAGATGGCATGGTAGCACAGCAACAGCAACCTTTGCCTGGTCCTATGATGGGATTACAATACCATTATCCTGCACCTGGCACATTGCCTGGTAATAATTACGCCTTGCAGGGTGGCGCCGGGTATACTTCTCAGGTTCCATCTTCCTACGGTCCTGGAGGTACCTACACCGGTTCACAGTTTGGTGGGCCACCCTCTGGTGATTACAGTGGGAGGTTGCCCCCAAGTTCTGCTGGATTTGCAGATGGTTCTCATTATGGTTTGACCTCATCTGCACTTCCCTCTCAGCAGCATCAACAGCCCCGGCCAATGCCAAGACTTGCGCCTGGAGGAATGTACCAAGGCATGCCGCCCTACTATTGA 1161 0.5099 MEFPKKRKTEENGNTDSPPSSTAITNLSPEDIRKILQPFTQDQLLEVLQSAALRHPDVLQDIRSVADRDSTLRKLFVRGLAGETTTDTLRSIFSSFGELDEAIVIFDKTTGKSKGYGFVTFKHVDGALLALKEPSKKIDGRITVTQYAASGLSGGPGTNGAAAAASDVSARKIFVGNVPFDITSEKLLSHFLMYGEIEEGPLGFDKGSGKSKGFAFFVYKTEEGARASLIEPTKIIDGHQVVCKLAVDNKKGKPGGLQNQTPSGFTGDGMVAQQQQPLPGPMMGLQYHYPAPGTLPGNNYALQGGAGYTSQVPSSYGPGGTYTGSQFGGPPSGDYSGRLPPSSAGFADGSHYGLTSSALPSQQHQQPRPMPRLAPGGMYQGMPPYY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01226 386 PANTHER GEO13361P1-RELATED 163 364 - -
Bach12g01226 386 SUPERFAMILY RNA-binding domain, RBD 60 157 IPR035979 GO:0003676
Bach12g01226 386 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 173 240 IPR000504 GO:0003723
Bach12g01226 386 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 75 141 IPR000504 GO:0003723
Bach12g01226 386 SMART rrm1_1 74 146 IPR000504 GO:0003723
Bach12g01226 386 SMART rrm1_1 172 244 IPR000504 GO:0003723
Bach12g01226 386 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 171 248 IPR000504 GO:0003723
Bach12g01226 386 MobiDBLite consensus disorder prediction 317 386 - -
Bach12g01226 386 Gene3D - 162 276 IPR012677 -
Bach12g01226 386 Gene3D - 4 161 IPR012677 -
Bach12g01226 386 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 73 150 IPR000504 GO:0003723
Bach12g01226 386 MobiDBLite consensus disorder prediction 354 368 - -
Bach12g01226 386 MobiDBLite consensus disorder prediction 1 25 - -
Bach12g01226 386 SUPERFAMILY RNA-binding domain, RBD 156 259 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01226 Bach-Chr12 8530985 8532145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01226 163 353 C2H2 Transcription Factor Family AT2G19380 33.333 3.39e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01226 K12741 - zju:107411269 463.766