Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01025 ATGCCCAATGCTGTATATATATATCGGATAGCTCAGTTTTCATTCATTAACCAAAATCATCTGATATTTGCCACTTTCAATTGTTACTCGTACATGAACAAAATGTACGCTCTTCTTATATTGCTAATCTTATCCTCCCATAATCATCTCCAAGTGGAAGGCACTGAAACTGAAAGTGAGAGAGATGCCCTGCTTTCTTTCAAATCCCAAGTGAGTGACCCCAATAACAGTCTCTCCAACTGGACAGCATCTGCAAATTCCTCTTATTGCACCTGGTATGGGGTTTCATGCTCCACAAATAGAAGGAATGGCACCAGAAGCAGAAGTAATGGCACCAGAAGCAGAAGTAGTGGCAGAGTGAAATCTCTCTGTCTAACCGGACTCAGCCTCTCTGGTAAACTACCCTCTCAACTATCCCACCTCACTCACCTACATTTACTTGACCTTTCCAACAATAACTTTGAGGGTCAAGTTCCCTTGCAATTTGCCCATCTCAAACGCCTTGAAAAAATTTGTTTAGGTGCCAATAATCTTAGTGGTAGACTTCCTGCAGGTTTAGGCCATCTAAAACGTCTCCAATTTATGGACTTGTCTATCAATAATCTCACTGGTGAAGTCCCTAATTCATTTGGAAATCTCTCCTCTCTTAATTACCTATTCTTGGCAAGGAACCAATTTCTTGGTCAAATTCCAATTGAATTGTGTAGCCTTCACAATCTTCGCCATCTTCAACTCTCTGAGAATAATTTCAATGGCCAGTTTCCTACTTGTATTTTCAATATCTCTTCCCTAGAGTTCATATCTGTAACACAGAATAATCTTTCAGGAAGATTACCACAAGATTTGGGTCATGCTCTTCCAAATCTCAAGAATCTCTCTCTGGCTTCAAATAGGTTTCAAGGTGTGATTCCTAGTTCTATATCAAATGCTTCAAAGCTTGAAATTTTCGATCTCTCTAACAATGAATTTCATGGGTTGATTCCTCTATTCACGAACATGAAAAACCTGACCGGACTATTTCTTGGAAATAACCACCTCTCTTCCACCACAGCTTTGAATTATCAGCTGTTTGACTCCCTTAGAAACTCTACGCAGCTCAAAGAGCTTAGGATTTATTCTAATCAGATGGCTGGACAACTTCCAACATCTGTTGCAAATATATCAAGAAATCTGCAGCATTTTTGTGTTGCAGATAACTTTTTGACTGGTAGCATCCCTCAAGGAATAGGAAAGTTTCAAAACCTGATGTCCTTGTCTTTGGAAATGAATGAGTTCACTGGAGAGATACCATTAGAGATAGGTGAGCTATTTCAACTGGTGAATATGGGAATATACTACAATAGTCTGTCTGGGGAAATTCCAGACATGTTTGGCAATTTTACTCAACTGGATACTCTTGAAATGGGATATAACCAGTTCACAGGTAGAATTCCCACTAGTATTGGACAATGTCAGCGATTAAATGTTCTGGACCTTCGAATGAATAAGCTTCATGGGACAACACCAAACGAGATTTTCAGGCTTTCTGGCTTGATCGAATTGTACCTGGCGGGGAATGACGCTCTCACTGGTTCGCTTCCTTCTCAAGTCAGCTCCATGAAGCAACTTCAGATCTTGGACATCTCAGATAATCAATTCTCAGGGAAAATTCCTAAGGAAATAGGTGAGTGTTCAAGTCTCAAGTCGCTCATATTGGCAAGAAACAACTTCATTGGCTCAATCCCAAATTCTGTGGGTGTTTTATTATCGTTGGAGACGTTGGATTTATCTTCAAACAATCTCTCTGGCCCAATTCCTCTAAGTTTAGAAAAGCCCCAGTACTTGGTGAGCTTAAACTTGTCTTTCAACCATTTGGAAGGTCTAGTTCCTGTGGAAGGTGTTTTTATGAACTTTAGTGGGGTTGCACTCCAAGGAAACAACAACCTCTGCAGCATGGATAAGAAAATTGCACACATGTTGGGAATCTTTCTCTGTCCTGCCGGTAAAAAGAAGAGAGCATTCTTACTCCCTACCATACTTACACTTGCAGGTGGTGCTGCTTTCTTCATTCTGATGCTCTGCATATTGTGGGTGATGAGGTCAAGAAAAAATAAAAACAAGCAGGAGAAAACTAGTTTATCATCTGCTCTTCTCAAGGGGTTGTCTCCAAATATATCCTACGATGATATTCGGGTTGCTACCAACAATTTTGCAGTAGAAAACCTGGTAGGAAAAGGAGGCTTTGGCAATGTTTATAAGGGCATGTTTAACTTCAGCACAGGGGATATAATCTCCCTTGCTGTGAAAGTTCTAGACTTGCAAAAAAGCAAAGCCTCTCGGAGTTTCAATGCAGAATGTGAAGCTTTGAGAAATGTTCGGCATCGGAACCTTGTGAAGGTTATCAGTTGCTGCTCCAGCGTTGATCATAGAGGAGATGAATTCAAAGCCCTGGTTATGCAATTCATGAGCTATGGCAATCTAGACATGTGGCTGCACCCAGAAGATGAAGAATCAAGGTCCTTCTTGTCTTTACATCAAAGATTGAATGTTGCAGTAGATGTTGCTTCAGCCATGGACTATTTGCACCATGATTGTGACCCACCACTAGTTCACTGCGATTTGAAACCTGGCAACGTCCTACTAGATGAAAATATGGTTGCACATATTGGAGATTTTGGATTGGCAAGGATTCTTTCTCAAATTCCATCACAGAATGAAAGTAGCACGCTGGGACTGAAAGGTTCAATTGGCTATGTTGCCCCAGAATATGGTCTGGGTGGCAAAGCTTCAACCAGTGGAGATGTCTACAGTTTCGGGATACTGCTACTGGAGATGTTCACAGCAAAAAGGCCAACTGATGAGATGTTCAAAGAAGGTTTAGACCTAAACAAATTTGCTTCAGGTGTAGATGAGAATCAAGTGTTGCATGTTGCTGATCCAAGGCTTTTTAATTGTGAGTATTCATCACAAAGCTCAAGCACTACTTATTATAGTGATGGCAACAGTAGTGAGAACGGAAGTTTGCAAATGAAAGCTGAGGAGTGTATAGCTTCTGTCATAAGGATTGGCTTATCCTGTGCGGCTCCTCTGGCCAAAGATCGTTTAACCATGAGGGTGGCATTAACAAAATTGCAAAGAATTAGACAGTCTGTGCAGATAATGTGA 3144 0.4084 MPNAVYIYRIAQFSFINQNHLIFATFNCYSYMNKMYALLILLILSSHNHLQVEGTETESERDALLSFKSQVSDPNNSLSNWTASANSSYCTWYGVSCSTNRRNGTRSRSNGTRSRSSGRVKSLCLTGLSLSGKLPSQLSHLTHLHLLDLSNNNFEGQVPLQFAHLKRLEKICLGANNLSGRLPAGLGHLKRLQFMDLSINNLTGEVPNSFGNLSSLNYLFLARNQFLGQIPIELCSLHNLRHLQLSENNFNGQFPTCIFNISSLEFISVTQNNLSGRLPQDLGHALPNLKNLSLASNRFQGVIPSSISNASKLEIFDLSNNEFHGLIPLFTNMKNLTGLFLGNNHLSSTTALNYQLFDSLRNSTQLKELRIYSNQMAGQLPTSVANISRNLQHFCVADNFLTGSIPQGIGKFQNLMSLSLEMNEFTGEIPLEIGELFQLVNMGIYYNSLSGEIPDMFGNFTQLDTLEMGYNQFTGRIPTSIGQCQRLNVLDLRMNKLHGTTPNEIFRLSGLIELYLAGNDALTGSLPSQVSSMKQLQILDISDNQFSGKIPKEIGECSSLKSLILARNNFIGSIPNSVGVLLSLETLDLSSNNLSGPIPLSLEKPQYLVSLNLSFNHLEGLVPVEGVFMNFSGVALQGNNNLCSMDKKIAHMLGIFLCPAGKKKRAFLLPTILTLAGGAAFFILMLCILWVMRSRKNKNKQEKTSLSSALLKGLSPNISYDDIRVATNNFAVENLVGKGGFGNVYKGMFNFSTGDIISLAVKVLDLQKSKASRSFNAECEALRNVRHRNLVKVISCCSSVDHRGDEFKALVMQFMSYGNLDMWLHPEDEESRSFLSLHQRLNVAVDVASAMDYLHHDCDPPLVHCDLKPGNVLLDENMVAHIGDFGLARILSQIPSQNESSTLGLKGSIGYVAPEYGLGGKASTSGDVYSFGILLLEMFTAKRPTDEMFKEGLDLNKFASGVDENQVLHVADPRLFNCEYSSQSSSTTYYSDGNSSENGSLQMKAEECIASVIRIGLSCAAPLAKDRLTMRVALTKLQRIRQSVQIM 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01025 1047 SUPERFAMILY L domain-like 389 646 - -
Bach12g01025 1047 FunFam LRR receptor-like serine/threonine-protein kinase EFR 700 814 - -
Bach12g01025 1047 Gene3D Ribonuclease Inhibitor 231 330 IPR032675 -
