Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01179 ATGGAGACCGAGGTTACTTCCGAAGGGGAGAATCAGCAGAGGGATGCTGCAGAAAATAACAATGAGAACAATGGAAGTAGCAGCAAAATTGGTAATTCCAACGAGGGGCAGAGCAAGCCCAAACGCCAGATGAAGACCCCCTTTCAGCTTGAATCCCTGGAGAAAGCCTATGCATTGGAGATGTACCCGTCGGAGGCGATGCGAGCGGAACTGTCAGAGAAGTTGGGGTTGTCGGATCGGCAATTGCAGATGTGGTTTTGCCATAGGAGATTGAAGGACAAGAAGGAGTTGCCGCCCAAGAAACCTCGGAAAACAGTGGCGGCTATGCCGGATTCTCCGCCGATTGATGAGCTCAGGTTGGGGGCACCAGAGGTTGGTAACGACTATGGATCCGGGTCGGGTTCAGGCTCAAGCCCGTTCACTCGTCCGGATTTGAGGAATGTAGTACCTCGGGGTGTGTCTGGGTATTATGAGTCCCCACAGTCTATACTGGAACTTAGAGCAATTGCTTGTGTGGAGGCTCAGTTAGGGGAGCCATTGAGGGAAGATGGACCCACTCTAGGAATAGAGTTTGATCCATTGCCACCAGATGCATTTGGGCAACCTATAGCAGTTGCTGAGCAGCACAAGCGGCCCAATCTTGCGTATGATGGTAAAATGTACGAGAGACATGATGTTAGATCAAACAAGGCCTTGACAAGAGCTTTTCATGAGTATCCATTTCTTCCTACTCAGTCTGGTATTAGATCAGATGCTTATGGACAGTTGACCCAAGCTCATTTACATGATCCAATAATGGATGGTCCTGCCAGAACTCCATCTTTTGGGCTTGGAAGTGGACAGATACCCCGGATTCATGCTGCCCAGGGTCATTCATCACGTGTTCGTCTCATGGCCCAACAAGACAAGCAAGGGATTCCCTATCCATCACCTCCCCGGGATGATGATGGTGGCTCCCAAAGGGACTCTTTCACAAACGTAGGCAACATTGGAGGGAACTCTCACTACACTGATCACCCAAATGTTGGAACAGAGAATCCTTATACTCTGTCCACTGGACAAGTTTTTCATAGTGACACAATGTTGCGAATGGAGAGGAAACGAAAGAGTGATGATAGTAGAATGGCAAGGGAAGTTGAAGCTCATGAAATGAGGATTCGAAAAGAACTTGAGAAACAAGATAACCTTAGGCGGAAGAGTGAAGAGCGAATGAGGAAGGAAATGGAGAGACAAGATCGTGAAAGAAGAAAGGAAGAGGAGAGGTTGATTCGTGAGAGACAGAGAGAAGAGGAAAAAACAAAACGCGAGCAAAAACGTGAGCTTGAACGAAGGGAAAAATATTTGCAGAAAGAACATTTAAGAGCTGAGAAAAGGAGGCAAAAGGAAGAACTTCGGAAAGAGAAAGAGGAAGAGCGAAGGAAAGCTGCCCTTGAGAAGGCAGTTGCTCGTAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGGTTTCCTCCATTATCCATCTTGATCTTGAAACTCTGCAAAACCTTGAATCACTTAGGGGTTCATTGATTGTTTTCCCACCCAAGAGTGTAAAGCTGAAAAAGCCATTTGCTGTCCAACCCTGGATAAACTCAGAGGAGAATGTTGGCAACCTTCTCATGGTTTGGAGATTTTTGATTACTTTTGCTGATGTTCTTGAGTTATGGCCATTCACTCTTGATGAGTTTGTTCAAGCATTTCATGACTATGATTCAAGATTGTTGGGTGAAATACATGTTGCTCTTCTTAAAGTGATGATAAAAGATATTGAACATGTTGCAAGGACGCCTTCTACAGGGTTAGGAATGAACCAGAATGGTGCAGCTAATCCTGCAGGTGGCCATCCAGAGATTGTTGAGGGGGCATATGCATGGGGCTTTGACATACGAAGTTGGCAGAAGCACTTAAATCAATTGACGTGGCCAGAAATCTTTCGACAGTTAGCGTTGTCTGCCGGGTTTGGACCACAGCTAAAGAAAAGAAGTATCACATGGTCATATGTGAATGACAAAGATGAGAGTAGAAGTTGTGAAGATATCATTTCTACACTTCGGAATGGATCAGCAGCTGAAAACGCGGTGGCAAAAATGCAAGAGAAAGGTCTGCTAGCCCCTCGAAGATCTAGGCACCGGTTGACTCCTGGAACAGTCAAATTTGCAGCATTTCATGTTCTGTCCCTTGAGGGGAGCAAGGGATTGACAGTGCTAGAACTTGCCGAAAAAATACAGAAATCTGGACTTAGGGACCTAACAACAAGCAAGACACCTGAGGCATCAATTTCTGTTGCTTTGACAAGGGATGCTAAGCTTTTTGAAAGAATAGCTCCATCAACATATCGTGTGCGATCTGCATATAGAAAGGATCCTGCTGATGCTGAGGCCATCCTTTCAGCAGCTAGAAAGAAAATTCAGGTATTTGAAAATGGATTTTTAGCTGGTGAAGATGGTGACGGTGATGGGGATGGGGATGATGTTGAGAGAGAGGAAGATTCTGAAAGTGATGAAGTGGATGATGATCCAGAAGTTGACCCGGAAGTTGGTGATCTAATTAGTCCTTCAACTGCAGACAAAACCTCTGAACAGTATGATGACACAAACATCTGCACAACAAATGGGAAAGAAAATTTGGTCCAAGATGTAGAACTAATTCAAAGTGAGTTTGATAAGGACCTGCCTTGTTTTCCTGAGAATGGTTCTAAGGATACTGATTGTCCAAGTGCCGTTACTGGTCAAGTTGTTGCTGGTGAAGATCTGAATTCTGTTAACCTTGATGAAGATAATATGGAAATTGATGAAAGCAAATCGGGGGAGTCATGGGTTCAAGGCCTTACAGAAGGAGAATATTCTGATCTCAGTGTAGAAGAGCGTCTAAATGCTCTTGCTGCATTGGTTGGTGTGGCAAATGAAGGAAACTCAGTCCGCATTGTACTAGAGGATCGCTTGGAAGCCGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAATTCGGCTGAAAGACGATAATGCAAATAAGTCAGATTTTATTGGGAATAAAGTTGAACCACAATACACATGTCCTCCTCTGGAGGGAAACCAAAGCCCATTGATTGACATTAATATTAGTAATAATGATGAGGCATCACCTGGCACTGCTGAAAATCTAAAAGCAGTTCCTGGTTCACAGAGCTTGCCTGCTGAGAAGGCCTCAGTGGTTCAAGATCTCTTCACAGGTCCAGATAACCCTCAAACTCAGCAACCTGCACATGCTTCGAAGAGGTCTCGTTCACAGTTGAAATCTTATATTGCCCACATAGCTGAAGAGATGTATGTGTACAGGTCCTTGCCCCTAGGACAAGATCGGAGACATAACCGATATTGGCAGTTCGTAGCATCTGCTTCAAGTAATGATCCTGGTTCTGGCAGGATCTTTGTGGAATTACATGATGGCAATTGGAGACTTATTGATTCTGAAGAGGCCTTTGATACCCTTTTGAAGTCACTGGATTCACGAGGGATCAGGGAATCTCATTTGCGGTTAATGTTGCAAAAGATTGAGAGTTCCTTTAAAGAAAATGTTCGTAAGAATGCACAATGTGATAAACTGGGAACCAAAGGTAAAGTTTCTGTTAAAAATGAAGCTGAAGAAACAGATTCCAGCCCTGATCCCCATGTTGGATTTGACAGTCCTAGCAGTACTCTTTGTGGTTTAAATCCTGATACATTGGAAACTTCGTCATCCTTCAAAATTGAGCTTGGGAAAAGTGAGAGTGAGAAAAAAGCTGGCTTGAGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAACTTTTCAACGTTATGTGCAATGAAATATGGGAGAAAGAGATGCAAAATGCTGGTGGACATCTGTGATATCTGCCTCAACTCATATTTCCTTGAAGATTCCCATTGTAATTCTTGCCACCGAACATTTCCCTCAAATAATGGATTTAATTTTTCTAAGCATGCATTTCAATGTGGAGAGAAGTCAGACTCCAAAGATATTTGTATTTTTGATTCTTCACTTCCCTTGAGAACAAGATTGCTCAAGGCCCTGCTGGCTTTTATTGAGGTATCTGTTCCACCTGAAGCATTTCAGCCAACTTGGACAGATGAGAATAGGAAGCGCTGGGGTGTGAAGTTGGGCACATCATCTTCGGTTGAGGAACTTTTACAGAGGTTAACCTTGTTTGAGGAAGCATTACAGCGAGACTTTCTGTCATCAAACTTCTCTACAACAGAGGAATTGTTGGGATCGAGTAGTTTAGCAGATGGTGCTGCACATGCTTCTACTGATCCTGAATCAGTTCCTGTAATTCCATGGGTTCCACAAACCACTGCCGCAGTATCTCTTAGACTTTTCGATTTTGATGCTTCCATCAGTTATGCAAAGCTTGAGAAACCTGAACCTCGTGAAGAGAAAGAAGTCGGAGAATATATGAAACTTCCCTCAAGATTCACCCCCTTCAAATCTCATAGGGAGGATGAACCAGCAGAATTAGGCCATGACGAATTCATTAAAGATAAATCTGCCGACAGAAAAGTTGTACGAGGTAGCAGCAATAAACGAAGAAGAGGGTCTCAAGATCAAGGACGGGGTAAAAAGTCTAGAAGAATATGCGAAACCAAACAAAACAATACTGGCAGGCGTAATGCTAAGGTTAATGGAAACCTAAGTCAAGGACTGAAACAGCAAGGACGAGGAACACAAGGACAAGCTGGCGCACGTGGTCGAAGAACTGTCAGGAAACGGAGAGTGGAAAAGAGGGTTGTTGAGAATTTGTTGTTGGGTCACACAACTGCCACTCCGAGCTCCAAGATGAGTAGGGAATCATCACTGAGAAGTTTGGAAGAGGAATGGGAAGGTGAAAGAGAAAGTAACATGCACATAGAGGGTGCTGATAATAGTAACAGTGCTGAAGAAGTGGAATCTGATGACAATGGCCAAGCAGTGGAATATGATCGAGGAAATTGGGAGGTAGGTTTCAATGGTACATCCAACAGATGGAGTAGGGAATTAGTTGGTGTGAGTGATGAAGACGTGGACGCTTCAGAGGATGACAATGTCATGGAAGAGGTAGAAGATGAGGATTCAGAGGCAGATGTTGTGAGCGAGGGTTCAGATGGTATAGCAAATAGAGGTGTTGTGAACGAAGAAGGCTCAGACTCTGCTGTTTCTGAAGACTCCTCTGATTAG 5280 0.4402 METEVTSEGENQQRDAAENNNENNGSSSKIGNSNEGQSKPKRQMKTPFQLESLEKAYALEMYPSEAMRAELSEKLGLSDRQLQMWFCHRRLKDKKELPPKKPRKTVAAMPDSPPIDELRLGAPEVGNDYGSGSGSGSSPFTRPDLRNVVPRGVSGYYESPQSILELRAIACVEAQLGEPLREDGPTLGIEFDPLPPDAFGQPIAVAEQHKRPNLAYDGKMYERHDVRSNKALTRAFHEYPFLPTQSGIRSDAYGQLTQAHLHDPIMDGPARTPSFGLGSGQIPRIHAAQGHSSRVRLMAQQDKQGIPYPSPPRDDDGGSQRDSFTNVGNIGGNSHYTDHPNVGTENPYTLSTGQVFHSDTMLRMERKRKSDDSRMAREVEAHEMRIRKELEKQDNLRRKSEERMRKEMERQDRERRKEEERLIRERQREEEKTKREQKRELERREKYLQKEHLRAEKRRQKEELRKEKEEERRKAALEKAVARRIAKESMELIEDEQLELMELAAASKGVSSIIHLDLETLQNLESLRGSLIVFPPKSVKLKKPFAVQPWINSEENVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVALLKVMIKDIEHVARTPSTGLGMNQNGAANPAGGHPEIVEGAYAWGFDIRSWQKHLNQLTWPEIFRQLALSAGFGPQLKKRSITWSYVNDKDESRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRSAYRKDPADAEAILSAARKKIQVFENGFLAGEDGDGDGDGDDVEREEDSESDEVDDDPEVDPEVGDLISPSTADKTSEQYDDTNICTTNGKENLVQDVELIQSEFDKDLPCFPENGSKDTDCPSAVTGQVVAGEDLNSVNLDEDNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALAALVGVANEGNSVRIVLEDRLEAANALKKQMWAEAQIDKIRLKDDNANKSDFIGNKVEPQYTCPPLEGNQSPLIDINISNNDEASPGTAENLKAVPGSQSLPAEKASVVQDLFTGPDNPQTQQPAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRHNRYWQFVASASSNDPGSGRIFVELHDGNWRLIDSEEAFDTLLKSLDSRGIRESHLRLMLQKIESSFKENVRKNAQCDKLGTKGKVSVKNEAEETDSSPDPHVGFDSPSSTLCGLNPDTLETSSSFKIELGKSESEKKAGLRRYQDFQKWMWKECYNFSTLCAMKYGRKRCKMLVDICDICLNSYFLEDSHCNSCHRTFPSNNGFNFSKHAFQCGEKSDSKDICIFDSSLPLRTRLLKALLAFIEVSVPPEAFQPTWTDENRKRWGVKLGTSSSVEELLQRLTLFEEALQRDFLSSNFSTTEELLGSSSLADGAAHASTDPESVPVIPWVPQTTAAVSLRLFDFDASISYAKLEKPEPREEKEVGEYMKLPSRFTPFKSHREDEPAELGHDEFIKDKSADRKVVRGSSNKRRRGSQDQGRGKKSRRICETKQNNTGRRNAKVNGNLSQGLKQQGRGTQGQAGARGRRTVRKRRVEKRVVENLLLGHTTATPSSKMSRESSLRSLEEEWEGERESNMHIEGADNSNSAEEVESDDNGQAVEYDRGNWEVGFNGTSNRWSRELVGVSDEDVDASEDDNVMEEVEDEDSEADVVSEGSDGIANRGVVNEEGSDSAVSEDSSD 1759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01179 1759 SMART testlast3 554 613 IPR018501 -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1573 1599 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 360 419 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1707 1731 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1 49 - -
