Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01188 ATGGGGGGTTTGATCGATCTTAATACTACAGAGGACGATGAAACGCCATCATCTGGTTCCTCTGCCTCTTCATCTAACTCTGGTTTAAGTACTGCTGTTTCGGCCTCTGCTTTGGCTGCTACTGCTGCTGCTTCTTCCGTGTGCTTGGAGCTATGGCACGCGTGTGCGGGCCCAATGATCTCGTTGCCGAAGAAAGGGAGTGTGGTGGTGTATTTCCCACAAGGACACTTTGAGCAGGTTCAGGGTTTTCCGGTCACAGCCCATAATATCCCAACCCATGTGTACTGTCGCGTTGTTGATGTCAAGCTCCATGCTGAGGAGGGGAGTGATGAAGTATATTGCCAGGTCTCCTTGGTTCCTGAAACTGAGCACGTTGAACAAAAATTGCTAGAAGGGACAATTGATGCAGACGGTGAAGAGGAGGATGCGGAAGACATGGTGAAGTCAACCACACCACACATGTTCTGCAAGACTCTGACTGCTTCTGATACCAGTACTCATGGTGGATTCTCTGTCCCTCGTCGAGCAGCTGAAGATTGCTTCCCTCCCCTGGACTACAATCAGCAGAGACCTTCTCAAGAGCTTGTAGCAAAGGATCTGCATGGACTTGAATGGAAGTTCCGACATATCTACAGAGGGCAGCCACGGAGGCATTTGCTCACAACAGGATGGAGTGCATTTGTAAACAAGAAGAAGCTGGTGTCTGGAGATGCTGTGCTCTTCCTTAGGGGAGAGGATGGGGAACTGAGATTGGGAATTCGAAGGGCACCTCAGTTGAAAGGTGGTGCCACCTTTTCAACTCCTACTGGCCAGCAATTGAATCCCAGTACACTTATGGATGTGGTTAATGCTCTTACCGTGAGATGTGCTTTTAGTGTTTGCTATAACCCAAGGGCCAGTTCATCAGCCTTCATAATACCTCTCCACAAATTCTTGAAGAACCTAGATCATTCCTATTCAGTTGGAATGAGGTTCAGGTTGCGTTTTGAATCTGAAGATCCTGGAGAGGGAAGGTGCACTGGGTTAGTTGTTGGAATTAGTGATGTGGATCCTGTTAAATGGCCTGGATCAAAATGGAGATGCATACTGGTCAGATGGGATGACATGGAAGCCACTAGGCATAATAGAGTGTCTCCTTGGGAAATTGAGCCAACTGGTTCTGCTTCCCCTTCTAATAATTTGATGGCAACTGGTTTGAAAAGGACCAGGATTGGATTGCCATCAGCAAAGCTAGAATTTCCAGTTCCCAATGGAATTGGAACATCAGACTTTGGGGAATCATTGAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTGAGTGTTAATACTCCCTATGATGTTATTAATGCTCAGAGTCACCAATTCTCTGAAATGAGGAGGTGCTATCCTGGTTCAAATTGTTCTGGGATTGTTGCGCCAGTAAATAGCATCAGATTCCCTGAAATGAATTCTGACAATGGCATAGGCATCGGTGAATTCCAGTTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAGAGTTTTGTCTGTTGACGAGGCTCAAGGAAATGGTTGCTATGGAAATTTTGATGGTTTTCAGTTGATGGGCTCCGGAAATAGATGGTCTGCCAAGATACAGGATAGTTCTACTCATTTGCATCCTCCTCCTCCATCTGGGCAAGTGTCATCTCCATCATCTGTGTTGATGTTCCAGCAAGCTGTCAGTCCAGCTTCAAACTGTGATTCCATATATAATACCATCTGTGGTAGTCGGAATATTGAAGGTAAAGCCCATTTTCGTGGTTCATACACTTCTGAAGTGAACGGTGGCAAAATCACTTCTTCCCCTTGTTATGGGTCTATCATTGGTGGGAAAGCTAAGGAAGGAGTAAGTTCATTTGGCATGTTAAATTTGCATAAGCCTGTTGATGCTTCACCGTCTAATGACTCTATGTCTCCATTGAGAGGCAATCAAGAGTTGGCTTCTTCGTGTAAAAGTAGCTGCAGACTCTTTGGCTTTTCATTAACTGAGGAAAGTCATGTTGCAAAGAAAGATGCTGACCCTATTACCGTCACTCATCAATTGAATTCTGGAACTTCCTTTACAAGACATGTTGGAGATAAGTTCCATCCAGAGTCTTCCCTGAGGAGTAAGGCAGGTGGAAGCAACTATGTCAAAGGTGTGCTGCAGTGTTGATATGAGCATGATGTACACTGAATGGTTTGCTGAATCTGAAGTAGCAGACCAGAAAGCTGTGTGTACTGTAATAACTTCAGAATTTCAAGGAAGAAATTGTAATTCAGAGTTAACCTAAATTTATCTAAAGATTTTCTATGACCACACTGAAGGGGTTGTATTTGAATGTTTCGAGTTCCTACTCGTAGACCTGCGAGTGGCATCAAATTTGCTATGCCAATGTATCTGTGTGTATGCACCTTTCTGCCAACATTGAAAATGAGCGTTGTTTGGCTGAGATTTCGAACAAAATTATGTCTAGTTATATTATTTGACGAAGGTTTTGT 