Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01211 ATGGATTTCCTTTTCACAACTGTTAGAGCATTTCCAAGATTCTTGTTACTCTTCTATTTTTTATACTCCTTTGTCATCATCAGTGGCTGCAGAGGTCAGGCCACAGGTGGAGACAAGGTTATATCCATTGGTGCAATCATTGATGATAATTCTCGTATTGGTAAAGAACAAAAAGTAGCAATGGAGATTGCAGCTCAAATTTACAATAAAACCTTTAATACCCATAATTTGTCTCTCTATTTTCAGAACCCCACTAAGGAACCCTTGAGAACGATCTCTCTTGCTGAAGAGATGATTAAAATGCAGAAAGTGCAAGTGATAATAGGCATGCAAACATGGCAGCAAGCACTTCTAGTGGCAGATATTGGAAACCAAGCTCAAGTTCCTATCATATCATTTGTAGCACCTGCTATTACCCCACCATTGACGACAATTCGCTGGCCTTTCCTGGTAAGACTTGCTAACAATGGCACTGCATACATAAAATGCATTGCAGACATAGTGCATCATTATGGTTGGCAAAGAGTGGTAGCCATATATGAAGATGATACCTATGGTGGAGACTATGGGATGCTAGCACTCCTTTCTGAGGCCCTCCAAGATGTTGGTTCAATGATAGAGCACCATTTAGCACTTCCACCAATTTCTTCTCTGCCTGATCCGGGAGGAACAGTTCGTGAAGAGCTGCTTATGTTAATGCAAACTACACAATCTCGGGTTTTCATTGTTCTCCAATCATCACTGGAAATGGCCCTTCAATTGTTCAAGGAAGCTTCACTATTGGGACTTGTGGATATAGAATCAGCTTGGATTATCCCAGAGAGCATAACTAATTTGCTGGACTCTGTCAACAACTCTGCTATTTCTTACATGGAAGGAGCTATAGGAATTAAGACTTACTATTCTGAAAATAGCACTGAGTATCAAGACTTCGAATCTGAGTTCAGAAAAAACTTCAGGGCCAAGTATCCTGAGGAAGATAACCGAAACCCGGGATCTTATGCTTCGCAAGCATATGATAGCATTAGAATTGTCACACAAGCAATGGAGAGATTAACTAGTCAAAACAGTAGAGAAAGGACATTTTTAGAAGAAATATTGTCTGTCAATTTCCTTGGTTTAAGTGGAAAAATACAATTTGAAGGACGGCAGCTCTTGCAGAGTCCTATTCTGAGAGTTGTCAATGTAGTTGGGAAGAGTTACAAAGAATTAGACTTTTGGACTCAACAAAATGGGTTCAGCACAACCCTTCCAACAGAACTAGGTGGAGATAATGCAACTGGTAGAGTAGAAGGTTTTTCTGGTATGGTACTTTGGCCTGGGAATTCACAGGTGGTGCCAAAAGGATGGAATATGCCTACTAAAGAAAAGAAAATGAGAATTGCAGTCCCAGGTAGAACCTCATTTTCCAAGTTTGTCAAGGTTGAACACAACGCTGACAATGCAACTCAGCTTAGTGGATTCTGCATTGAAATTTTTGAGAAGGTGATCAAATTTCTGCACTACGATCTGCCATATGACTATCATCCCATCAATGGTACCTATGATGATCTGGTTCAACTTGTTTATAACAAGACTTATGATGCTGTGGTTGGAGACATGACCATACTAACAGACAGATTACCATACGTGGACTTTACTGTGCCATATACAGAATCAGGATTGTCAATGATAGTTCCAGAAAAATCTGAAGAGTCAGCATGGATGTTCACGAAGCCATTCACATGGCAATTGTGGGCGGTAACTGGTGCCATCTTGGTTTACACAATGTTAGTTGTATGGTACCTCGAACGACAGCCCAATCCAGAGTTTCATGGCGATTGGAGAAGCCAGATTAGCACTGCAGTTTGGTTTACCTTCTCCACTCTATTCTTTGCTCATAGGGAGAAAACATACAGCAACTTAACCCGTATGGTGATGGTAGTATGGCTCTTTGTTGTTTTGATTCTAAACTCAAGTTATACTGCTAGTCTTTCTTCAATGCTCACAGTTCAACAGCTGCAGCCAACTATTACAGACATTGAGTGGCTGAAGAGGAACAACATGAAAATTGGTTGTGATCGTGACACATTCCTTTGCTCATATCTTGAAGAAATCGAAAAATTCAAGCGGGAGAACATCATAAATGTTAGTAGTGAATACAACTTTGTTGATGAACTCAGACAAAACCACATAGCAGCAGCGTTTCTTGAACTACCTTATCAAAAAGTATTCATCAATACATACTGCAAGGGATATTCTGGCTCCACACCCACCACAAGATTTGGAGGATTAGGCTTTATGTTCCAGAAAGGCTCCCCAGTGGCCAAAGATGTTTCTGAAGCTATACTGCATCTCGGGGAGCAAGGAGAACTGAAAAAACTAGAAGAGAAATGGTTGAATCCTTCACACCAGTGCTCTACTAGCACAACATCGGAGAGCTTAAAGCTAGGAAGCTTTTGGCTGCTCTATATCATATCTGGTGCCACTTCCACCATTTGCTTTCTGCTTTCTGTCTTCAGGTCACTGAAAACTGGTCAAAAACGTCGAAATGAGGGACAAGAAGGCAATCAGACCACAAGTGAGGTGAGCATTTGGATTAAAGTAGTTGAATTAGCTAAGCAGGTTTACAGCAGAAAGCTCAATAATGCAAGTGAGGCACAAGTAGGGACTGATTGCTCTTCAAGATGGGATGATATTAGCACTAGCAATAGCCCTGAGCATCAGCAGATCAGGGCTTCGCCGGTACCAGAAACCATAGTGCTCTCTTCTCCACCACCAGATGTACAAGTTGGCACTCCTGATAATGGAGTTCAAATAGCAATTCTTGACCATATATAA 