Bach12g01179 1759 Pfam HB1, ASXL, restriction endonuclease HTH domain 736 804 IPR007759 GO:0006355
Bach12g01179 1759 MobiDBLite consensus disorder prediction 321 358 - -
Bach12g01179 1759 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 956 999 IPR028942 -
Bach12g01179 1759 Coils Coil 379 481 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1226 1249 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1226 1240 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 835 866 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 303 419 - -
Bach12g01179 1759 ProSiteProfiles HARE-type HTH domain profile. 736 805 IPR007759 GO:0006355
Bach12g01179 1759 ProSiteProfiles DDT domain profile. 554 613 IPR018501 -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 10 45 - -
Bach12g01179 1759 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1131 1203 IPR028941 -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1093 1113 - -
Bach12g01179 1759 Gene3D - 22 97 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1515 1759 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1515 1572 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 831 887 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 873 887 - -
Bach12g01179 1759 Pfam Homeodomain 39 95 IPR001356 GO:0003677
Bach12g01179 1759 MobiDBLite consensus disorder prediction 452 471 - -
Bach12g01179 1759 SUPERFAMILY Homeodomain-like 27 95 IPR009057 -
Bach12g01179 1759 SMART HOX_1 38 100 IPR001356 GO:0003677
Bach12g01179 1759 CDD homeodomain 41 96 IPR001356 GO:0003677
Bach12g01179 1759 MobiDBLite consensus disorder prediction 93 145 - -
Bach12g01179 1759 Pfam DDT domain 555 610 IPR018501 -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1639 1658 - -
Bach12g01179 1759 MobiDBLite consensus disorder prediction 1094 1113 - -
Bach12g01179 1759 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 22 1759 IPR044977 GO:0006357
Bach12g01179 1759 ProSiteProfiles 'Homeobox' domain profile. 36 96 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01179 Bach-Chr12 8198209 8206668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01179 32 1695 Homeobox Transcription Factor Family AT1G28420 49.971 0.0 1363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bach12g01179 WSD 8.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01179 - - gmx:100777465 2279.6