Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01133 ATGTACAGAAAAAGAAGTTTACACCAATCAAAGCATCCGTTCGATTCTTACCCCTTTGAGGCTTGTCTTTCTGGCTCATGGAAACCTGTGGAGCTCTTAAAAGTTGAGAAAGGAACTCTGGCCATACATTTTATGGATAAACGCTATGTAGTTTTGGAGAAAGGCCCCTTTTATGACATTCGGATAAGGTCAAGAAAAGCTAATTTAAGAGATTGCTCCTGCGTTCTGAGACCTGGGATTGACATATGTGTGCTATCTTCTTCTCAAACTACTGATGCTTCAGATGAAAATAATCTCGAACATGTGTGGGCTGATGCTAGAATAAGTTCTATACAGAGAAAGCCTCATGAATCTGAGTGCCCATGTCAGTTTTATGTCAACTTTTATGTTAACCAAGGTTCTCTTGGAACAGAAGTGAGAACACTTACTAAAGAGATTAAGGTAGTCGGGATAAATCAAATTTACATACTCCAAAGGCTTGAACGTAGCCCTTGTGAAGATCGGCACTATCGGTGGGATTCATCTGACGACTGCTCTGTATCATCTCAAACTAAATTGCTTCTAGGGAAATTTTTAGCTGACATTTCATGGTTAGTTGTTGCATCAGCGTTAAAGCGGGTTTCATTCTGTGTCAAATCTCTGGAAAACAAGATTGTGTATGAAATCCTGGGAGGTGATGATGACAGCTCTTCATTGAAATCCACATCGTATTTGAACGCTTTAAATTTCAAAGTAGACAAAGACATGTTAGTACCATTTGTTTCTCAAGTTGCGTCATCTGACACCAATGGGGAAAGACATGTACATGACTCTCATGAAGGTGAATTGTCACCATTTAGTACTTCTGAAGGCTTACGACGTTCCAAACGTCGGAATGTACAACCTGAGCGTTACCTTGGCTGTGATGTTGCTCCAGAATTAGATGTTGGTTTTGTTAGAACCAGGCCGTACAAGATGGAGTTATGGAAAGATGATGACAGTGATGATGAAATGTCACTACCATTGTCACGCCTTTTTGGTTTGCAAGCACATCGTCCAGTTGACCTTAGTAAAAAGTTCAATAAGATGAATAAATCCCTAGCGATTCGAGTGTACCGTAGGAGGGGTAAATTCAGGAAGGTAAAGTTGGGTGATACTGGCCAGATTCAGAATGAACATCAAACTGAACTTGCTATTGTTCCTGTGCCTGATGAAAATTATCCAGCAAACCTCGAGTATTATCCTCTTGATGCCAAAGTTACAAGTGATTATACTGCACATGAAAGTGGTGAAATTTCTTCCAAACATTATTACCTAACTGACACCCCTAAACGACAGAGGGAGAAAGTTAACCTGCTAACTTTTGAACCCCATAATGCCCCTGATATCACTTCTGATCTTGAAAACTATAGAAAAGAGAGTGTTCAGATTTACCCCCGATGTTATAATTACAGCACCTCTAAAGTGCAGAGGAAGAATGTATGTGGTCTAGAAGATATGGATCTTGAAAATACATGGGAAGGGAAGTTTTCTAGTAAAGTAGTTCCAGGGAACAGATATCATTCTGCATGTTCAAGAAGTAAAGGGTCAGATGGGGGAAGATATTATAAAGACAGAACCTTGAGTGCTGCTGCATACAAGGACTTGATAGATTCATACTTAAAAAATATGAATAGAACACAAACTAAAGAAGAGACACCTATCACTGACCAGTGGAAACAACTCAAGGCAAAAAGCATCGTGGAGCAAAATAGGGAAACAATATCCAAGAGTGAAGATGAGGAAGAAATCTCTGAGATGGATATGTTATGGAGAGAAATGGAAGTTTCATTGGCATCAAGTTATTTTGAAGACACTGAGGAGGCTTCAAATAGTGCTGTTTTTGACGATGCTCCAGAAAAATCTAGTAAGCCTTGTCGACATGATTATAGGATGGATGATGAAATTGGAATTCACTGCCGTTTTTGTGGTTTCGTGAGCACTGAAATAAAATACATTTTCCCACCTTTTGTGCAATACTCTGGGTGGCACCAAGAGGAGAAGAAGGAAAATGGAGAAGAGTCAGAACCAAAAGATGACGAAGACAACGGTTTCCATCTTCTGTCAACTCATGCTTCTCCTGATGAGCCTATGGCTGAAGAAAGTGATAATGTCTGGGCATTGATTCCTGAGCTTAGAAAAAAGTTGCACCTCCACCAGAAAAAAGCATTTGAGTTTCTTTGGAAAAACATGGCAGGGTCTGTAGAACCAGCATGTATGGAAGCATCATCCAAAAGAACAGGAGGTTGTGTAATATCTCACACTCCAGGAGCTGGGAAAACTTTTCTCATCATTGCATTTCTTGTTAGCTACTTGAAGTTGTTCCCAGGGAAGCGACCTCTTGTTCTTGCTCCAAAGACAACACTCTATACTTGGTATAAAGAATTCATCAAATGGGAAATTCCTATACCAGTGTATCTGATTCATGGTCGTAGAACCTACAGAGCTTTCAATCGGACTGAAATGTATTTTCCCGGTGTTCCAAAGCCCACTGAAGATGTCAAGCATGTTTTGGATTGCCTTGAAAAGATACAGAAGTGGCATGCGCACCCAAGTGTTCTAGTCATGGGTTATACTTCATTTTTAACATTGATGAGAGAGGATGCAAAGTATTCACACAGAAGGTATATGGCTAAAGTATTGAGGGAAAGTCCCGGTTTATTGATACTGGATGAAGGGCACAATCCTAGAAGCACAAAATCAAGGTTGAGGAAAGTTTTAATGAAAGTGGAGACAGAGTTGAGAATATTACTTTCAGGCACATTGTTTCAGAACAACTTCTGTGAGTACTTCAACACACTCTGCTTGGCACGACCCAAGTTTGCTTATGAAGTACTCAAAGAATTGGACCCAAAATACAAGAGGAAAAAGAGATATGCAGAAAAGGCTCGGCATTTAATAGAATCCCGGGCAAGAAAATTCTTCTTAGATAATATTGCAAAGAAGATTGACTCGAATAAGGGTAAAGAAAGGAAGCAGGGTCTGAAAATGTTGAAAAAAATCACAAATGAATTTATTGATGTTTATGAAGGTGGAGGTTCTGACAGTCTTCCTGGTTTACAAATTTATACACTGCTAATGAATACTACTGATATACAACATAAGATATTGCAGAGACTTGGAAGTAGAATGGCTGAGTGCAAGGGATATCCTCTTGAGTTGGAGCTTATGATAACCCTTGGATCAATACATCCATGGTTAATCAAATCAGCTGTATGTGCTGATAGGTTTTTCAGTGTGGAAGAATTGAATGAACTAGATAAATGCAAGTATGATTTAAAGATGGGAACAAAAGTAAAATTTGTTCTGAGCCTTGTGTATCGCGTAGTCAGAAAGGAGAAGGTTCTTATCTTTTGCCACAACATTGCACCTGTAAGACTATTTCTGGAATTATTTGAGAAGGTCTTTGGATGGCAGAAAGGTCGAGAAGTGTTGGTAATAACTGGGGAACTAGAGCTCTTTGAAAGAGGGAGAGTGATGGATCGGTTCGACGAACCCTTTGGAGCATCAAAGGTACTGCTTGCGTCAATTTCAGCTTGTGCTGAAGGAATTAGTTTGACAGCAGCTTCTCGGGTGATTTTGTTGGATTCAGAATGGAATCCATCAAAAACAAAGCAAGCTATTGCACGGGCTTTTCGTCCTGGTCAACAAAAGATGGTTTATGTATATCAGCTTTTAACTGCAAACACATTGGAGGAAGATAAGTATAGAAGAACCACCTGGAAAGAGTGGGTTTCAAGCATGATTTTCAGTGAGGATTTTGTGGAGGACCCTTCTAAATGGCAAGCTGAAAAGATTGAAGATGATATACTGAGGGAAATGGTTGGGGAGGATAGGTCTAAATCGTTCCATATGATAATGAAGAATGAAAAGGCTTCTACAAATTGA 3906 0.3958 MYRKRSLHQSKHPFDSYPFEACLSGSWKPVELLKVEKGTLAIHFMDKRYVVLEKGPFYDIRIRSRKANLRDCSCVLRPGIDICVLSSSQTTDASDENNLEHVWADARISSIQRKPHESECPCQFYVNFYVNQGSLGTEVRTLTKEIKVVGINQIYILQRLERSPCEDRHYRWDSSDDCSVSSQTKLLLGKFLADISWLVVASALKRVSFCVKSLENKIVYEILGGDDDSSSLKSTSYLNALNFKVDKDMLVPFVSQVASSDTNGERHVHDSHEGELSPFSTSEGLRRSKRRNVQPERYLGCDVAPELDVGFVRTRPYKMELWKDDDSDDEMSLPLSRLFGLQAHRPVDLSKKFNKMNKSLAIRVYRRRGKFRKVKLGDTGQIQNEHQTELAIVPVPDENYPANLEYYPLDAKVTSDYTAHESGEISSKHYYLTDTPKRQREKVNLLTFEPHNAPDITSDLENYRKESVQIYPRCYNYSTSKVQRKNVCGLEDMDLENTWEGKFSSKVVPGNRYHSACSRSKGSDGGRYYKDRTLSAAAYKDLIDSYLKNMNRTQTKEETPITDQWKQLKAKSIVEQNRETISKSEDEEEISEMDMLWREMEVSLASSYFEDTEEASNSAVFDDAPEKSSKPCRHDYRMDDEIGIHCRFCGFVSTEIKYIFPPFVQYSGWHQEEKKENGEESEPKDDEDNGFHLLSTHASPDEPMAEESDNVWALIPELRKKLHLHQKKAFEFLWKNMAGSVEPACMEASSKRTGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPIPVYLIHGRRTYRAFNRTEMYFPGVPKPTEDVKHVLDCLEKIQKWHAHPSVLVMGYTSFLTLMREDAKYSHRRYMAKVLRESPGLLILDEGHNPRSTKSRLRKVLMKVETELRILLSGTLFQNNFCEYFNTLCLARPKFAYEVLKELDPKYKRKKRYAEKARHLIESRARKFFLDNIAKKIDSNKGKERKQGLKMLKKITNEFIDVYEGGGSDSLPGLQIYTLLMNTTDIQHKILQRLGSRMAECKGYPLELELMITLGSIHPWLIKSAVCADRFFSVEELNELDKCKYDLKMGTKVKFVLSLVYRVVRKEKVLIFCHNIAPVRLFLELFEKVFGWQKGREVLVITGELELFERGRVMDRFDEPFGASKVLLASISACAEGISLTAASRVILLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTANTLEEDKYRRTTWKEWVSSMIFSEDFVEDPSKWQAEKIEDDILREMVGEDRSKSFHMIMKNEKASTN 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01133 1301 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 54 1300 IPR044567 GO:0080188
Bach12g01133 1301 CDD SF2_C_SNF 1096 1232 - -
Bach12g01133 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1021 1286 IPR027417 -
Bach12g01133 1301 Gene3D - 1024 1301 IPR027417 -
Bach12g01133 1301 Pfam SNF2-related domain 724 989 IPR000330 GO:0005524|GO:0140658
Bach12g01133 1301 MobiDBLite consensus disorder prediction 261 287 - -
Bach12g01133 1301 SMART helicmild6 1136 1221 IPR001650 -
Bach12g01133 1301 Pfam Helicase conserved C-terminal domain 1104 1220 IPR001650 -
Bach12g01133 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 693 961 IPR027417 -
Bach12g01133 1301 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1108 1268 IPR001650 -
Bach12g01133 1301 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 747 946 IPR014001 -
Bach12g01133 1301 Gene3D - 695 988 IPR038718 -
Bach12g01133 1301 MobiDBLite consensus disorder prediction 671 692 - -
Bach12g01133 1301 SMART ultradead3 718 962 IPR014001 -
Bach12g01133 1301 MobiDBLite consensus disorder prediction 671 704 - -
Bach12g01133 1301 CDD DEXHc_ATRX-like 722 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01133 Bach-Chr12 7897831 7903286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01133 1147 1239 RAD5 or RAD16-like Gene Family AT5G05130 39.362 5.53e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach12g01133 SNF2_N 2.8e-16 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01133 K10875 - qsa:O6P43_013801 1722.6