Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01156 ATGATCAGCGTGAGCTCTAACAATGCCGGCGGCGATCGGGTCAAAGGATCCTGGAGTCCCCGCGAGGACGAGACTCTGATAAAACTGGTGGAGCAGCATGGCCCGCGCAATTGGTCCCTTATCAGCAGCGGCATCCCTGGCCGCTCCGGCAAGTCTTGCAGGCTCAGATGGTGTAATCAGCTCAGCCCCAACGTGCAGCATCGACCTTTTACACCCGTGGAGGACGATATCATCGTCCGGTATCATGCCGTCCACGGCAACAAGTGGGCCACCATCGCACGCCTCTTGCCTGGACGTACGGATAATTCTATTAAAAACCACTGGAATTCCACGCTTCGTCGCCGGGGAGCGGCGGCGACTGGTGAGTTGTCGTCGCCGCCATCTGCATCGTCGGAGTCCAACTCGATTTTAACTATGAAGCGGCGGAGGATCGGTGATCCCCTCGATGCCTCTGATGAGTCGGGATTCGGACAGTCATTGAAGCGGCCGTGTCTGCGGCGAGTTTCAGCAGAGAGTAATAGTTCCGATGATCAAAATGACGAGAAGAGGTTGGAGGGTCCGATGACATCACTGACATTATTGCCTCCGGGAGAGAGCATAACATTGGAGGAAGCGGCGGCGGAGGGTAACAAAGTGGATAAAGAGAATGAGAAAGAGGGGAAGGGGGTGAAGGAGGAGACTTGCTTGCTGAGGATGATACAACGCATGATAGCAGCGGAGGTTAGGAGTTACATTGATAACTTAGCCCCTCAGGATAGGCAAGCACTTAGAACTGGGTTGGGCCTAGACCTAGCTCTTCAAAAGTAA 807 0.5452 MISVSSNNAGGDRVKGSWSPREDETLIKLVEQHGPRNWSLISSGIPGRSGKSCRLRWCNQLSPNVQHRPFTPVEDDIIVRYHAVHGNKWATIARLLPGRTDNSIKNHWNSTLRRRGAAATGELSSPPSASSESNSILTMKRRRIGDPLDASDESGFGQSLKRPCLRRVSAESNSSDDQNDEKRLEGPMTSLTLLPPGESITLEEAAAEGNKVDKENEKEGKGVKEETCLLRMIQRMIAAEVRSYIDNLAPQDRQALRTGLGLDLALQK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01156 268 CDD SANT 69 112 IPR001005 -
Bach12g01156 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 65 IPR017930 -
Bach12g01156 268 MobiDBLite consensus disorder prediction 1 20 - -
Bach12g01156 268 MobiDBLite consensus disorder prediction 113 195 - -
Bach12g01156 268 FunFam MYB transcription factor 15 66 - -
Bach12g01156 268 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Bach12g01156 268 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bach12g01156 268 Pfam Myb-like DNA-binding domain 15 61 IPR001005 -
Bach12g01156 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bach12g01156 268 SMART sant 66 114 IPR001005 -
Bach12g01156 268 SMART sant 14 63 IPR001005 -
Bach12g01156 268 MobiDBLite consensus disorder prediction 123 138 - -
Bach12g01156 268 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bach12g01156 268 Gene3D - 14 66 - -
Bach12g01156 268 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach12g01156 268 PANTHER MYB PROTEIN-RELATED 15 167 - -
Bach12g01156 268 CDD SANT 17 59 IPR001005 -
Bach12g01156 268 Gene3D - 69 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01156 Bach-Chr12 8055712 8056518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01156 12 248 MYB Transcription Factor Family AT4G37260 42.164 5.83e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach12g01156 Myb_DNA-binding 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01156 - - qsa:O6P43_020183 278.87