Bach12g01025 1047 Gene3D Transferase(Phosphotransferase) domain 1 815 1046 - -
Bach12g01025 1047 PANTHER RECEPTOR-LIKE PROTEIN 55 357 1042 - -
Bach12g01025 1047 SMART LRR_typ_2 286 309 IPR003591 -
Bach12g01025 1047 SMART LRR_typ_2 189 212 IPR003591 -
Bach12g01025 1047 SMART LRR_typ_2 237 261 IPR003591 -
Bach12g01025 1047 SMART LRR_typ_2 581 605 IPR003591 -
Bach12g01025 1047 SMART LRR_typ_2 533 557 IPR003591 -
Bach12g01025 1047 SMART LRR_typ_2 141 164 IPR003591 -
Bach12g01025 1047 SMART LRR_typ_2 333 359 IPR003591 -
Bach12g01025 1047 ProSitePatterns Protein kinases ATP-binding region signature. 736 762 IPR017441 GO:0005524
Bach12g01025 1047 Gene3D Phosphorylase Kinase; domain 1 690 814 - -
Bach12g01025 1047 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Bach12g01025 1047 SUPERFAMILY L domain-like 57 349 - -
Bach12g01025 1047 SUPERFAMILY Protein kinase-like (PK-like) 708 1037 IPR011009 -
Bach12g01025 1047 Gene3D Ribonuclease Inhibitor 331 650 IPR032675 -
Bach12g01025 1047 ProSiteProfiles Leucine-rich repeat profile. 583 604 IPR001611 GO:0005515
Bach12g01025 1047 Pfam Protein tyrosine and serine/threonine kinase 733 950 IPR001245 GO:0004672|GO:0006468
Bach12g01025 1047 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 98 353 - -
Bach12g01025 1047 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Bach12g01025 1047 Pfam Leucine rich repeat N-terminal domain 58 98 IPR013210 -
Bach12g01025 1047 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 815 1047 - -
Bach12g01025 1047 SMART serkin_6 730 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01025 1047 ProSiteProfiles Protein kinase domain profile. 730 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g01025 1047 FunFam LRR receptor-like serine/threonine-protein kinase EFR 354 663 - -
Bach12g01025 1047 Gene3D Ribonuclease Inhibitor 56 230 IPR032675 -
Bach12g01025 1047 Pfam Leucine Rich Repeat 583 604 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01025 Bach-Chr12 7228510 7231800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01025 50 1042 Receptor kinase-like Gene Family AT3G47570 39.765 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach12g01025 PK_Tyr_Ser-Thr 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01025 - - gmx:100776054 1195.65