Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01032 GCTAGCTTCAACTTCTACCTGAGCTGATTTCGCTTCACGGAGGGACTTGGTCGATTTGACGGTGTAGGCTTCAGCGCAAGATCTTATCTCCGAGGAATTCTATCACCGTTTCTAATTGAATATGAGTGGTCGCTTTTCTCGCACAATTTATGTTGGCAATCTGCCTGCTGACATAAGGGAATCAGAAGTAGAAGACCTGTTCTACAAGTATGGTCGAATATTGGATATTGAATTGAAGATTCCACCTCGTCCTCCATGTTATTGTTTTGTTGAGTTTGACAATGCTCGAGATGCAGAAGAAGCTATCCATGGTCGTGATGGCTACAACTTTGATGGGTGTAGATTAAGGGTGGAGCTTGCCCATGGTGGTAGAGGGCCATCATCAAGTGATCGTCGTGGTTATGGTGGTGGCAGTGGTGGGGGCCGTTTTGGCATGTCACGCCATTCTGAGTATCGAGTTATTGTTCGTGGACTTCCATCATCTGCATCCTGGCAAGATTTGAAGGATCATATGCGAAAAGCTGGTGATGTGTGTTTTGCTGAGGTTTCCCGTGACAGTGAAGGTACTTTTGGTGTTGTTGACTACACTAATTTTGATGACATGAAATACGCCATTCGGAAACTGGATGACACTGAGTTTAGAAATCCTTGGGCAAGAGCTTTTATTCGGGTGAGGAAGTATGAGGATAGTCCATCCAGGAGCCGAAGCAGAAGCAGAAGCAGAAGTCCCAAAAGAATTAGAAGTAAGTTGGACCGATCTGTCTCGAGGTCTCCATCAAGATCCAGATCAGCATCGCCTATTAAACCTTCCAGGCCAAGATCTCAATCACGGTCAAGATCACCATCAAGATCAAGATCTGTGTCTCCACGCCAGGTGCGATCAGGTAGTGATTGA 895 0.4581 MSGRFSRTIYVGNLPADIRESEVEDLFYKYGRILDIELKIPPRPPCYCFVEFDNARDAEEAIHGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGSGGGRFGMSRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGVVDYTNFDDMKYAIRKLDDTEFRNPWARAFIRVRKYEDSPSRSRSRSRSRSPKRIRSKLDRSVSRSPSRSRSASPIKPSRPRSQSRSRSPSRSRSVSPRQVRSGSD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01032 257 Gene3D - 2 110 IPR012677 -
Bach12g01032 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 111 189 IPR000504 GO:0003723
Bach12g01032 257 FunFam serine/arginine-rich splicing factor SR34A-like 2 110 - -
Bach12g01032 257 MobiDBLite consensus disorder prediction 217 257 - -
Bach12g01032 257 MobiDBLite consensus disorder prediction 188 257 - -
Bach12g01032 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 82 IPR000504 GO:0003723
Bach12g01032 257 Gene3D - 111 188 IPR012677 -
Bach12g01032 257 SMART rrm1_1 8 78 IPR000504 GO:0003723
Bach12g01032 257 SMART rrm1_1 112 181 IPR000504 GO:0003723
Bach12g01032 257 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 76 IPR000504 GO:0003723
Bach12g01032 257 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 113 175 IPR000504 GO:0003723
Bach12g01032 257 MobiDBLite consensus disorder prediction 81 101 - -
Bach12g01032 257 PANTHER RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN 7 246 - -
Bach12g01032 257 FunFam serine/arginine-rich splicing factor SR34A-like 111 188 - -
Bach12g01032 257 SUPERFAMILY RNA-binding domain, RBD 6 180 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01032 Bach-Chr12 7270111 7274379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01032 4 195 Eukaryotic Initiation Factors Gene Family AT4G34110 24.876 1.29e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01032 K12890 - gmx:100786491 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01032 12 7270111 7274379 Bach12g01032 12 7270111 7274379 ECH