Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01162 ATGGCTGTCTCCGACGTCGAAGCAGTACTAGAATTCTTGAGAAAAAATGGGCTCTCGGAAGCAGAGTCTGCTTTCAAAGAGGACATCATAGAAAAGCATGATCTGGGATCCTTTGACCATGAGAAGTTCTTCTTCCCAATGGTTCCACCGCCGCCACCGGTTAGAACCCGATCGAGTTCCCGGTTACCGGAGGCTCCCACCGGCAGAGAGTGCTCGAAATCGAGCTCCGAGTCCTCCGACGATGAATTTCAAAGCTTGAAGTCATCTACTTCAGCTTCAGAATTCATCAATCCATACGGAATACGTTCCTCATCTCAGACTCAGAATGATTCCGAATCTTCATCTGATAGATTATCTCAATTTGGCACTGCTCGTGATTACCATGATTTTGATATGCAAAACGAACCATACTGGTATAATGAGAAAGATGATGACCAGTTCATGACTCCTAGTTTTGAAGGGCCAGATTTCTTTGGCTGTCAAAGCAAGGATAAGTTTGTCATGACTTCAGAAATGGAAAATCAGCACGACAACTCTAAGGGTCTTAATTATGGCTATGAAGAGTTTCAACTAGAGGGAAATGAAGATTGCATGGACAATGCATACCTTTTCAATCATTCCTCAGTAGATGATGAAAATGAGACTTACTTGAAAGAATATAGTCATATGGACAAGAAAGACCAGCTTGAAGGAGGTTTAGAGGGAAAATCTGAGAAAAAAATTCTTGCCCATGGTTGTGAAGTCCCATTTTGCAAATGTTCTGCAGGTACACGAGATTCTTGCAGTGGGGATCCTGCAAACTACAGCTACCCCAGTTTGAAAGATATTCTGACTAATTTTCATTCAAAGGTTGTTGGTGATATTTCATCTTATGATTCTGCTCCAGAGAATAATAATGACTACACTAAGGGATCTAAAGGTTCCTATGACTTAACCATCAAATTTCCAGAAATGAACCTACCAAATGGACTTGATAACTATGGAGTTCGAGACACTGGAGATTCAACTGAAGAATGCCAAGAACCAGAGATTGCTACAGATGGAGAGGATGCTACTGATGACGAGCTCCTAAAGTATACTCAAGAGGATGAATATGAATTATTTGACCTAAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAGGCAAGGAGATACCCATTGTGCTTAATACAGTCCTAGCTGGCAGATACTATGTCACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTAGTTCAGGCACATGATCTTCACACTGGAATAGATGTTTGCTTGAAGATTATAAAAAATGACAAAGACTTCTTGGATCAAAGCTTGGATGAAATCAAACTTCTAAAACTTGTCAATAAGCATGACCCAGCTGATGAGCGCCATATATTGCGTCTTTATGACTACTTCTATCATCGGGAGCATCTATTCATTGTCACCGAGCTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAACCGAGAATCTGGTGGTGAAGCATACTTCACATTGAACAGGTTGCAGCTCATAACTCGTCAGTGTTTGGAGGCATTGCAATACTTGCATGACCTGGGAATCATTCACTGTGACCTGAAACCGGAAAATATTCTAATAAAAAATTACAAAAACTGTGAGATAAAGGTTATTGATCTTGGAAGCAGTTGCTTTCAGACAGACAGTTTGTGCCTATATGTACAATCACGATCATATAGGGCTCCTGAAGTGATGCTGGGGCTGCAATACGATGAAAAGATTGACATATGGTCTCTTGGGTGTATTTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGATGCAGTTGCGACGATTCTGGCACGCATGATTGGAATGCTTGGTCCTATTGATCTGGCGATGTTGGTGAAGGGGCAGGACACACACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGATACAAATCAGCTGGAGTACATAATGCCTGAGGAGATATCATTGGAGCAGCATCTGCAAGTTACTGATGCAGTGTTTATAGATTTTATCAGATACTTGCTTAGCATCAACCCAAAAAGACGGCCAAGCGCAAGACGGGCACTAAAGCATCCATGGCTCTCCCATGTTTATAAGTCCATGTAG 2127 0.4118 MAVSDVEAVLEFLRKNGLSEAESAFKEDIIEKHDLGSFDHEKFFFPMVPPPPPVRTRSSSRLPEAPTGRECSKSSSESSDDEFQSLKSSTSASEFINPYGIRSSSQTQNDSESSSDRLSQFGTARDYHDFDMQNEPYWYNEKDDDQFMTPSFEGPDFFGCQSKDKFVMTSEMENQHDNSKGLNYGYEEFQLEGNEDCMDNAYLFNHSSVDDENETYLKEYSHMDKKDQLEGGLEGKSEKKILAHGCEVPFCKCSAGTRDSCSGDPANYSYPSLKDILTNFHSKVVGDISSYDSAPENNNDYTKGSKGSYDLTIKFPEMNLPNGLDNYGVRDTGDSTEECQEPEIATDGEDATDDELLKYTQEDEYELFDLRIIHRKNRTGFEEGKEIPIVLNTVLAGRYYVTEYLGSAAFSKVVQAHDLHTGIDVCLKIIKNDKDFLDQSLDEIKLLKLVNKHDPADERHILRLYDYFYHREHLFIVTELLRANLYEFQKFNRESGGEAYFTLNRLQLITRQCLEALQYLHDLGIIHCDLKPENILIKNYKNCEIKVIDLGSSCFQTDSLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVATILARMIGMLGPIDLAMLVKGQDTHKYFTKEYDIYYVNEDTNQLEYIMPEEISLEQHLQVTDAVFIDFIRYLLSINPKRRPSARRALKHPWLSHVYKSM 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01162 708 FunFam Serine/threonine-protein kinase ppk15 478 702 - -
Bach12g01162 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Bach12g01162 708 FunFam Putative serine/threonine-protein kinase dyrk2 393 480 - -
Bach12g01162 708 CDD PKc_DYRK_like 399 701 - -
Bach12g01162 708 ProSiteProfiles Protein kinase domain profile. 399 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01162 708 Gene3D Transferase(Phosphotransferase) domain 1 453 701 - -
Bach12g01162 708 MobiDBLite consensus disorder prediction 60 119 - -
Bach12g01162 708 MobiDBLite consensus disorder prediction 46 119 - -
Bach12g01162 708 Gene3D Phosphorylase Kinase; domain 1 394 480 - -
Bach12g01162 708 Pfam Protein kinase domain 401 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01162 708 SMART serkin_6 399 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01162 708 PANTHER DUAL SPECIFICITY PROTEIN KINASE 106 702 - -
Bach12g01162 708 SUPERFAMILY Protein kinase-like (PK-like) 388 705 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01162 Bach-Chr12 8104432 8108152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01162 396 696 MAP Kinase Gene Family AT5G19010 30.818 1.71e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Bach12g01162 Pkinase 6.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01162 - - gmx:100783988 1065.06