Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01054 ATGAAAACCATACTCTCATCTGAGTCCATGGACATCCCTGATGGGGTGAGTATCAAGGTGAATGCCAAAATCATCGAGGTGGAGGGTCCCCGCGGCAAGCTCGTTCGGGACTTCAAACACCTCAACCTCGATTTCCAGCTTATCACCGATGAGAATGGAAAGAGGAAGCTGAAGATCGATGCATGGTTTGGATCCCGAAAGACATCTGCTGCTATCCGCACTGCTCTCAGCCATGTAGAGAATCTCATAACTGGTGTTACTAAGGGCTATCGCTACAAGATGCGTTTCGTCTATGCTCATTTTCCCATCAATGCCAGCATCACCAATGCGAACAAGTCTATCGAGATCAGGAACTTCCTTGGTGAAAAAAAGGTAAGGAAAGTGGACATGCTTGATGGTGTTTCTGTTGTACGGTCTGAGAAAGTAAAGGATGAGTTGATCTTAGATGGCAATGATATTGAGCTCGTTTCTCGGTCGTGCGCCCTCATTAATCAGAAATGCCATGTTAAGAACAAAGATATTCGGAAGTTCCTTGATGGCATATACGTCAGTGAGAAGGGGGCAGTAGTTGAAGAGTCTGGTTAATAGTCATATTGAAGTTAGCTTTTGAGATAATTTTGTTCGGTTTCAATGGCGCTGGAGACATTCTTGTTACCTTGTTTGAATTTGGATACAATTTTGTGTTGAAAACTATCGTTTCAAAAAGATGTTATCTAAAATTTTTGATAGCTTTATATGCTTTGGAATGGAATATTTCTTGTGTGTTGCTGATCA 774 0.4212 MKTILSSESMDIPDGVSIKVNAKIIEVEGPRGKLVRDFKHLNLDFQLITDENGKRKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNANKSIEIRNFLGEKKVRKVDMLDGVSVVRSEKVKDELILDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGAVVEESG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01054 194 FunFam 60S ribosomal protein L9 1 89 - -
Bach12g01054 194 PIRSF RPL6p_RPL6a_RPL9e_RPL9o 1 189 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach12g01054 194 SUPERFAMILY Ribosomal protein L6 1 89 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach12g01054 194 Pfam Ribosomal protein L6 102 180 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach12g01054 194 Pfam Ribosomal protein L6 12 89 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach12g01054 194 Gene3D - 90 193 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach12g01054 194 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 1 191 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach12g01054 194 FunFam 60S ribosomal protein L9 90 193 - -
Bach12g01054 194 SUPERFAMILY Ribosomal protein L6 90 186 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bach12g01054 194 ProSitePatterns Ribosomal protein L6 signature 2. 165 186 IPR002359 GO:0003735|GO:0005840|GO:0006412
Bach12g01054 194 Gene3D - 1 89 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01054 Bach-Chr12 7395730 7397400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01054 1 192 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 84.974 1.80e-121 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01054 K02940 - gmx:100306058 363.999