Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01083 ATGCTCAGAACTAGTAGGACACCATTGCTTACCCTGAGGATGCTATCATCGTCACCGTCATCTTCCGCTGCTTTTGATACTAAACTACCTTCTACTATCAGAACCTTAGATAGGAATCCCAAATCTTCTTTCTGTCACCTTCCTCTGTTCTCCAACTCTGAAAAGAGCCCCCAAACTATGACGCTTTCCAGATGCTTTTCCGGGGTTACTAGCCCCATCCCCATATCGGTGAATCCTGAAACGAGAAGCCCAGAACTGGAATCCGGTGACCCTCAATCTCTTGTAGTGGTCTCCTTCTACAAGTTCGCTGATTTTCCTGACCATGCTCATATGAGGAAACCCCTGAAGGAACTTTGTGAAGAACTGCGTGTCTCAGGCGGTATCATTCTTGCACCTGAAGGAATCAATGGCAGCATATGTGGAACCCGGGAGTCTGTGGAAAAAGTTCTTTCTTTCATACAAAGTGATAACCGCCTAAAGGGACTAAGACAAGTGGAATCACCTGTAAGCCCTGAGGAAGAAGCTATCCATCATGGACATAGTACTAGCTCTCCTCTTGCTGCAGGGGAAGATGCACCCTTCCGATGGGATCACGTGAGGGTCAAGTTGAAGAAAGAGATTGTTACACTTGGGATGCTTAATGTATCCCCGAATGAAAGAGTTGGAAAGTATGTTAGCCCAAGGGATTGGAATGCTTTGATTAATGATCCAGATACAGTGGTGATTGATGTGCGCAATAACTATGAAACCAGAATAGGGAAATTTAAAGGAGCAGTTGATCCATCTACGATATCATTTCGTGAATTCCCGTCCTGGGTGGAGGATCATTTCCAGCTGAAGAAAAAAGACAGCAAGCATCCAATTGTTGAGGTGGGCAATTCATGTCCAAGTGCTGACAACGAAACAGATAATCTGAAACAAAATATGCCTCGTGTTGCAATGTACTGCACTGGAGGTATCCGATGTGAGAAAGCTACAAGTTTCCTCCTCAGCAAAGGTTTCAATGAGGTTTATCATTTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCCAAGACTGAGAGCCTCTGGGAGGGTGAGTGCTTTGTGTTTGACAAACGAGTCTCTGTTGAGCATGGGTTGGTGCAAGGAAATTTCAAGCTCTGCTATGGTTGTAAACAGCCCATCAGTGATGCTGACATGGAAGCTCCAGAATATGAATATGGAGTTTCTTGCCCTCACTGTTTTGTACTGAAATCAGATGAAGAGAAGGAAAGGGCTCGAGCTCGTCAAAGACAATTTGAAAGATGGGGGATCATAGGTGGTCCAGACAAGGGTCGCCGACCAACATGTAAACCAGATAGTATCAGTCGGAAGTCTAACCAGCTTTTACGTTCCATTTAA 1386 0.4488 MLRTSRTPLLTLRMLSSSPSSSAAFDTKLPSTIRTLDRNPKSSFCHLPLFSNSEKSPQTMTLSRCFSGVTSPIPISVNPETRSPELESGDPQSLVVVSFYKFADFPDHAHMRKPLKELCEELRVSGGIILAPEGINGSICGTRESVEKVLSFIQSDNRLKGLRQVESPVSPEEEAIHHGHSTSSPLAAGEDAPFRWDHVRVKLKKEIVTLGMLNVSPNERVGKYVSPRDWNALINDPDTVVIDVRNNYETRIGKFKGAVDPSTISFREFPSWVEDHFQLKKKDSKHPIVEVGNSCPSADNETDNLKQNMPRVAMYCTGGIRCEKATSFLLSKGFNEVYHLEGGILKYLEEVPKTESLWEGECFVFDKRVSVEHGLVQGNFKLCYGCKQPISDADMEAPEYEYGVSCPHCFVLKSDEEKERARARQRQFERWGIIGGPDKGRRPTCKPDSISRKSNQLLRSI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01083 461 Gene3D - 209 390 IPR036873 -
Bach12g01083 461 Hamap tRNA uridine(34) hydroxylase [trhO]. 92 393 IPR020936 -
Bach12g01083 461 CDD RHOD_YceA 222 349 - -
Bach12g01083 461 MobiDBLite consensus disorder prediction 165 189 - -
Bach12g01083 461 Pfam UPF0176 acylphosphatase like domain 95 207 IPR040503 -
Bach12g01083 461 Pfam Rhodanese-like domain 229 349 IPR001763 -
Bach12g01083 461 MobiDBLite consensus disorder prediction 435 454 - -
Bach12g01083 461 Gene3D - 84 208 - -
Bach12g01083 461 SMART rhod_4 225 353 IPR001763 -
Bach12g01083 461 ProSiteProfiles Rhodanese domain profile. 235 356 IPR001763 -
Bach12g01083 461 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 87 421 IPR020936 -
Bach12g01083 461 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 205 382 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01083 Bach-Chr12 7577437 7580498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01083 90 460 Sulfurtransferasese or Rhodanese AT2G40760 76.408 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01083 - - qsa:O6P43_020086 697.967