Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01137 ATGGATTCCGACTTCCCCAACAAAGCGTTAACGAGCACTCGCTTTTCAGAGCTGAACCCTCCAATCTCTGAACCGGTTCTTAAAGCCCTTTCAGAGTATGGGTTCGAGTTCTGCACACCAGTTCAAGCCGCCACAATACCTTTGCTATGCAGTTTCAAGGACGTTGCTGTCGACGCAGCCACTGGTTCGGGAAAGACCCTGGCTTTTGTTGTTCCACTCGTTGAGATTCTACGCCGGTCTTCTTCTCATCCTAAACCTCACCAGGTACTTGGAATAATTATATCTCCTACGAGGGAATTGTCTTCCCAAATATACCATGTTGCTCAACCTTTCATTTCGACATTATCGAATATGACATCCAGGCTTCTCGTTGGCGGAGTAGAAGTCAAAGCAGACATGAAGAAAATAGAGGAAGAGGGAGCAAATATATTGATTGGAACACCTGGGCGGCTATATGACATAATGGATCGGATGGATATCTTGGATTTTAAAAATCTGGAGATTTTGATTTTAGATGAGGCTGATAGACTTTTAGATATGGGATTCCAGAAGCAGATAACATCAATCATATCCCGCTTACCAAAGCTTCGCAGAACTGGTCTTTTCTCAGCTACTCAAACTGAGGCCGTTGAAGAGCTTTCTAAAGCAGGATTGAGGAACCCTGTGAGGGTTGAAGTTCAAGCAGAAGCAAAACCAACAAATGACGCTCTATCATCACAACAACTAGCCTCTTCAAAGACGCCTTCAGGACTTCACATTGAGTACATGGAATGTGAGGCAGACAAGAAACCATCTCAGCTTGTAGATATACTTATTAAGAATCGCTCAAGAAAAATTATAATATATTTCATGACTTGTGCTTGTGTTGACTATTGGGGAGTTGCCCTTAATCGTCTCTCCGTTTTGAAAGGTTTCTCTCTGATTCCCCTTCATGGAAAGATGAAGCAGACTGTCAGGGAGAAAGCACTTGCTTCATTCACATCTCTTTCAAGTGGAATTCTTTTATGTACTGATGTTGCTGCACGTGGACTTGACATACCAGGTGTTGATTGTATAGTGCAGTATGACCCCCCTCAAGATCCAAATGTTTTCATACATAGAGTTGGCCGAACTGCTCGGCTGGGTAAACAAGGACATGCTATTGTCTTCCTATTGCCAAAGGAGGAATCTTATGTAGAATTCCTGCGCATAAGAAGGGTCCCTCTTCAAGAGAGGAGATGCTTTGATGATGCATCTGATGTTGTTCCTCAGATTCGTGAAGCTGCCAAAAAAGATCGTGATGTCATGGAGAAAGGACTCAGGGCATTTGTTTCTTATGTCCGTGCATATAAAGAGCACCACTGCTCATATATTTTTAGGTGGAAAGAACTTGAAATTGGTAAGTTGGCTATGGGACATGGTTTATTGCAACTTCCTTCAATGCCAGAGGTAAAAAACCACTCGCTTTCTACTGAGGGTTTTGTACCAGTTGAAGATATCAATTTGGAGGACATTAAGTACAGGGATAAAAATCGTGAGAAACAAAGGAAGAAGAACCTGCAAGCAAAGAAAGAAGCCAAAGAAAAAGACCCACAACCTCAAAAGCGCATCAAAAACCCAACTGCAACTGTCACGAGGAAAAAAACAGCCAAACAGAGACGTGCTCAGCAGACAGTTGAAGATGAGGATGAATTAATGCGAGAATACCGCTTGTTGAAGAAATTGAAGAAAGGAACTATTGATGAAAGTGAATATGCAAAGTTAACAGGCACTGAGGAATTACTTTGA 1767 0.4228 MDSDFPNKALTSTRFSELNPPISEPVLKALSEYGFEFCTPVQAATIPLLCSFKDVAVDAATGSGKTLAFVVPLVEILRRSSSHPKPHQVLGIIISPTRELSSQIYHVAQPFISTLSNMTSRLLVGGVEVKADMKKIEEEGANILIGTPGRLYDIMDRMDILDFKNLEILILDEADRLLDMGFQKQITSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVQAEAKPTNDALSSQQLASSKTPSGLHIEYMECEADKKPSQLVDILIKNRSRKIIIYFMTCACVDYWGVALNRLSVLKGFSLIPLHGKMKQTVREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFIHRVGRTARLGKQGHAIVFLLPKEESYVEFLRIRRVPLQERRCFDDASDVVPQIREAAKKDRDVMEKGLRAFVSYVRAYKEHHCSYIFRWKELEIGKLAMGHGLLQLPSMPEVKNHSLSTEGFVPVEDINLEDIKYRDKNREKQRKKNLQAKKEAKEKDPQPQKRIKNPTATVTRKKTAKQRRAQQTVEDEDELMREYRLLKKLKKGTIDESEYAKLTGTEELL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01137 588 SMART DUF4217_3 413 476 IPR025313 -
Bach12g01137 588 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 46 224 IPR014001 -
Bach12g01137 588 SMART helicmild6 290 375 IPR001650 -
Bach12g01137 588 FunFam RNA helicase 9 227 - -
Bach12g01137 588 Coils Coil 503 523 - -
Bach12g01137 588 CDD DEADc_DDX55 26 224 - -
Bach12g01137 588 Gene3D - 253 485 IPR027417 -
Bach12g01137 588 Pfam Domain of unknown function (DUF4217) 416 474 IPR025313 -
Bach12g01137 588 MobiDBLite consensus disorder prediction 499 557 - -
Bach12g01137 588 Pfam Helicase conserved C-terminal domain 263 375 IPR001650 -
Bach12g01137 588 CDD SF2_C_DEAD 254 384 - -
Bach12g01137 588 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 15 43 IPR014014 GO:0003724
Bach12g01137 588 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 266 422 IPR001650 -
Bach12g01137 588 MobiDBLite consensus disorder prediction 499 528 - -
Bach12g01137 588 SMART ultradead3 34 240 IPR014001 -
Bach12g01137 588 Pfam DEAD/DEAH box helicase 39 213 IPR011545 GO:0003676|GO:0005524
Bach12g01137 588 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 170 178 IPR000629 -
Bach12g01137 588 PANTHER RNA HELICASE 12 520 - -
Bach12g01137 588 Gene3D - 3 227 IPR027417 -
Bach12g01137 588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 394 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01137 Bach-Chr12 7923346 7927487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01137 13 384 Eukaryotic Initiation Factors Gene Family AT3G19760 30.563 3.88e-46 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01137 K14809 - gmx:100801482 1021.54