Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01109 ATGGGTGCTGTTAGTAACATCTGCTTCTCTTCACTGTTCACAGCTCCTCTCGGGATTGGTGTGCTCTCAAAGCAGACGAAGAAGAAACCGGCATGCCATTTCATGGTTCCGATTCGGAACGACTCTATCAGGTTGAATGGAGTCTATTGTAAACTATCCGATACTGGAATTGAGGAAATCCCCGCAAGCAAGGGGGCCTCTAATTACAAAAATAGAATGGAGGAGTACAACACAGCTATGAAGAGGCTGATGAAGAACCCATATGAATATCACCACGAACTGGGTATGAATTACGCACCAATAACTGATAATTTGATTGTGGGCTCCCAGCCACAGAAACCTGAAGACATAGATCACCTCAAAACGGAAGGTGTAGCTTACATTCTGAACTTGCAACAGGATAAAGATGTGGAGTATTGGGGAATAGACTTACAGTCAATAAAAAGAAGATGTCATCAGCGTGGCATCCGTCACATGAGGAGGCCTGCAAAAGACTTCGATCCAAAGTCCTTGCGAAATGAACTACCTAAAGCAGTTTCATCATTGGAGTGGGCCATTTCCGAGGGAAAAGGAAGAGTTTATGTGCATTGCACAGCTGGACTTGGAAGGGCTCCTGCAGTGGCAATTGCTTATTTGTTCTGGTTTTGTGGCATGAACCTAAACGCAGCATATGATATGCTAACATCGAAGAGACCTTGTGGACCCAATAGAAGAGCAATACGTGGAGCTACTTTTGATTTGGTTAAGAATGATCCATGGAAGGAATCATTTGAGAGTCTTACAGAATATGCATTTGAGGATATAGCAGACTGGGAGAGGAACTTGATTCAAAACCGTGTCCATTCCCTTCGCGGAACTTGA 861 0.4402 MGAVSNICFSSLFTAPLGIGVLSKQTKKKPACHFMVPIRNDSIRLNGVYCKLSDTGIEEIPASKGASNYKNRMEEYNTAMKRLMKNPYEYHHELGMNYAPITDNLIVGSQPQKPEDIDHLKTEGVAYILNLQQDKDVEYWGIDLQSIKRRCHQRGIRHMRRPAKDFDPKSLRNELPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYLFWFCGMNLNAAYDMLTSKRPCGPNRRAIRGATFDLVKNDPWKESFESLTEYAFEDIADWERNLIQNRVHSLRGT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01109 286 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 58 256 - -
Bach12g01109 286 CDD DSP_laforin-like 96 242 IPR045204 GO:0019203
Bach12g01109 286 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 90 238 IPR029021 -
Bach12g01109 286 SMART dsp_5 101 246 IPR020422 GO:0006470|GO:0008138
Bach12g01109 286 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 80 286 - -
Bach12g01109 286 Coils Coil 66 86 - -
Bach12g01109 286 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 253 IPR020422 GO:0006470|GO:0008138
Bach12g01109 286 Gene3D Protein tyrosine phosphatase superfamily 80 286 IPR029021 -
Bach12g01109 286 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 232 IPR000387 GO:0016311|GO:0016791
Bach12g01109 286 Pfam Dual specificity phosphatase, catalytic domain 107 235 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01109 Bach-Chr12 7739111 7741166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01109 45 286 Protein tyrosine phosphatase (PTP) family AT3G10940 76.230 1.28e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01109 - - qsa:O6P43_014826 439.884