Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01203 TGGTCCCACTTTGGCCATTTATTCCTAAGATAAATCCAACTCCAGAGCCACTGCACAGAGTCTGCAGGTTCCTTCAAAGGCACCCACCCTCTCAAAACAGAGCAACCTAAGAAATCAAGAACAGAGAAAATCCAAACAATGGAATTAGCCTCCCAAACAGAGTTCCCATTCAATGAGAATGACTCACAGGACATGGTCATCTACCAAGTTCTCAACGAGGCCAATGCTCTCACCACCACCAACGCATTGTCATTCTTCCCCCAAAGGCACCACCACCAAATTGGCCTAGAACCAACCAGGGCCGTCGGAAAGAAGCACTACCGCGGCGTACGGCGCCGTCCCTGGGGGAAATATGCGGCGGAGATTCGTGATTCAGCAAGGCATGGAGCAAGAATATGGCTTGGAACATTTGAAACTGCAGAAGATGCAGCTATGGCTTATGATAGAGCTGCTTTTAGAATGAGAGGTCGTAAAGCCCTTCTTAATTTCCCGGCTGAAATTGTTGCTGCCTCTTCTACGCAATTATCGGTGCCTAGATTCAATAATCAGGATTCTGATTCAAGTACTAGCACTTCTCGTACTGATACTTCAATTGCTACCAGTGGATCACAATCAGAAAGTACACTTAGCACAGCAAGCTAAATGGAATTAGCCTCCCAAACAGAGTTCCCATTCAATGAGAATGACTCACAGGACATGGTCATCTACCAAGTTCTCAACGAGGCCAATGCTCTCACCACCACCAACGCATTGTCATTCTTCCCCCAAAGGCACCACCACCAAATTGGCCTAGAACCAACCAGGGCCGTCGGAAAGAAGCACTACCGCGGCGTACGGCGCCGTCCCTGGGGGAAATATGCGGCGGAGATTCGTGATTCAGCAAGGCATGGAGCAAGAATATGGCTTGGAACATTTGAAACTGCAGAAGATGCAGCTATGGCTTATGATAGAGCTGCTTTTAGAATGAGAGGTCGTAAAGCCCTTCTTAATTTCCCGGCTGAAATTGTTGCTGCCTCTTCTACGCAATTATCGGTGCCTAGATTCAATAATCAGGATTCTGATTCAAGTACTAGCACTTCTCGTACTGATACTTCAATTGCTACCAGTGGATCACAATCAGAAAGTACACTTAGCACAGCAAGCTAAGATTTCAAGCTTTTTCTCAAGGGAGTTGGTATAACACATGAATTTTAGTTTATTTGGATCATATTTCATTACTATGTTTGAAAGTTTAGTTTTTTT 1242 0.4549 MELASQTEFPFNENDSQDMVIYQVLNEANALTTTNALSFFPQRHHHQIGLEPTRAVGKKHYRGVRRRPWGKYAAEIRDSARHGARIWLGTFETAEDAAMAYDRAAFRMRGRKALLNFPAEIVAASSTQLSVPRFNNQDSDSSTSTSRTDTSIATSGSQSESTLSTAS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01203 167 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
Bach12g01203 167 MobiDBLite consensus disorder prediction 132 167 - -
Bach12g01203 167 FunFam Ethylene-responsive transcription factor 2 59 120 - -
Bach12g01203 167 SUPERFAMILY DNA-binding domain 60 120 IPR016177 GO:0003677
Bach12g01203 167 PANTHER DNA-BINDING DOMAIN 47 156 IPR044808 GO:0003700|GO:0009873
Bach12g01203 167 CDD AP2 59 119 IPR001471 GO:0003700|GO:0006355
Bach12g01203 167 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
Bach12g01203 167 Gene3D AP2/ERF domain 59 120 IPR036955 GO:0003700|GO:0006355
Bach12g01203 167 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Bach12g01203 167 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Bach12g01203 167 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01203 Bach-Chr12 8385237 8385974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01203 9 121 AP2-EREBP Transcription Factor Family AT5G47220 51.111 1.24e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach12g01203 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01203 K13433 - qsa:O6P43_012708 195.282