Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01208 ATGGATTTCCTTTTCACAACTGTTAGAGCATTTCCAAGATTCTTGTTACTCTTCTATTTTTTATACTCCTTTGTCATCATCAGTGGCTGCAGAGGTCAGGCCACAGGTGGAGACAAGGTTATATCCATTGGTGCAATCATTGATGATAATTCTCGTATTGGTAAAGAACAAAAAGTAGCAATGGAGATTGCAGCTCAAATTTACAATAAAACCTTTAAGACCCATAATTTGTCTCTCTATTTTCAGAACCCCACTAAGGAACCCTTGAGAACTATCTCTCTTGCTGAAGAGATGATTAAAATGCAGAAAGTGCAAGTGATAATAGGCATGCAAACATGGCAGCAAGCACTTCTAGTGGCAGATATTGGAAACCAAGCTCAAGTTCCTATCATATCATTTGTAGCACCTGCTATTACCCCACCATTGACGACAATTCGCTGGCCTTTCCTGGTAAGACTTGCTAACAATGGCACTGCATACATAAAATGCATTGCAGACATAGTGCATCATTATGGTTGGCAAAGAGTGGTAGCCATATATGAAGATGATGCCTATGGTGGAGACTATGGGATGCTAGCACTCCTTTCTCAGGCCCTCCAAGATGTTGGTTCAATGATGGAGCACCATTTAGCACTTCCACCAATTTTTTCTCTTCCTGATCCAGGAGGAACAGTTCGTGAAGAGCTGCTTATGTTAATGCAAACTACACAATCTCGGGTTTTCATTGTTCTCCAATCATCACTGGAAATGGCCGTTCAATTGTTCAAGGAAGCTTCACTATTGGGACTTGTGGATATAGAATCAGCTTGGATTATCCCAGAGAGCATAACTAATTTGCTGGACTCTGTCAACAACTCTGCTATTTCTTACATGGAAGGAGCTATAGGAATTAAGACTTACTATTCTGAAAATAGCACTGAGTATCAAGACTTTGAATCTGAGTTCAGAAAAACTTTCAGGGCCAGCTACCCTGAGGAAGATAACCGAAACCCGGGATCTTATGCTTTGCAAGCATATGATAGCATTAGAATTGTCACACAAGCAATGGAGAGATTAACTAGTCAAAACAGGAGAGAAAGGACATTTTTAGAAGAAATATTGTCTGTCAATTTCCTTGGTTTAAGTGAAAAAATACAATTTGAAGGACGGCAGCTCTTGCAGAATCCTATTCTGAGAGTTGTCAATGTAGTTGGGAAGAGTTACAAAGAATTAGACTTTTGGACTCAACAAAATGGGTTCAACACAACCCTTTCAACAGAACTAGGTGGAGATAATGCAACTGGTAGAGTAGAAGGTTTTTCTGGTATGGTACTTTGGCCTGGGAATTCACAGGTGGTGCCAAAAGGATGGAATATGCCTACTAAAGAAAAGAAAATGAGAATTGCAGTCCCAGGTAGAACCTCATTTTCCAAGTTTGTCAAGGTTGAACACAACGCTGACAATACATCTCAGGTTAGTGGATTCTGCATTGAAATTTTTGAGAAGGTGATCAAATTTCTGCACTATGATCTGCCATATGACTACTATCCCATCAATGGTACCTATAATGATCTGGTTCAACTTGTTTATAACAAGACTTATGATGCTGTGGTTGGAGACATGACCATACTAGCAGACAGATTACCATACGTGGACCTTACTGTGCCATATACAGAATCAGGATTGTCAATGATAGTTCCAGAAAAATCTGAAGAGTCAGCATGGATGTTCACGAAGCCATTCACTTGGCAATTGTGGGCGGTAACTGGTGCCATCGTGGTTTACACAATGTTAGTTGTATGGTACCTCGAACGACAACCCAATCCAGAGTTTCATGGCGATTGGAGAAGCCAGATTAGCACTGCAGTTTGGTTTACCTTCTCCTCTCTATTCTTTGCTCATAGGGAGAAAACATACAACAACTTAACCCGTATGGTGATGGTAGTGTGGCTCTTTGTTGTTTTGATTCTAAACTCAAGTTATACTGCTAGTCTTTCGTCAAGGCTCACAGTTCAACAGCTGCAGCCAACTATTACAGACATTGAGTGGCTGAAGAGGAACAACATGAAAATTGGTTGTGATGGTGACTCATTCGTTTGGTCATATCTTGAAGAAGTCGAAAAATTCAAGCGGGAGAACATCATAAATGTTAGTAGTGATTACAACTTTGTTGATGAACTCAGAGAAAACCACATAGCAGCAGCGTTTCTTGAACTACCTTATGAAAAAGTATTCATCAATACATACTGCAAGGGATATTCTGGCTCCACACCCACCACAAGATTTGGAGGATTAGGCTTTATGTTCCAGAAAGGCTCCCCAGTGGCCAAAGATGTTTCTGAAGCTATACTGCATCTCGGGGAGCAAGGAGAACTGGAAAAACTAGAAGAGAAATGGTTGAATCCTTCACACCAGTGCTCTACTAGCACAACATCGGAGAGTTTAAAGCTAGAAAGCTTTTGGCTGCTCTATATCATATCTGGTGCCACTTCCACCATTTGCTTTCTGCTTTCTGTCTTCAGGTCACTGAAAACTGGTCAACAACGTCGAAATGAGGCACAAGAAGGCAATCAGACCCCAAGTGAGGAGAGCATTTGGATTAAAGTAGTTGAATTAGCTAAGCAGGTTTACAGCAGAAAGCTCAATAATGCAAGTGAGGCACAAGTAGGGACTGATTGCTCTTCAAGATGGGATGATATTAGCACTAGCAATAGCCCTGAGCATCAGCAGATCAGGGCTTCGCCGGTACCAGAAACCACAGTGCTCTCTTCTCCACCACCAGATGTACAAGTTGGCACTCCTGATAATGGAGTTCAAATAGCAATTCTTGACCATATATAA 