Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01140 ATGGGTGGGAATTCCCCATGTGCTTCATGCAAGCTACTACGACGTCGTTGCGCCAAGGACTGCTTCTTCGCCCCTTATTTCCCTTCCGACGAACCCCAAAAATTTGCCATAGTTCACAAGGTTTTTGGTGCCAGCAACGTTAGCAAAATGTTGCAGGAACTCCCGGTTCACCAGAGAGCCGATGCAGTGAGCAGTTTGGTCTATGAAGCAAATGCCAGAGTCCGAGACCCAGTTTACGGCTGTGTTGGAGCCATAACTTACCTGCAAAACCAGGTTTCAGAGCTTCAAATGCAGCTTGCAGTGGCTCAAGCAGATATCCTCTGCATCCAGATGCAGCATGAGCAGGCAATGCCAAACCCAGAACTAACTGAAGTTGACCCAGATCAGAAATCTTACTTTCTCCAACATGACCTCCCTCAGTGCTTCAATTTTCCATCTTCTGGCAATGTAATCCATGACTCTCTCATGAGAGAGACCATTTTTGGACATGACATGGTTTCTTAA 504 0.4762 MGGNSPCASCKLLRRRCAKDCFFAPYFPSDEPQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAITYLQNQVSELQMQLAVAQADILCIQMQHEQAMPNPELTEVDPDQKSYFLQHDLPQCFNFPSSGNVIHDSLMRETIFGHDMVS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01140 167 Coils Coil 85 105 - -
Bach12g01140 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 119 - -
Bach12g01140 167 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Bach12g01140 167 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01140 Bach-Chr12 7945192 7945790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01140 3 134 AS2 family AT2G30130 79.699 4.12e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach12g01140 LOB 1.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01140 - - gmx:121173085 286.574