LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach12g01198	ATGGATCGAGAAAGGAACTTGTTTCTGCTAATACTTGTATTTCAAGTTCTGCTTGTAGCAGCACAGACCTCCAGTACTGATGACTTTAAAGGTCTAGCAGGTCTCACCGAAAACTTGAAGAAAAAACCTTCAAGTTGGGTGGGTTCGGATCCTTGTGGCAGTAACTGGGAAGGAATTCAGTGCAACAACAATTCAAGAGTTATCTCAATAGCTCTGAATTTAAATCAGTTTACTGGACAGATTCCACGTACAATTGGTAATCTAGCCTACATTACATGGCTAGACCTTTCTGATAACCAACTCCAAGGAGTTATCCCTGTCTCAGATGATAAGGGACCTGGTCTTGATTTGCTACATAATGCAAAACACTTTCATTTTGGAAACAATAGACTCTCGGGTCCAGTTCCGACTAAACTTTTCAGCTCAAACATGACACTAGTCCATGTGATTTTTGACAACAATAAATTGAATGGCAGCATTCCTAGTTCCCTTGGACTTGTCAAAACTCTGGAAGTGGCGCGTTTCGATAGAAATGAATTGATTGGGCAAGTGCCTAACATCAGTACTCTGAAAAACCTTACTAAGCTGTATTTGTCCAACAATAAGCTGAATGGCTCTCTGCCTGATCTTAGTGGACTACCTCTCACCTTGGTGGATTTGAGCAAGAATAGTTTCGATGCTTCTGAGATTCCTCATTGGGCTTCAACTTTGCAGTTGGTGATAACATTAAATTTAGGAAACACCAGGCTCCAAGGCAGCATACCGGCCCCATTATTTTCCCTGCCCAATTTAGAGTCTGTGGTTTTGAGGGGCAACCGGCTCACTGGCGACATAGATATTCGCAGTTTCAACAACAGCCGTCTGCAAACAATTGATGTGAGAAATAATGAAATAAGTGATTTCAAGCATGGAAACTTGCAGAGTCCTGCAGTATTCCTATTTGGCAACCCACTTTGTGCTGAAACCGGAGTGCGTGAACAAGGTTACTGCCAAGATAGCCAACCCAATTCATCGTATTCAGTGCCACAAAATCATTGTTCTGTTCTTTGCATTTCCAGTCAGCTTTCCAGCCCGAACTGTAAATGTGCACATCCATATACTGGAACTCTTATTTCCAGAGCTCCTAGTATCTCGAACTTTGACGATTCAAGTTACTATGTGGATATTGAGCAGTCTCTGATGAGAACTTTCCAATCCCAAAATCTTCCAGTGGATTCAGTTTCCCTGAGTAATCCCTTCAAGAATTCTTCCACTGATTATTTTCAACTGACTGTGAGTTTCTTCCCTTCTCAACAAGATCGTTTCAATAGAACTGGAGTCTCTGGTATAGCTTTTGTGCTTGTCAACCAGATTTATAAAGCCCCAGAATTTTTTAGCCCTTCCTACTTTACTGGTGATGGCTATCAATACTATGCAGGAGAACCTTCAACAAAGTCAACAAATGTAGGGGTTATAGCTGGTGCAGTAGTTGGTGTATTTGTCTTTTTGGTGATAGCAGTTCTTGCTGGTATATACGCCTTCCGCCAAAAGAGAAGAGCACAGACAGCAAGAGAGATGAACCCTTTTGTAAACTGGGAACTGAACAAGGATGGTGGTGCTGCTCCTCAGTTGAAAGGAGCAAGATGGTTCTCTTTTGAAGAGCTAAAGAAATACACCAACAATTTCTCCGATGCGAATAATATTGGATCTGGGGGCTATGGAAAGGTTTACCGAGGAGTACTTACCAATGGGGAATTGGTTGCTATCAAACGGGCTGGAGAAGGATCTTTGCAAGGTGCTGTCGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTACATCATAAGAACCTCGTCAGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAGCAAATGCTGGTGTATGAGTATATTGCCAATGGAACATTAATGGATAGTCTTTCAGGAAAATCTGGGATCACGTTAGATTGGATGAAAAGACTAAAAGTAGCCCTCGGTTCAGCCAGGGGTCTAGCCTATCTTCATGAACACGCTAACCCACCAATAATACACAGAGATGTAAAATCAAGCAATATACTACTTGATAATTACCTAAATGCCAAAGTTTCTGATTTTGGTCTCTCCAAACTTGTTGACAGTGAAAGGGGGCATGTCATTACTCAAGTCAAAGGAACAATGGGGTACTTGGATCCTGAATACTACATGACACAACTTTTGACTGAAAAGAGTGATGTTTACAGCTTTGGAGTATTATTGTTGGAATTAATAACAGGAAGAAGGCCAATACAACAAGGAAAATACATTGTGAGAGAGGTAGTAAGGGTAATGGATAAATCAAGAGATTTATACAACCTTCGTGAAATTCTAGACCCTACTATAATCAAAGTAACAACCCTAAAAGGCTTAGAAAAGCTCGTGGATCTGGCATTGAACTGTGTTAAAGAATATGCAGCTAGGAGACCTTCAATGGCCGAGGTGGTAAAGGAGATTGAAAGCATAATGGAGCTTGCTGGTCTGAACCCCACGTCTGAATCTGCTACAATGTCAGAAACTTTTGAGGATGTAAGTGTCCGCCATCCTTATGGCAATGAAGATTTTTACAACAGTGGAATCTTTACATCAGAAGAGGTAGAACATCACTGA	2622	0.4123	