Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01210 ATGGATTTCCTTTTCACAACTGTTAGAGCATTTCCAAGATTCTTGTTACTCTTCTATTTTTTATACTCCTTTGTCATCATCAGTGGCTGCAGAGGTCAGGCCACAGGTGGAGACAAGGTTATATCCATTGGTGCAATCATTGATGATAATTCTCGTATTGGTAAAGAACAAAAAGTAGCAATGGAGATTGCAGCTCAAATTTACAATAAAACCTTTAATACCCATAATTTGTCTCTCTATTTTCAGAACCCCACTAAGGAACCCTTGAGAACGATCTCTCTTGCTGAAGAGATGATTAAAATGCAGAAAGTGCAAGCGATAATAGGCATGCAAACATGGCAGCAAGCACTTCTAGTGGCAGATATTGGAAACCAAGCTCAAGTTCCTATCATATCATTTGTAGCACCTGCTATTACCCCACCATTGACGACAATTCGCTGGCCTTTCCTGGTAAGACTTGCTAACAATGGCACTGCATACATAAAATGCATTGCAGACATAGTGCATCATTATGGTTGGCAAAGAGTGGTAACCATATATGAAGATGATGCCTATGGTGGAGAGTATGGGATGCTAGCACTCCTTTCTGAGGCCCTCCAAGATGTTGGTTCAATGATGGAGCACCATTTAGCACTTCCACCAATTTCTTCTCTTCCTGATCCAGGAGGAACAGTTCGTGAAGAGCTGCTTATGTTAATGCAAACTACACAATCTCGGGTTTTCATTGTTCTCCAATCATCACTGGAAATGGCCGTTCAATTGTTCAAGGAAGCTTCACTATTGGGACTTGTGGATATAGAATCAGCTTGGATTATCCCAGAGAGCATAACTAATTTGCTGGACTCTGTCAACAACTCTGCTATTTCTTACATGGAAGGAGCTATAGGAATTAAGACTTACTATTCTGAAAATAGCACTGAGTATCAAGACTTTGAATCTGAGTTCAGAAAAACTTTCAGGGCCAAGTACCCTGAGGAAGATAACCGAAACCCGGGATCTTATGCTTTGCAAGCATATGATAGCATTAGAATTGTCACACAAGCAATAGAGAGATTAACTAGTCAAAACAGTAGAGAAAGGACATTTTTAGAAGAAATATTGTCTGTCAATTTCCTTGGTTTAAGTGGAAAAATACAATTTGAAGGACGGCAGCTCTTGCAGAATCCTATTCTGAGAGTTGTCAATGTAGTTGGGAAGAGTTACAAAGAATTAGACTTTTGGACTCAACAAAATGGGTTCAACAAAATCCTTCCAACAGAACTAGGTGGCGATAATGCAACTGGTAGAGTAGAAGGTTTTTCTGGTATGGTACTTTGGCCTGGGAATTTACAGGTGGTGCCAAAAGGATGGAATATGCCTACTAAAGAAAAGAAAATGAGAATTGCAGTCCCAGGTAGAACCTCATTTTCCAAGTTTGTCAAGGTTGAACACAAGGCTGACAATACAACTCATGTTAGTGGATTCTGCATTGAAATTTTTGAGAAGGTGATCAAATTTCTGCACTATGATCTGCCATATGACTATTATCCCATCAATGGTACCTACAATGATCTGGTTCAACTTGTTTATAACAAGACTTACGATGCTGTGGTTGGAGACATGACCATACTAGCAGACAGATTACCATACGTGGACTTTACTGTGCCATATACAGAATCAGGATTGTCAATGATAGTTCCAGAAAAATCTGAAGAGTCGGCATGGATGTTCACGAAGCCATTCACATGGCAATTGTGGGCGGTAACTGGTGCCATCTTGGTTTACACAATGTTAATTGTATGGTACCTCGAACGACAGCCCAATCCAGAGTTTCATGGCGATTGGAGAAGCCAGATTAGCACTGCAGTTTGGTTTACCTTCTCCTCTCTATTCTTTGCTCATAGGGAGAAAACATACAGCAAGTTAACCCGTATGGTGATGGTAGTGTGGCTCTTTGTTGTTTTGATTCTAAACTCAAGTTATACTGCTAGTCTTTCTTCAACGCTCACAGTTCAACAGCTGCAGCCAGCTATTACAGACATTGAGTGGCTGAAGAGGAACAACATGAAAATTGGTTGTGATGGTGATTCATTCGTTTGGTCATATCTTGAAGAAGTCGAAAAATTCAAGCGGGAGAACATCATAAATGTTAGTAGTGAATACAACTATGTTGATGAACTCAGACAAAACCACATAGCAGCAGCGTTTCTTGAACTACCTTATGAAAAAGTATTCATCAATACATACTGCAAGGGATATTCTGGGTCCACACCCACCACAAGATTTGGAGGATTAGGCTTTATGTTCCAGAAACGCTCCCCAGTGGCCAAAGATGTTTCTGAAGCTATACTGCATCTCGGGGAGCAAGGAGAACTGAAAAAACTAGAAGAGAAGTGGTTGAATCCTTCACACCAGTGCTCTACTAGCACAACATCGGAGAGTTTAAAGCTAGGAAGCTTTTGGCTGCTCTATATCATATCTGGTGCCACTTCCACCATTTGCTTTCTGCTTTCTGTCTTCAGGTCACTGAAAACTGGTCAACAACGTCGAAATGAGGCACAAGAAGGCAATCAGACCCCAAGTGAGGAGAGCATTTGGATTAAAGTAGTTGAATTAGCTAAGCAGGTTTACAGCAGAAAGCTCAATAATGCAAGTGAGGCACAAGTAGGGACTGATTGCTCTTCAAGATGGGATGATATTAGCACTAGCAATATCAGGGATTCGACGCTACCAGAAACCATAGTGCTCTCTTCTCCGCCACCAGATGTGCAAGTTGGCACTCCTGATAATGGAGTTCAAATAGCAATTCTTGACCATATATAA 