Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01070 ATGGAAACTTCGGGTGCTAATTCAGACCAATACGCCAATTCTTCTGCATCATCATCTGCAGGAGGTTTAAATATTACTACTAACAGTAATAGCAATGCTGTAACATGGTATGGGATGCGGTTGCCTGCTGTGAGCCCCTTACGTTCTCCACTTTCTTTTTTGTTGGATTACTCGGGCATTCTCCGCTCAAGTTCCACTTCCCATGATTATGGGGCTGTAACAGCCAACGACAGTGTTCCCTCTTCGGAATTACGACCCCATCTTCGAATTCAGCCGCTTGGCCCTGCTGCTGGCACCTCGTGCAGTAGTACCAGCAGTACTGGGGAGGTTTCTATACGGATCATTGGGGCCGGAGAACAAGACCACAATGCAGGGTTAGGTTCTGTTTCTTCACCTCCCCAAAATCAGCTTGGAGAAGTTGGGTATGTTGATAATGATGATTTGATGAGAAATAGAGGTATAGTGCCCTCATTGGATGATGATGATGAAGAGGGCCGTAGTGGAATTTTGGTTGGCGAGAGAGTTCCTCTCGTCTCTTCATCTTCATCAACTGGTAGTGGACATGTAGATGCGGACACTGGTGAGGGCTTGGACAGTAACAGTAGGGGTTCATCCTCTTATCAACGCTATGATATTCAGCAGGTTGCCAAGTGGATTGAGCAGATTCTTCCTTTCTCTTTGTTGTTATTGGTGATTTTCATTCGTCAGCATTTGCAAGGTTTCTTTGTCACAATTTGGATTTCAGCTGTTATGTTCAAGTCTAATGAAATTGTTAAGAAGCAGACTGCTCTAAAGGGAGATAGAAGAGTGCCTATGCTTGTTGGTATCTCTTTTGCTTTCATGCTTCACGTAATGTGCATTTACTGGTGGTATCGGAGCGATGATCTTTTATACCCACTGGTCATGTTTCCTCCAAAAGTAACGCCTCCTTTCTGGCACGCAATATTCATCATTTTGGTCAATGATACACTGGTGAGGCAAGTAGCAATGGCTTTCAAGTGTTTACTTCTTATATATTACAAGAATGGAAGAGGCTACAACTACCGTCAACAGGGTCAAATGTTAACTCTGCTTGAGTACGCACTGCTGTTGTATCGAGTATTGTTGCCAACACCAGTTTGGTACCGATTTTTCTTAAACAAGGATTATGGAAGTCTATTTTCATCACTGACAACAGGGTTGTATTTAACTTTCAAGCTAACTTCTGTTGTTGAGAAGGTCCAGTGCTTCTTTTCTGCCTTAAAAGCATTATCAAGAAAGGAAGTTCATTATGGGGTTTACGCCACAATGGAACAGGTAAATGCAGCAGGCGATCTATGTGCTATATGCCAAGAGAAGATGCATGCTCCTATCTTGTTGCGCTGTAAACATATTTTCTGTGAGGAGTGTGTGTCAGAATGGTTCGAGAGAGAAAGAACCTGCCCACTATGCAGGGCATTGGTGAAACATGCTGATCTGCGGACCTTTGGGGATGGGTCAACAAGTCTGTTTTTCCAGTTGTTTTAACTAAAGTATTTTGGGTTAGATCACAAAATTGAGCCAAAACTTACACGTAAATTATCTCATTGAGTACTTCAATTTGTTAAAATTTCTCATCAAAGGATTCCTCATTTCCTAGAAGATCAGATTGTAAGAGGACATGGCCTGAGTACATGTTCGCATGTTGTTTTGTTCAGTTGTAGAAAGGGATTTACCATGCTGCCGGATACTTGAAACACGAATATTATGAATTCAACATTTGTTCATAAAGTTGTAGCATTATCCCCTCCCCCCAAGCCCCAACTCCTTTTTTTTTTTAATATGTACAAGCTGAAGCTTGAGCAACTATATTTGAAGAGTTAGCTGTCGCAATTGCAAGTGGTGAA 1865 0.4214 METSGANSDQYANSSASSSAGGLNITTNSNSNAVTWYGMRLPAVSPLRSPLSFLLDYSGILRSSSTSHDYGAVTANDSVPSSELRPHLRIQPLGPAAGTSCSSTSSTGEVSIRIIGAGEQDHNAGLGSVSSPPQNQLGEVGYVDNDDLMRNRGIVPSLDDDDEEGRSGILVGERVPLVSSSSSTGSGHVDADTGEGLDSNSRGSSSYQRYDIQQVAKWIEQILPFSLLLLVIFIRQHLQGFFVTIWISAVMFKSNEIVKKQTALKGDRRVPMLVGISFAFMLHVMCIYWWYRSDDLLYPLVMFPPKVTPPFWHAIFIILVNDTLVRQVAMAFKCLLLIYYKNGRGYNYRQQGQMLTLLEYALLLYRVLLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTSVVEKVQCFFSALKALSRKEVHYGVYATMEQVNAAGDLCAICQEKMHAPILLRCKHIFCEECVSEWFERERTCPLCRALVKHADLRTFGDGSTSLFFQLF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01070 501 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 416 488 IPR013083 -
Bach12g01070 501 ProSiteProfiles Zinc finger RING-type profile. 440 478 IPR001841 -
Bach12g01070 501 SMART ring_2 440 477 IPR001841 -
Bach12g01070 501 ProSitePatterns Zinc finger RING-type signature. 455 464 IPR017907 -
Bach12g01070 501 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 20 501 IPR044235 GO:0061630|GO:1904294
Bach12g01070 501 SUPERFAMILY RING/U-box 430 483 - -
Bach12g01070 501 MobiDBLite consensus disorder prediction 178 205 - -
Bach12g01070 501 CDD RING-HC_RNFT1-like 438 478 - -
Bach12g01070 501 MobiDBLite consensus disorder prediction 1 24 - -
Bach12g01070 501 Pfam Zinc finger, C3HC4 type (RING finger) 438 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01070 Bach-Chr12 7510158 7515154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01070 1 501 C3H Transcription Factor Family AT5G01960 58.367 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01070 - K22379 qsa:O6P43_020068 723.005