2820 0.411 MDFLFTTVRAFPRFLLLFYFLYSFVIISGCRGQATGGDKVISIGAIIDDNSRIGKEQKVAMEIAAQIYNKTFNTHNLSLYFQNPTKEPLRTISLAEEMIKMQKVQVIIGMQTWQQALLVADIGNQAQVPIISFVAPAITPPLTTIRWPFLVRLANNGTAYIKCIADIVHHYGWQRVVAIYEDDTYGGDYGMLALLSEALQDVGSMIEHHLALPPISSLPDPGGTVREELLMLMQTTQSRVFIVLQSSLEMALQLFKEASLLGLVDIESAWIIPESITNLLDSVNNSAISYMEGAIGIKTYYSENSTEYQDFESEFRKNFRAKYPEEDNRNPGSYASQAYDSIRIVTQAMERLTSQNSRERTFLEEILSVNFLGLSGKIQFEGRQLLQSPILRVVNVVGKSYKELDFWTQQNGFSTTLPTELGGDNATGRVEGFSGMVLWPGNSQVVPKGWNMPTKEKKMRIAVPGRTSFSKFVKVEHNADNATQLSGFCIEIFEKVIKFLHYDLPYDYHPINGTYDDLVQLVYNKTYDAVVGDMTILTDRLPYVDFTVPYTESGLSMIVPEKSEESAWMFTKPFTWQLWAVTGAILVYTMLVVWYLERQPNPEFHGDWRSQISTAVWFTFSTLFFAHREKTYSNLTRMVMVVWLFVVLILNSSYTASLSSMLTVQQLQPTITDIEWLKRNNMKIGCDRDTFLCSYLEEIEKFKRENIINVSSEYNFVDELRQNHIAAAFLELPYQKVFINTYCKGYSGSTPTTRFGGLGFMFQKGSPVAKDVSEAILHLGEQGELKKLEEKWLNPSHQCSTSTTSESLKLGSFWLLYIISGATSTICFLLSVFRSLKTGQKRRNEGQEGNQTTSEVSIWIKVVELAKQVYSRKLNNASEAQVGTDCSSRWDDISTSNSPEHQQIRASPVPETIVLSSPPPDVQVGTPDNGVQIAILDHI 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01211 939 Gene3D - 742 801 - -
Bach12g01211 939 Gene3D - 36 160 - -
Bach12g01211 939 MobiDBLite consensus disorder prediction 888 908 - -
Bach12g01211 939 Gene3D - 462 566 - -
Bach12g01211 939 SUPERFAMILY Periplasmic binding protein-like I 36 450 IPR028082 -
Bach12g01211 939 CDD GluR_Plant 457 793 - -
Bach12g01211 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 849 IPR015683 -
Bach12g01211 939 FunFam Glutamate receptor 160 329 - -
Bach12g01211 939 Gene3D - 342 461 - -
Bach12g01211 939 FunFam Glutamate receptor 458 568 - -
Bach12g01211 939 Pfam Ligand-gated ion channel 795 821 IPR001320 GO:0015276|GO:0016020
Bach12g01211 939 CDD PBP1_GABAb_receptor_plant 42 417 IPR044440 -
Bach12g01211 939 SMART GluR_14 458 795 IPR001320 GO:0015276|GO:0016020
Bach12g01211 939 Pfam Bacterial extracellular solute-binding proteins, family 3 480 794 IPR001638 -
Bach12g01211 939 PIRSF IGluLR_plant 9 915 IPR017103 -
Bach12g01211 939 Gene3D - 567 710 - -
Bach12g01211 939 MobiDBLite consensus disorder prediction 888 905 - -
Bach12g01211 939 FunFam Glutamate receptor 567 697 - -
Bach12g01211 939 Pfam Receptor family ligand binding region 59 397 IPR001828 -
Bach12g01211 939 SUPERFAMILY Periplasmic binding protein-like II 436 794 - -
Bach12g01211 939 Gene3D - 161 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01211 Bach-Chr12 8440585 8444279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01211 20 832 Ion Channels AT2G29120 34.279 6.49e-146 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01211 - - gmx:100818619 1221.07