MDRERNLFLLILVFQVLLVAAQTSSTDDFKGLAGLTENLKKKPSSWVGSDPCGSNWEGIQCNNNSRVISIALNLNQFTGQIPRTIGNLAYITWLDLSDNQLQGVIPVSDDKGPGLDLLHNAKHFHFGNNRLSGPVPTKLFSSNMTLVHVIFDNNKLNGSIPSSLGLVKTLEVARFDRNELIGQVPNISTLKNLTKLYLSNNKLNGSLPDLSGLPLTLVDLSKNSFDASEIPHWASTLQLVITLNLGNTRLQGSIPAPLFSLPNLESVVLRGNRLTGDIDIRSFNNSRLQTIDVRNNEISDFKHGNLQSPAVFLFGNPLCAETGVREQGYCQDSQPNSSYSVPQNHCSVLCISSQLSSPNCKCAHPYTGTLISRAPSISNFDDSSYYVDIEQSLMRTFQSQNLPVDSVSLSNPFKNSSTDYFQLTVSFFPSQQDRFNRTGVSGIAFVLVNQIYKAPEFFSPSYFTGDGYQYYAGEPSTKSTNVGVIAGAVVGVFVFLVIAVLAGIYAFRQKRRAQTAREMNPFVNWELNKDGGAAPQLKGARWFSFEELKKYTNNFSDANNIGSGGYGKVYRGVLTNGELVAIKRAGEGSLQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIANGTLMDSLSGKSGITLDWMKRLKVALGSARGLAYLHEHANPPIIHRDVKSSNILLDNYLNAKVSDFGLSKLVDSERGHVITQVKGTMGYLDPEYYMTQLLTEKSDVYSFGVLLLELITGRRPIQQGKYIVREVVRVMDKSRDLYNLREILDPTIIKVTTLKGLEKLVDLALNCVKEYAARRPSMAEVVKEIESIMELAGLNPTSESATMSETFEDVSVRHPYGNEDFYNSGIFTSEEVEHH	873

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach12g01198	873	Gene3D	Ribonuclease Inhibitor	213	347	IPR032675	-
	Bach12g01198	873	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	631	839	-	-
	Bach12g01198	873	SMART	serkin_6	555	827	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach12g01198	873	Gene3D	Transferase(Phosphotransferase) domain 1	631	846	-	-
	Bach12g01198	873	Pfam	Protein kinase domain	557	821	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach12g01198	873	FunFam	Leucine-rich repeat protein kinase family protein	111	209	-	-
	Bach12g01198	873	SUPERFAMILY	Protein kinase-like (PK-like)	537	823	IPR011009	-
	Bach12g01198	873	Gene3D	Phosphorylase Kinase; domain 1	526	630	-	-
	Bach12g01198	873	PANTHER	RECEPTOR-LIKE PROTEIN 55	38	826	-	-
	Bach12g01198	873	ProSitePatterns	Protein kinases ATP-binding region signature.	561	583	IPR017441	GO:0005524
	Bach12g01198	873	FunFam	Leucine-rich repeat protein kinase family protein	524	630	-	-
	Bach12g01198	873	CDD	STKc_IRAK	561	826	-	-
	Bach12g01198	873	ProSiteProfiles	Leucine-rich repeat profile.	192	214	IPR001611	GO:0005515
	Bach12g01198	873	SUPERFAMILY	L domain-like	33	304	-	-
	Bach12g01198	873	ProSiteProfiles	Protein kinase domain profile.	555	827	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach12g01198	873	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	675	687	IPR008271	GO:0004672\|GO:0006468
	Bach12g01198	873	Gene3D	Ribonuclease Inhibitor	30	142	IPR032675	-
	Bach12g01198	873	Gene3D	Ribonuclease Inhibitor	143	212	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach12g01198	Bach-Chr12	8329821	8335625	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach12g01198	6	871	Receptor kinase-like Gene Family	AT5G49760	49.156	0.0	812

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Bach12g01198		Pkinase	2.3e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach12g01198	-		-	gmx:100786172	983.786