Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01200 AGTTTTCTGATCCAACATCAGAAAATCTTGTAAAGTATGGATCGAGAAAGGAAATTGTTGCTGCTGATACTTCTATTTCAAGTTCTGCTTGTAGCAGCACAGACCACCAGTACTGATGACTCTAAAGGTGTAGCAGGTCTCACTGAAAACTGGGACCAAGAACCACCAAGTTGGGTGGGTTCAGATCCTTGTGGTAGTAACTGGGAAGGAATTCGTTGCAACAATTCAAGAATTATCTCAATAAAATTATCAAGCATGAAACTGTCAGGCACGCTGTCTTCAGAAATCCAGTCAATATCTGAATTAGAAATTTTGGATCTCTCTTTCAACAAGGGATTGACAGGAAGAATTCCAGATGAAATTGGAAATCTGATAAATCTAAATACCCTAATATTGGTTGGTTGTAGTTTCTTTGGCATTATTCCGGCTTCAATTGGAAATCTACAGCAGCTGACTTTTCTAGCTCTGAATTCTAATCAGTTCAGTGGAGAGATTCCACGTACAATTGGTAACCTATCCAACATTGAATGGCTAGATCTTTCTGATAACCAATTCCAAGGAGGTATCCCTGTTTCTGATGATAATGGACCTGGTCTTGATCTGCTACATACTGCACAACACTTTCATTTTGGAAACAATAGACTCTCGGGTCCAGTTCCAACTAAACTTTTCAGCTCAAACATGACACTGATCCATGTGCTTTTTGACAACAATGGATTGAATGGCAGCATTCCTAGTTCCCTTGGACTTGTCAAAACTCTGGAGGTGGTGCGTTTTGATAGGAATCAACTGATTGGGCAAGTGCCTGTAAACTTCAGTTCTCTTGAAAGCCTTACTGAGCTGTACTTATCCAACAATAAGCTGAATGGCTCACTGCCTGATCTTAGTGGACTAAGTCTCACCTATGTGGATTTGAGTAACAACAGTTTTAATGCTTCTGAGATTCCTACTTGGGCTTCAACTTCGCAGTTTATAACAACATTAAATTTAGGAAACACTGGGCTCCAAGGCGACATACCAGTCTCATTATTTTCCCTGCCCAATTTAGAGTCCGTGGTTTTGAGGGACAACCGACTCACTGGCGAGTTAGATATTGGCAGTTTCAGCAACAGCCGTCTGCAAACCATTGATGTGGAGAATAATGAAATAAGTGATTTCAAGCAGAAGAACTTACAAATCAGTGCCACAGTATTACTACTAGGCAACTCAATTTGTTTTGAAACCGGAGCCCAAGAGCAAAGTTACTGCCAAGAGAGGCGATCAAATTTATCGTATTCAACGCCACCAAATCATTGTTCACCACCTTCTCTTTGCATTTCCAATCAGCTTTCCAGCCCCACCTGTAAATGTGCACATCCATATACTGGAACTCTTATTTCCAGAGCTCTTAGTATCTCAAACTTTGGCAACTCAAGTTATTATGTGGCTATTGAGCAGTCTCTGATGAGTACTATGCAATCCCAAAATCTTCCTGTGGATTCAGTTTCCCTGAGTAATTCCTTCAAAAATTCTTCCACGGATTATTTTCATGTGACCTTGAGTTTCTTCCCTTCTCAACAAGATCGTTTCAATAGAACTGGAGTCTCTGGTATAGCTTTTGTGCTTACCAACCAGATTTATAAAGCCCCAGAATTTTTTAACCCTTACTACTTTATTGGTGATGACTATCAATACTATGCAGGGGAATCTTCAACAAAGTCAACAAATGCAGGGGTTATAGCTGGTGCAGTAGTTGGTGTATTTGTCTTTTTGGTGATAGCAGTTCTTGCTGGTATATATGCCTTCCGCCAAAAGAGAAGAGCACAGACAGCAAGAGAGATGAACCCTTTTGTAAACTGGGAACTGAACAAGGATAGTGGTGCTGCTCCTCAGTTGAAAGGAGCAAGATGGTTCTCTTTTGAAGAGCTAAAGAAATACACCAACAATTTCTCCGATGCGAATAATATTGGATCTGGGGGCTATGGAAAGGTTTACCGAGGAGTACTTACCAATGGTGAATTGGTTGCTATCAAACGGGCTGGACAAGGATCATTGCAAGGGGATGTCGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTACATCATAAGAACCTCGTCAGTCTTGTGGGTTTCTGTTTTGAGAAGGGCGAACAAATGCTGGTGTATGAGTATATTGCCAATGGAACATTAATGGATAGTCTTTCAGGAAAATCTGGAATCATGTTAGATTGGATGAAAAGACTAAAAGTAGCCCTCGGTTCAGCCAGGGGTCTAGCCTATCTTCATGAACATGCTAACCCACCAATAATACACAGAGATGTAAAATCAAGCAATATACTACTTGATGATCACCTAAATGCCAAAGTTTCTGATTTTGGTCTCTCCAAACTTATTGTTGACAGTGAAAGGAGCCATGTCACTACTCAAGTCAAAGGAACATTGGGGTACTTGGATCCTGAATACTACATGACACAACAGTTGACCGAAAAGAGCGATGTCTACAGCTTTGGAGTGCTATTGTTGGAATTAATAACAGGAAGAAAGCCAATAGAGCAAGGAAAATACATTGTAAGAGAGGTAGTAAGGGTAATGAATAGGTCAAAAGATTTATACAACCTTCAAGAAATTCTAGACCCTGCCATAATAAAAGCAACAACCCCAAACGGTTTAGAGAAGCTCGTGGATCTGGCATTGAACTGTGTTAAAGAATATGCAGCTGAGAGACCTTCAATGGCTGAAGTGGTGAAAGAGATAGAGAGTATAATGGAACTCGCTGGTTTGAAACCCACTTCTGAATCTGCTACAACGACAGAAACTTTTGAAGATGCAAGTCGCAGTCATCCCTACGGCAAGGAAGAGTTTAACTACAGTGGAATCTTTCCATCAGCAAAGTTAGAGCCTCAGTGA 2889 0.406 