Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00989 ATGGCCTTGTCAAGCCCGCGGATACAAAGATTTCTCTTAACTAAGCTCCATGGCCACTCCACCTCCAAGATCATTCACAGAAGCAGCTTTGCCACTACAAGCAGAAGCCAATCCTGCTCTGCCATAGCAATTGACGCCCCTTCATCTTTGACCGATGTAGCAGGTATAAGATGGGGGTCCATAGCTTTGCAGGGTCTCCGGGAAGAGATGGAAGATGATGTTATTGTTCGACCTAGCCTTGATGGGTTCTCTTTTGCAGCTGTATTTGATGGTCATGGAGGATTCTCTTCGGTTGAGTTCCTCAGGGATGAGCTCTACAAGGAATGTCTTGCGGCTTTACAAGGTGGGTTACTGTTGGGTGGAAAAGATTTGAAAGCCATTAAAGAAGCATTACAGCGGGCATTTGAAGAACTTGACACGAAATTGTTAAACTGGCTTGATATGAATGGAAAAGTGGACGAATCTGGTGCTACCGCAACTGCAATATTCATTGGAGAAGATAAGCTGCTTGTTTCACATGTTGGTGACTCGTCCGTGGTTCTGTGCAGATCTGGAAAAGCAGAAGTTCTGACCTGTCCTCACCGACCATATGGGAGCAACAAATCCTCTCTTCAAGAAATTAGAAGAATTAGAGAAGCAGGTGGATGGATTGTCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGGGCATTTGGGGACTTGCGATTCAAAACCAAGAAGAATGAGATGCTGAGGAAAGGGGTTGAGGAAGGAAGATGGTCAGAAAAATTTATTTCTCGTGTACAGCTCAACAGTGACTTGGTCATTGCATGGCCTGATATCTATCAAGCAGCTCTTGGCTCAGACGCAGAGTTCGTAGTATTAGCATCTGATGGCTTATGGGACTATATAAGCAGCTCAGAGGCAGTTTCTTTTGTGAGGGATCAACTTCGACAGCATGGTGATATTCAGCTAGCTTGTGAAGCACTTGCACAAGCAGCTCTGGACCGACGCGCACAGGATAATGTCACCGTTGTAATTGCTGATTTAGGGAAGACAGATTGGCAGACTTTGCCAGTGCAGCAACAGAATGTTATATATGAGCTGGTTCAAGCTTTTGCGACCATTGTTATTGTGTCGCTTGGGATTTGGTTTTCATCTCAGTTCTCTTTATGA 1158 0.4516 MALSSPRIQRFLLTKLHGHSTSKIIHRSSFATTSRSQSCSAIAIDAPSSLTDVAGIRWGSIALQGLREEMEDDVIVRPSLDGFSFAAVFDGHGGFSSVEFLRDELYKECLAALQGGLLLGGKDLKAIKEALQRAFEELDTKLLNWLDMNGKVDESGATATAIFIGEDKLLVSHVGDSSVVLCRSGKAEVLTCPHRPYGSNKSSLQEIRRIREAGGWIVNGRICGDIAVSRAFGDLRFKTKKNEMLRKGVEEGRWSEKFISRVQLNSDLVIAWPDIYQAALGSDAEFVVLASDGLWDYISSSEAVSFVRDQLRQHGDIQLACEALAQAALDRRAQDNVTVVIADLGKTDWQTLPVQQQNVIYELVQAFATIVIVSLGIWFSSQFSL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00989 385 PANTHER PROTEIN PHOSPHATASE 2C 40 342 IPR015655 GO:0004722|GO:0006470
Bach12g00989 385 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Bach12g00989 385 SMART PP2C_4 47 342 IPR001932 -
Bach12g00989 385 Pfam Protein phosphatase 2C 59 337 IPR001932 -
Bach12g00989 385 FunFam Protein phosphatase 2C 57 56 351 - -
Bach12g00989 385 SUPERFAMILY PP2C-like 54 345 IPR036457 -
Bach12g00989 385 ProSiteProfiles PPM-type phosphatase domain profile. 57 344 IPR001932 -
Bach12g00989 385 CDD PP2Cc 56 344 IPR001932 -
Bach12g00989 385 Gene3D - 56 350 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00989 Bach-Chr12 7021775 7025168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00989 1 321 PP2C-type Phosphatase Gene Family AT4G27800 59.633 2.45e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00989 K04457 - vra:106776113 587.03