2802 0.4086 MDFLFTTVRAFPRFLLLFYFLYSFVIISGCRGQATGGDKVISIGAIIDDNSRIGKEQKVAMEIAAQIYNKTFNTHNLSLYFQNPTKEPLRTISLAEEMIKMQKVQAIIGMQTWQQALLVADIGNQAQVPIISFVAPAITPPLTTIRWPFLVRLANNGTAYIKCIADIVHHYGWQRVVTIYEDDAYGGEYGMLALLSEALQDVGSMMEHHLALPPISSLPDPGGTVREELLMLMQTTQSRVFIVLQSSLEMAVQLFKEASLLGLVDIESAWIIPESITNLLDSVNNSAISYMEGAIGIKTYYSENSTEYQDFESEFRKTFRAKYPEEDNRNPGSYALQAYDSIRIVTQAIERLTSQNSRERTFLEEILSVNFLGLSGKIQFEGRQLLQNPILRVVNVVGKSYKELDFWTQQNGFNKILPTELGGDNATGRVEGFSGMVLWPGNLQVVPKGWNMPTKEKKMRIAVPGRTSFSKFVKVEHKADNTTHVSGFCIEIFEKVIKFLHYDLPYDYYPINGTYNDLVQLVYNKTYDAVVGDMTILADRLPYVDFTVPYTESGLSMIVPEKSEESAWMFTKPFTWQLWAVTGAILVYTMLIVWYLERQPNPEFHGDWRSQISTAVWFTFSSLFFAHREKTYSKLTRMVMVVWLFVVLILNSSYTASLSSTLTVQQLQPAITDIEWLKRNNMKIGCDGDSFVWSYLEEVEKFKRENIINVSSEYNYVDELRQNHIAAAFLELPYEKVFINTYCKGYSGSTPTTRFGGLGFMFQKRSPVAKDVSEAILHLGEQGELKKLEEKWLNPSHQCSTSTTSESLKLGSFWLLYIISGATSTICFLLSVFRSLKTGQQRRNEAQEGNQTPSEESIWIKVVELAKQVYSRKLNNASEAQVGTDCSSRWDDISTSNIRDSTLPETIVLSSPPPDVQVGTPDNGVQIAILDHI 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01210 933 SUPERFAMILY Periplasmic binding protein-like I 36 450 IPR028082 -
Bach12g01210 933 FunFam Glutamate receptor 160 329 - -
Bach12g01210 933 Gene3D - 567 709 - -
Bach12g01210 933 Gene3D - 462 566 - -
Bach12g01210 933 CDD GluR_Plant 457 793 - -
Bach12g01210 933 Gene3D - 36 161 - -
Bach12g01210 933 PIRSF IGluLR_plant 9 906 IPR017103 -
Bach12g01210 933 Pfam Receptor family ligand binding region 59 397 IPR001828 -
Bach12g01210 933 Gene3D - 742 801 - -
Bach12g01210 933 FunFam Glutamate receptor 458 568 - -
Bach12g01210 933 CDD PBP1_GABAb_receptor_plant 42 417 IPR044440 -
Bach12g01210 933 Pfam Ligand-gated ion channel 795 821 IPR001320 GO:0015276|GO:0016020
Bach12g01210 933 SUPERFAMILY Periplasmic binding protein-like II 435 794 - -
Bach12g01210 933 SMART GluR_14 458 795 IPR001320 GO:0015276|GO:0016020
Bach12g01210 933 Gene3D - 340 461 - -
Bach12g01210 933 Gene3D - 162 330 - -
Bach12g01210 933 Pfam Bacterial extracellular solute-binding proteins, family 3 480 794 IPR001638 -
Bach12g01210 933 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 838 IPR015683 -
Bach12g01210 933 FunFam Glutamate receptor 567 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01210 Bach-Chr12 8427852 8431524 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01210 20 832 Ion Channels AT2G29120 33.688 8.37e-142 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01210 - - gmx:100818619 1207.97