Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01090 ATGCGTGCATTGTTGAACATGATGTCTCTCGCCTGCTTGTTCTTGTTCCTTCTGGTAGCTCCAGTGTTCGTCAAATCTGTTAATCCATCTCTCAACGACGACGTTCTGGGGCTAATTGTGTTCAAAGCTGATGTACAAGATCCGAAGAGAAAACTGTCATCATGGAATGAAGACGATGAAACTCCCTGTAGCTGGGACGGTGTGAAATGCAGCCCTAGATCCAACAGGGTCATTGAGCTCAACCTCGACGGGTTCTCTCTTTCGGGTCGGATAGGTCGAGGTCTCCTCCAGTTGCAGTTTCTTAGAAAGCTTTCTCTCGCGAAGAACAATCTCACCGGGAGCATAAGTCCCAACATTGCTCGAATCGATAACCTTCGAGTAATTGACTTGAGTGAGAACAGTTTGTCAGGAGAGGTGCCCGACGAATTTTTCCGACAATGTGGGTCTCTGAGAGCAGTTTCTCTGGCGAGGAACAAGTTTACTGGGAAGATTCCGTCTACTTTGAGCTTATGTTCAACACTTTCTGCGATTGACTTATCGTTTAACCAGTTTTCAGGTTCTCTTCCTTCTGGAATTTGGACTTTGAGTGGACTGAGATCGTTGGATTTGTCTGATAATTCGTTGGAGGGCGAGATTCCAAAGGAAATTGAAGGATTGAAGGATTTGCGAGCAATTAACTTGGCCAGAAACCGGTTTTCTGGCGAGGTCCCGAATGGGATTGGAAGTTGCTTGCTTTTGAGGTCTATTGATCTCAGCGAGAATTCCTTTTCCGGGAACTTTCCAGATATCCAGGAGTTCACCTTGTGTAATTACCTTAGCTTGCGTGGAAACGCTTTTTCTGGTGAGGTTCCTGTGTGGATTGGGGAAATGAAAAGCCTTGAGACTCTGGACCTCTCTCTGAACAGATTTTCTGGTAAGGTGCCAAACTCTCTTGGAAATCTTCAGTCGTTGAAGACAATGAATTTTTCCGGAAATGGCTTCACTGGGAATCTGCCTGATTCTATGATCAATTGCACAAACCTCTTAGTTTTAGACTTCAGCCAGAATTCATTGTCCGGTGGTCTTCCATCGTGGATTTTCAAGTCAGATTTACAGAAGGTTTTGGTCTCAGAAAGTAAATTGACTTCAAGCCTGAAAAGCCCTTTAAATTCCTTGGTGGAAGTTGCGGTTCCAAAGCTTCAATTCTTGGATTTATCTGACAATGGATTTTCTGGCGAAATTCCATCTACTATTGTAGTTTTAAGCAGCTTGCAGTTATTGGATTTATCAAATAACTCTCTCAAGGGCCCTATACCAGCTGCCATTGAAGAATTGAAGTCGCTTTATAGTCTTGATTTGGGTGAGAATCAGCTAAATGGAAGCATACCTGTGGAAATAGGAGGAGCAGTGTCTTTGAAGGAACTGAGATTGCAAAATAACTTCCTAGTTGGGAAAATTCCGACCACAATTGAGAACTGCTCTTCACTATCGACTTTGATTCTATCACAGAACAGGTTAACTGGCTCAATACCTTCAGCAGTTGCAAAGCTTACCAACCTACAAGTTGTGGACTTGTCTTACAACAACCTTACTGGAAACCTTCCCAAGCAATTGGCCAATCTCCCTAACCTTCTTTCTTTCAATTTATCTCACAATAACCTCCAGGGTGAACTGCCTGCTGGTGGATTTTTCAACACTATTTCGCCTTCTTCTGTTGCTGGCAACCCATCTCTTTGTGGTTCTGCAGTCAATAAATCATGTCCTGCTGTCCTTCCAAAGCCTATTGTCTTAAATCCCAACACTTCTACCGATTATTTACCAGGTTCACTACCTCCAAATATTGGTCACAAGAGAATCATTCTCAGCATTTCTGCACTCATTGCCATCAGTGCAGCTGCTGTTATTGTAATTGGTGTCATTGCCATCACTGTTCTCAATCTCCATGTTCGGTCTGCCGCATCTCGATCTGCGGCTGCACTCGCATTATCTGCAGGGGATGAATACAGCAATTCCTCAGCTACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCAGGTGAACCTGACTTCAGCACTGGAGCACATGCTTTGCTTAATAAGGATTGCGAGCTTGGGCGTGGTGGTTTTGGAGCAGTGTATCAAACAGTTCTTGGAGATGGGCGCTCAGTTGCAATCAAGAAGCTCACTGTATCAAGTCTTGTCAAGTCTCAGGAAGATTTTGAAAGAGAAGTGAAGAACTTAGGAAAAGTCCAACACCAGAATCTTATGGCACTTGAAGGTTATTATTGGACTCCATCACTTCAGCTCCTCATTTATGAATATGTCTCTGGGGGTAGTCTGTACAAGCATCTCCACGAAGGATCAGGTGGAAACTTCCTCTCATGGAATGATAGATTTAATGTAATTCTTGGCACAGCAAAAGCCTTAGCTCACTTGCACCACTTGAACATTATTCATTATAACATTAAGTCAACTAATGTCCTCATCGACGGCTCTGGTGAACCTAAAGTAGGAGACTTTGGCCTTGCAAGGTTGTTACCAATGCTTGACCGTTATGTCTTGAGCAGCAAAATTCAAAGTGCACTTGGCTACATGGCACCAGAATTTGCTTGCAAGATGGTAAAGATAACTGAGAAATGTGATGTATATGGGTTTGGAGTTTTAGTTTTGGAGGTGGCCACAGGTAAGAGGCCTGTGGAATACATGGAAGATGATGTGGTGGTGCTTTGTGACATGGTCAGAGGAGCTTTGGAAGAAGGCAGGGTGGAGGAATGTATTGATGGGACGTTGCAGGGCAAGTTCCCGGCCGAGGAAGCAATTCCAGTAATTAAGTTAGGTTTGATATGTACATCTCAAGTGCCATCCAACCGGCCAGACATGGGAGAGGTAGTTAACATATTGGAGCTCATAAGATGGCCTTCAGAAGGACAAGAGGAGTTGGTATGA 2925 0.4393 MRALLNMMSLACLFLFLLVAPVFVKSVNPSLNDDVLGLIVFKADVQDPKRKLSSWNEDDETPCSWDGVKCSPRSNRVIELNLDGFSLSGRIGRGLLQLQFLRKLSLAKNNLTGSISPNIARIDNLRVIDLSENSLSGEVPDEFFRQCGSLRAVSLARNKFTGKIPSTLSLCSTLSAIDLSFNQFSGSLPSGIWTLSGLRSLDLSDNSLEGEIPKEIEGLKDLRAINLARNRFSGEVPNGIGSCLLLRSIDLSENSFSGNFPDIQEFTLCNYLSLRGNAFSGEVPVWIGEMKSLETLDLSLNRFSGKVPNSLGNLQSLKTMNFSGNGFTGNLPDSMINCTNLLVLDFSQNSLSGGLPSWIFKSDLQKVLVSESKLTSSLKSPLNSLVEVAVPKLQFLDLSDNGFSGEIPSTIVVLSSLQLLDLSNNSLKGPIPAAIEELKSLYSLDLGENQLNGSIPVEIGGAVSLKELRLQNNFLVGKIPTTIENCSSLSTLILSQNRLTGSIPSAVAKLTNLQVVDLSYNNLTGNLPKQLANLPNLLSFNLSHNNLQGELPAGGFFNTISPSSVAGNPSLCGSAVNKSCPAVLPKPIVLNPNTSTDYLPGSLPPNIGHKRIILSISALIAISAAAVIVIGVIAITVLNLHVRSAASRSAAALALSAGDEYSNSSATDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYQTVLGDGRSVAIKKLTVSSLVKSQEDFEREVKNLGKVQHQNLMALEGYYWTPSLQLLIYEYVSGGSLYKHLHEGSGGNFLSWNDRFNVILGTAKALAHLHHLNIIHYNIKSTNVLIDGSGEPKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKMVKITEKCDVYGFGVLVLEVATGKRPVEYMEDDVVVLCDMVRGALEEGRVEECIDGTLQGKFPAEEAIPVIKLGLICTSQVPSNRPDMGEVVNILELIRWPSEGQEELV 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01090 974 SMART LRR_typ_2 438 462 IPR003591 -
Bach12g01090 974 SMART LRR_typ_2 122 146 IPR003591 -
Bach12g01090 974 SMART LRR_typ_2 290 313 IPR003591 -
Bach12g01090 974 SMART LRR_typ_2 534 558 IPR003591 -
Bach12g01090 974 SMART LRR_typ_2 414 437 IPR003591 -
Bach12g01090 974 SMART LRR_typ_2 219 243 IPR003591 -
Bach12g01090 974 SMART LRR_typ_2 195 218 IPR003591 -
Bach12g01090 974 SMART LRR_typ_2 510 533 IPR003591 -
Bach12g01090 974 Gene3D Ribonuclease Inhibitor 310 584 IPR032675 -
Bach12g01090 974 PRINTS Leucine-rich repeat signature 198 211 - -