MDRERKLLLLILLFQVLLVAAQTTSTDDSKGVAGLTENWDQEPPSWVGSDPCGSNWEGIRCNNSRIISIKLSSMKLSGTLSSEIQSISELEILDLSFNKGLTGRIPDEIGNLINLNTLILVGCSFFGIIPASIGNLQQLTFLALNSNQFSGEIPRTIGNLSNIEWLDLSDNQFQGGIPVSDDNGPGLDLLHTAQHFHFGNNRLSGPVPTKLFSSNMTLIHVLFDNNGLNGSIPSSLGLVKTLEVVRFDRNQLIGQVPVNFSSLESLTELYLSNNKLNGSLPDLSGLSLTYVDLSNNSFNASEIPTWASTSQFITTLNLGNTGLQGDIPVSLFSLPNLESVVLRDNRLTGELDIGSFSNSRLQTIDVENNEISDFKQKNLQISATVLLLGNSICFETGAQEQSYCQERRSNLSYSTPPNHCSPPSLCISNQLSSPTCKCAHPYTGTLISRALSISNFGNSSYYVAIEQSLMSTMQSQNLPVDSVSLSNSFKNSSTDYFHVTLSFFPSQQDRFNRTGVSGIAFVLTNQIYKAPEFFNPYYFIGDDYQYYAGESSTKSTNAGVIAGAVVGVFVFLVIAVLAGIYAFRQKRRAQTAREMNPFVNWELNKDSGAAPQLKGARWFSFEELKKYTNNFSDANNIGSGGYGKVYRGVLTNGELVAIKRAGQGSLQGDVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIANGTLMDSLSGKSGIMLDWMKRLKVALGSARGLAYLHEHANPPIIHRDVKSSNILLDDHLNAKVSDFGLSKLIVDSERSHVTTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVLLLELITGRKPIEQGKYIVREVVRVMNRSKDLYNLQEILDPAIIKATTPNGLEKLVDLALNCVKEYAAERPSMAEVVKEIESIMELAGLKPTSESATTTETFEDASRSHPYGKEEFNYSGIFPSAKLEPQ 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01200 950 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
Bach12g01200 950 Gene3D Phosphorylase Kinase; domain 1 601 706 - -
Bach12g01200 950 SMART serkin_6 631 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01200 950 SUPERFAMILY Protein kinase-like (PK-like) 611 900 IPR011009 -
Bach12g01200 950 Gene3D Ribonuclease Inhibitor 285 384 IPR032675 -
Bach12g01200 950 SMART LRR_typ_2 334 358 IPR003591 -
Bach12g01200 950 SMART LRR_typ_2 263 286 IPR003591 -
Bach12g01200 950 SMART LRR_typ_2 136 160 IPR003591 -
Bach12g01200 950 ProSiteProfiles Protein kinase domain profile. 631 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01200 950 FunFam Leucine-rich repeat family protein 27 182 - -
Bach12g01200 950 Gene3D Ribonuclease Inhibitor 17 182 IPR032675 -
Bach12g01200 950 MobiDBLite consensus disorder prediction 28 47 - -
Bach12g01200 950 FunFam Leucine-rich repeat protein kinase family protein 599 706 - -
Bach12g01200 950 PANTHER RECEPTOR-LIKE PROTEIN 55 42 903 - -
Bach12g01200 950 Gene3D Ribonuclease Inhibitor 183 284 IPR032675 -
Bach12g01200 950 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 707 917 - -
Bach12g01200 950 Pfam Protein tyrosine and serine/threonine kinase 635 899 IPR001245 GO:0004672|GO:0006468
Bach12g01200 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Bach12g01200 950 CDD STKc_IRAK 637 903 - -
Bach12g01200 950 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Bach12g01200 950 Gene3D Transferase(Phosphotransferase) domain 1 707 924 - -
Bach12g01200 950 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Bach12g01200 950 ProSiteProfiles Leucine-rich repeat profile. 265 287 IPR001611 GO:0005515
Bach12g01200 950 MobiDBLite consensus disorder prediction 914 934 - -
Bach12g01200 950 SUPERFAMILY L domain-like 40 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01200 Bach-Chr12 8348414 8354411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01200 7 950 Receptor kinase-like Gene Family AT5G49760 54.679 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bach12g01200 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01200 - - gmx:100786172 1160.21