Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01050 ATGGCTGTGTTGTCTCTAAGTTCGCTGCCTCTGGGGTTCCGATTCCGGCCCACGGATGAGGAACTCATTGATTACTATTTGCGAGCGAAGATCAACGGAAACGACGAAGAAGTTAGGGTTATTCGGGAAATTGATGTCTGCAAATGGGAGCCGTGTGATTTACCAGATTTGTCGGTGATACAGTCCAGGGATCCGGAGTGGTTCTTTTTCTGCCCCCAGGATCGTAAGTATCCAAATGGGCATCGATTGAACCGGGCAACCGCTAATGGCTATTGGAAGGCGACGGGCAAGGATCGTAGGATTAAATCTGGAACGACCTTAATTGGAATGAAGAAGACTTTAGTCTTCTATACTGGTCGTGCGCCCAAAGGGAAGAGGACGCATTGGGTTATGCATGAGTACCGTCCAACTTTAAAGGAGCTGGATGGTACCAATCCTGGACAGAATGCATTTGTCCTTTGTCGGTTATTTAAGAAACACGATGAAAGTCTCGAAGGTTCAAATTGTGAAGAATTGGGGCGAACTGTGTCAACTCCCAAATATTCGCCGGAAGAAATACAGCCTGATATAGGTCTGCTTGAAGGGTCCCCGTCACAGGTAACTGAAGAAGATCATAAGCGCCTTGGAGTTCCATTATCTGTTACTGAGAACTCTGAAGAAGCAACTTCCAATGTTATAACAGTGACTGGTTGCCAGAGTGATGGATGTGATGTTGATGATGCCCAACGTCAAATGGCACAACCAACACCTACAGAGGTTGATCTGCTGGAGAACTTGGACTTTTTTTTCAACCCAAATGGTGAGGTGGATGACAAACTTTTCTCCCCATTACATGTGCACATGCCACAACACATGTGTTACCAAGTAAATAATGAAGCAGAGTATGGTACAAACGAGGGAAATTTTCCAGAGTTATTGGACTCAGGTTTTAATTGGGGTGAGCACTCATGTTGGGCGTCCAACATTCAGAAAACCCCCACCATTTTTTGTGGTAAGGACAATGGATCAGGCAGTGACTCAGAGGTGGAAACGGCCAGTGCCCCATTTGTGCCAACTTTGCAAACTGGATGGCCTGAGGGAAACATTGACAGGAGGCCTCCTTTTATGGGGGCAGCTCCGGAAGTTTACAGCACCATCATCTCGGACCTTAGCGGAAATCAGCAGAGGAGCAATGTGGGATTATTGCAAAACAATTCCCAGATGGCTTCCTTACCTGATGTTGCTGGCCAAGTGTACAATGGGTTCAATATTTATATGGAATCAGGAAACTATAATCCAGTTGCTTATGGTGATAATGGTCCTGGAATCAAGATAAGGACTCGTCAAGCACGAAATGAGTTTCCTAACATGGATCCTCTAGCCCAAGGTTCCGCGCGTAGAAGGATACTCCTGCAATGCGGCCCACGTCGTTTGTTAAAACAAGGGAGCTGCGAACCAAAAGACGATGAATCAAAACAAGTCGTTGCAGGGGAGAGGCAAGTTTCAGAAAATCATGCTGCAGATAAGACTGCTACTGATACCAAGGTTGAGAATGAATCCCAGAAGTCATCTCTTGACTCAACCGACAAGAGTAAGATTTCTCGGCAACATGTTACAAAGGCGAATTCCATCTCGGAGTTAAAAGAAGGTCTATTGTTAGGGGTCCCTGTCAAATCAAAGCCTTGCATTAGCCGCAAAATCTGGTCATATGTTGTATTTATTGTCGTGGTCGTGGTGTTATTAGTCTTCTTTGCTAACATATGGGGATATCTTAAATTTTGAACTGCTAGGAAATCATTCGTGTAATTTGCCCCAACGCTTTTTTGTGGGGGATTTGAACTGATGAGAAGGCATTCTAGGATTGATTTTGTTAGTGTTGTTGATAATTCCATGTGTAGATGTAGTCAGTGGTTACATAATATGCTCAGCCAGTACCTATCCTGCTGTACAATAGTTTCAATGTTTATATTTTCTGGCACATTTCAA 1965 0.4448 MAVLSLSSLPLGFRFRPTDEELIDYYLRAKINGNDEEVRVIREIDVCKWEPCDLPDLSVIQSRDPEWFFFCPQDRKYPNGHRLNRATANGYWKATGKDRRIKSGTTLIGMKKTLVFYTGRAPKGKRTHWVMHEYRPTLKELDGTNPGQNAFVLCRLFKKHDESLEGSNCEELGRTVSTPKYSPEEIQPDIGLLEGSPSQVTEEDHKRLGVPLSVTENSEEATSNVITVTGCQSDGCDVDDAQRQMAQPTPTEVDLLENLDFFFNPNGEVDDKLFSPLHVHMPQHMCYQVNNEAEYGTNEGNFPELLDSGFNWGEHSCWASNIQKTPTIFCGKDNGSGSDSEVETASAPFVPTLQTGWPEGNIDRRPPFMGAAPEVYSTIISDLSGNQQRSNVGLLQNNSQMASLPDVAGQVYNGFNIYMESGNYNPVAYGDNGPGIKIRTRQARNEFPNMDPLAQGSARRRILLQCGPRRLLKQGSCEPKDDESKQVVAGERQVSENHAADKTATDTKVENESQKSSLDSTDKSKISRQHVTKANSISELKEGLLLGVPVKSKPCISRKIWSYVVFIVVVVVLLVFFANIWGYLKF 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01050 586 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Bach12g01050 586 MobiDBLite consensus disorder prediction 474 529 - -
Bach12g01050 586 Pfam No apical meristem (NAM) protein 10 135 IPR003441 GO:0003677|GO:0006355
Bach12g01050 586 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Bach12g01050 586 MobiDBLite consensus disorder prediction 473 529 - -
Bach12g01050 586 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Bach12g01050 586 FunFam Nac domain-containing protein 86 18 162 - -
Bach12g01050 586 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01050 Bach-Chr12 7369696 7372855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01050 1 198 NAC Transcription Factor Family AT4G35580 68.182 1.05e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach12g01050 NAM 3.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01050 - - gmx:100778903 555.444