Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01017 TTTCTGGCTAGCTATATATTCTTCAATAGATTCCCTTGAGCAGACTTTCATAGCACAATTTAACAACAATATACAAACTCACCCTTATGAAATACTCTTCTCTCTCACTGCTCACAAACCAAAAGATGGAGGGTGATGAGTATATTCAAGGATCAAAAGAGGAAAACAGTGACAGCATCACCAGTTCAAAGCTACCTCAAAATCCAACGAAGAAAAAGAGCAAGATAGTGAACAAGAGGAGGTTTAGTGATGAACAGATTAGATCACTTGAATGCATATTTGAGTCAGAATCAAAACTGGAGCCAAGGAAGAAGATGCAACTAGCAAGAGATCTTGGGCTGCAACCACGCCAAGTTGCCATATGGTTTCAGAATAGAAGAGCCAGATGGAAATCAAAACGGATAGAGCAAGAATACAGGAAACTCAAAGATGAACATGACAATCTAGCATCTCGATTTGAGTGTTTAAAGAAAGAGAAGGAGTCCTTGCAAATAGAGTTTCAGAAGCTAAGTGATATAATGGAGAAATCTGTTGATGCGCAAAGGGAAGGAACAATCAAGGTAGCCAAAGATAATAGCAAAGAGGATGGTGGCTCAGGCAGTGGACACAGCAATTGGAGAGGTGATGAAGCAAAGCCAGGTTATTCAAATGAGGGTTTTGAGGACAGAGAAGCCATGCATTTACATGATGAAAATGAAAATGCGGACGGAGAACAACAAATTCAGAAAATGGAGAAGCATGAGGATGAGAATGTTGAGGTTCCCTTGGCATCGCTGGAAAAATGGTATAGTGTGGATCCTAGTGGTCTCCTTGATCAATCTTGCAGCAGTTCACAGTGGTTAGATTTATGGACTTGAATGTTTGCTTGTTTGGTTGAAGAAGGAAGAAGGACTGGAACTGGATGGCTCTGTCCTTATGGCACCAGCATTCCAAGAAACCCAAGCCCAAGCAGGAATTGAAGTGGAAATTTAGTGTCGGATTGGTCAAGAAAATCAGAGTTGAAATTTTTGTAGGCTGTGCGATGATTTTAAATTGCAGAAATGAAGACAGTCTCACTCACTGGATTGTTTATAGATTTGGAAGAAGAAAGAATATGCCATGTTTCTGCTTGCATGCCTTTCCAATCTCTCTGATTTTTTCCCTTATGCTATTCAAAAATTATTTAGTAAGATTATAATGTGTTGATCGACTTGAATTCTAC 1201 0.3955 MKYSSLSLLTNQKMEGDEYIQGSKEENSDSITSSKLPQNPTKKKSKIVNKRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEHDNLASRFECLKKEKESLQIEFQKLSDIMEKSVDAQREGTIKVAKDNSKEDGGSGSGHSNWRGDEAKPGYSNEGFEDREAMHLHDENENADGEQQIQKMEKHEDENVEVPLASLEKWYSVDPSGLLDQSCSSSQWLDLWT 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01017 256 MobiDBLite consensus disorder prediction 185 223 - -
Bach12g01017 256 MobiDBLite consensus disorder prediction 1 17 - -
Bach12g01017 256 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
Bach12g01017 256 SMART HOX_1 46 108 IPR001356 GO:0003677
Bach12g01017 256 MobiDBLite consensus disorder prediction 25 43 - -
Bach12g01017 256 CDD homeodomain 50 105 IPR001356 GO:0003677
Bach12g01017 256 PRINTS Lambda-repressor HTH signature 84 100 IPR000047 GO:0003677
Bach12g01017 256 PRINTS Lambda-repressor HTH signature 75 84 IPR000047 GO:0003677
Bach12g01017 256 FunFam Homeobox-leucine zipper protein ATHB-7 29 104 - -
Bach12g01017 256 Gene3D - 48 109 - -
Bach12g01017 256 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 37 204 IPR045224 GO:0003700
Bach12g01017 256 MobiDBLite consensus disorder prediction 157 223 - -
Bach12g01017 256 Coils Coil 96 144 - -
Bach12g01017 256 MobiDBLite consensus disorder prediction 1 48 - -
Bach12g01017 256 ProSitePatterns 'Homeobox' domain signature. 79 102 IPR017970 GO:0000981|GO:0006355
Bach12g01017 256 Pfam Homeobox associated leucine zipper 104 145 IPR003106 GO:0006355|GO:0043565
Bach12g01017 256 Pfam Homeodomain 50 102 IPR001356 GO:0003677
Bach12g01017 256 SUPERFAMILY Homeodomain-like 31 104 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01017 Bach-Chr12 7179651 7180945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g01017 49 256 Homeobox Transcription Factor Family AT2G46680 40.000 2.25e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach12g01017 Homeodomain 2.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01017 K09338 - gmx:100499926 317.39