2522 0.4441 MGGLIDLNTTEDDETPSSGSSASSSNSGLSTAVSASALAATAAASSVCLELWHACAGPMISLPKKGSVVVYFPQGHFEQVQGFPVTAHNIPTHVYCRVVDVKLHAEEGSDEVYCQVSLVPETEHVEQKLLEGTIDADGEEEDAEDMVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAPQLKGGATFSTPTGQQLNPSTLMDVVNALTVRCAFSVCYNPRASSSAFIIPLHKFLKNLDHSYSVGMRFRLRFESEDPGEGRCTGLVVGISDVDPVKWPGSKWRCILVRWDDMEATRHNRVSPWEIEPTGSASPSNNLMATGLKRTRIGLPSAKLEFPVPNGIGTSDFGESLRFRKVLQGQEILSVNTPYDVINAQSHQFSEMRRCYPGSNCSGIVAPVNSIRFPEMNSDNGIGIGEFQFQKVLQGQEILPSQPYGRVLSVDEAQGNGCYGNFDGFQLMGSGNRWSAKIQDSSTHLHPPPPSGQVSSPSSVLMFQQAVSPASNCDSIYNTICGSRNIEGKAHFRGSYTSEVNGGKITSSPCYGSIIGGKAKEGVSSFGMLNLHKPVDASPSNDSMSPLRGNQELASSCKSSCRLFGFSLTEESHVAKKDADPITVTHQLNSGTSFTRHVGDKFHPESSLRSKAGGSNYVKGVLQC 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01188 731 Gene3D - 318 392 - -
Bach12g01188 731 Gene3D - 153 256 IPR015300 -
Bach12g01188 731 MobiDBLite consensus disorder prediction 10 27 - -
Bach12g01188 731 SUPERFAMILY DNA-binding pseudobarrel domain 148 265 IPR015300 -
Bach12g01188 731 MobiDBLite consensus disorder prediction 1 27 - -
Bach12g01188 731 FunFam Auxin response factor 318 389 - -
Bach12g01188 731 ProSiteProfiles B3 DNA-binding domain profile. 155 257 IPR003340 GO:0003677
Bach12g01188 731 MobiDBLite consensus disorder prediction 543 564 - -
Bach12g01188 731 Pfam B3 DNA binding domain 155 256 IPR003340 GO:0003677
Bach12g01188 731 CDD B3_DNA 153 255 IPR003340 GO:0003677
Bach12g01188 731 Pfam Auxin response factor 282 362 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach12g01188 731 SMART B3_2 155 257 IPR003340 GO:0003677
Bach12g01188 731 FunFam Auxin response factor 153 257 - -
Bach12g01188 731 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 46 683 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01188 Bach-Chr12 8268159 8274261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01188 154 508 B3 DNA Binding Superfamily AT2G33860 59.053 2.56e-141 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach12g01188 B3 2.2e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01188 K14486 - gmx:100789906 1023.46