2820 0.411 MDFLFTTVRAFPRFLLLFYFLYSFVIISGCRGQATGGDKVISIGAIIDDNSRIGKEQKVAMEIAAQIYNKTFKTHNLSLYFQNPTKEPLRTISLAEEMIKMQKVQVIIGMQTWQQALLVADIGNQAQVPIISFVAPAITPPLTTIRWPFLVRLANNGTAYIKCIADIVHHYGWQRVVAIYEDDAYGGDYGMLALLSQALQDVGSMMEHHLALPPIFSLPDPGGTVREELLMLMQTTQSRVFIVLQSSLEMAVQLFKEASLLGLVDIESAWIIPESITNLLDSVNNSAISYMEGAIGIKTYYSENSTEYQDFESEFRKTFRASYPEEDNRNPGSYALQAYDSIRIVTQAMERLTSQNRRERTFLEEILSVNFLGLSEKIQFEGRQLLQNPILRVVNVVGKSYKELDFWTQQNGFNTTLSTELGGDNATGRVEGFSGMVLWPGNSQVVPKGWNMPTKEKKMRIAVPGRTSFSKFVKVEHNADNTSQVSGFCIEIFEKVIKFLHYDLPYDYYPINGTYNDLVQLVYNKTYDAVVGDMTILADRLPYVDLTVPYTESGLSMIVPEKSEESAWMFTKPFTWQLWAVTGAIVVYTMLVVWYLERQPNPEFHGDWRSQISTAVWFTFSSLFFAHREKTYNNLTRMVMVVWLFVVLILNSSYTASLSSRLTVQQLQPTITDIEWLKRNNMKIGCDGDSFVWSYLEEVEKFKRENIINVSSDYNFVDELRENHIAAAFLELPYEKVFINTYCKGYSGSTPTTRFGGLGFMFQKGSPVAKDVSEAILHLGEQGELEKLEEKWLNPSHQCSTSTTSESLKLESFWLLYIISGATSTICFLLSVFRSLKTGQQRRNEAQEGNQTPSEESIWIKVVELAKQVYSRKLNNASEAQVGTDCSSRWDDISTSNSPEHQQIRASPVPETTVLSSPPPDVQVGTPDNGVQIAILDHI 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01208 939 MobiDBLite consensus disorder prediction 885 923 - -
Bach12g01208 939 MobiDBLite consensus disorder prediction 885 928 - -
Bach12g01208 939 FunFam Glutamate receptor 458 568 - -
Bach12g01208 939 SUPERFAMILY Periplasmic binding protein-like II 436 794 - -
Bach12g01208 939 CDD GluR_Plant 457 793 - -
Bach12g01208 939 SMART GluR_14 460 795 IPR001320 GO:0015276|GO:0016020
Bach12g01208 939 Pfam Bacterial extracellular solute-binding proteins, family 3 480 794 IPR001638 -
Bach12g01208 939 Gene3D - 462 566 - -
Bach12g01208 939 Gene3D - 36 160 - -
Bach12g01208 939 SUPERFAMILY Periplasmic binding protein-like I 36 450 IPR028082 -
Bach12g01208 939 Gene3D - 742 801 - -
Bach12g01208 939 Pfam Receptor family ligand binding region 59 397 IPR001828 -
Bach12g01208 939 Gene3D - 161 330 - -
Bach12g01208 939 FunFam Glutamate receptor 160 329 - -
Bach12g01208 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 847 IPR015683 -
Bach12g01208 939 Gene3D - 567 709 - -
Bach12g01208 939 CDD PBP1_GABAb_receptor_plant 42 413 IPR044440 -
Bach12g01208 939 FunFam Glutamate receptor 567 697 - -
Bach12g01208 939 PIRSF IGluLR_plant 9 917 IPR017103 -
Bach12g01208 939 Pfam Ligand-gated ion channel 795 821 IPR001320 GO:0015276|GO:0016020
Bach12g01208 939 Gene3D - 344 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01208 Bach-Chr12 8412732 8416425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01208 20 832 Ion Channels AT2G29120 33.648 4.55e-139 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01208 - - gmx:100818619 1220.68