Bach12g01090 974 PRINTS Leucine-rich repeat signature 414 427 - -
Bach12g01090 974 Pfam Protein tyrosine and serine/threonine kinase 693 958 IPR001245 GO:0004672|GO:0006468
Bach12g01090 974 Gene3D Transferase(Phosphotransferase) domain 1 768 972 - -
Bach12g01090 974 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 30 960 - -
Bach12g01090 974 SUPERFAMILY Protein kinase-like (PK-like) 695 966 IPR011009 -
Bach12g01090 974 Pfam Leucine rich repeat 391 451 IPR001611 GO:0005515
Bach12g01090 974 Pfam Leucine rich repeat 173 232 IPR001611 GO:0005515
Bach12g01090 974 Pfam Leucine rich repeat 488 547 IPR001611 GO:0005515
Bach12g01090 974 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Bach12g01090 974 Pfam Leucine Rich Repeat 464 486 IPR001611 GO:0005515
Bach12g01090 974 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Bach12g01090 974 SMART LRR_sd22_2 414 440 - -
Bach12g01090 974 SMART LRR_sd22_2 510 536 - -
Bach12g01090 974 SMART LRR_sd22_2 195 221 - -
Bach12g01090 974 Gene3D Ribonuclease Inhibitor 189 263 IPR032675 -
Bach12g01090 974 ProSiteProfiles Protein kinase domain profile. 691 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01090 974 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 768 969 - -
Bach12g01090 974 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 310 584 - -
Bach12g01090 974 SUPERFAMILY L domain-like 31 262 - -
Bach12g01090 974 Gene3D Ribonuclease Inhibitor 264 309 IPR032675 -
Bach12g01090 974 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 32 309 - -
Bach12g01090 974 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Bach12g01090 974 Gene3D Phosphorylase Kinase; domain 1 684 767 - -
Bach12g01090 974 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 685 767 - -
Bach12g01090 974 SUPERFAMILY RNI-like 264 558 - -
Bach12g01090 974 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Bach12g01090 974 CDD STKc_IRAK 697 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01090 Bach-Chr12 7622565 7626168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01090 8 973 Receptor kinase-like Gene Family AT3G56370 69.136 0.0 1290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bach12g01090 PK_Tyr_Ser-Thr 9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01090 - - qsa:O6P43_014848 1451.42