Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00972 ATGAATTACGGCAGGCTCGGACCCTCTGACCCGGGTGGATCCTCCCGGCGATCCACCCTGTCAGAGGTTGCCACACCTCCCAAAAAGAACTGCAATAGGGCTATCATTTTGTCAGTTATTGCCGTTGGTTTAATTGTTGCCTCCGCTGTGTCTGCAGCGGTAGTGATCACCAGCCGGACCCGTGGGTCGGGTCGAAATGGTCCAGGCATCCGGCAGCCCACACAAAGTATTTCTCGGGCCTGCAGCAAAACCAGGTTCCCATCACTATGCATCAACTCACTCCTTGACTTCCCGGGTTCAACTACGGCCACAGAGCAGGACCTCGTCCACATTTCCTTTAACATGACTCTCCAGCACTTCAGTAAAGCTCTCTACTCCTCCACCGGGATCCCCTACGCCCAGATGGATCAACGCGTACGGTCGGCGTACGATGACTGCCTTGAGCTCCTGGAGGACTCCGTGGACGCCCTCGCGAGCTCCCTCACCTCAGTCGCTCCATCGGACGGCGGGGGCAATCCCAGGGGCTCCACGCAGGACGTGCTCACCTGGCTCAGTGCCGCCCTCACGAATCAAGACACGTGTACCGAGGGGCTCTCGGACATAAGCGGGAGCATCAAGGATGAGATGGCCAATAATTTGAGGGACTTGTCTGAACTCGTGAGCAACTGCCTCGCGATTTTCTCGGCGAGTGGCGGGGACGACTTTGCCGGAGTTCCCATCCATAACAGAAGAAGGCTAATGGGAGAGAATGCCGATATCTCGAGTAATTTCCCGAAATGGTTAGGTAGAAGAGACAGGAAATTGCTGAGTTTACCGATATCGGCGATACAAGCCGACATAATTGTATCCAAGAACGGGAATGGAACGGTGAAGACTATCGCAGAGGCTATTAAGAAGGCACCAGAGCACAGTAACCGCCGGATCATTATCTACGTGAAGGCAGGAAGGTACGAAGAGAATAATTTAAAGGTGGGGCGAAAGAAAATCAACCTCATGTTCATTGGTGACGGGAAGGGTAAGACAGTAATTACTGGCCGGAAAAATGTTCAGGATGGGCTCACGACTTTCCACACGGCTTCCTTCGCTTCAACTGGCGCTGGCTTCATTGCTCGGGACATCACGTTCGAGAACTACGCCGGGCCGGAGAAACACCAAGCGGTGGCCCTCCGTGTCGGAGCTGATCATGCGGTGGTGTACCGCTGCGACATCATCGGATACCAAGACTCGTGCTATGTCCACTCCAATCGACAGTTCTTCCGTGAGTGTAACATTTATGGAACCGTAGATTTCATATTTGGTAATGCCGCTGTAGTTTTCCAAAATTGTAGCCTTTATGCCCGAAAGCCAATGTCCATGCAAAAGAACACCATTACAGCCCAAAACAGGAAAGACCCGAATCAGAACACGGGTATATCCATCCACAATTGCCGGATCCTTGCTGACCCTGATCTTCAGAAATCAAAAGGAAGCTTCCAAACATATCTTGGCCGTCCATGGAAACTATACTCCAGAACCGTGTACATGATATCATACTTGGGTGATCACATACATCCACGTGGATGGCTGGAGTGGAATTCAACATTCGCCTTAGATACACTCTACTATGGTGAGTATATGAATTACGGGCCGGGTGCAGCCGTTGGACAACGGGTCAAATGGCCGGGTTATCGGGTCATCACGTCCACGTCGGAGGCAAGCAGATTCACGGTGGGTTCATTCATATCAGGCTCCGCATGGTTGCCGTCAACCGGAGTGGCATTTTTGGCCGGCTTATCGACCTGA 1782 0.5241 MNYGRLGPSDPGGSSRRSTLSEVATPPKKNCNRAIILSVIAVGLIVASAVSAAVVITSRTRGSGRNGPGIRQPTQSISRACSKTRFPSLCINSLLDFPGSTTATEQDLVHISFNMTLQHFSKALYSSTGIPYAQMDQRVRSAYDDCLELLEDSVDALASSLTSVAPSDGGGNPRGSTQDVLTWLSAALTNQDTCTEGLSDISGSIKDEMANNLRDLSELVSNCLAIFSASGGDDFAGVPIHNRRRLMGENADISSNFPKWLGRRDRKLLSLPISAIQADIIVSKNGNGTVKTIAEAIKKAPEHSNRRIIIYVKAGRYEENNLKVGRKKINLMFIGDGKGKTVITGRKNVQDGLTTFHTASFASTGAGFIARDITFENYAGPEKHQAVALRVGADHAVVYRCDIIGYQDSCYVHSNRQFFRECNIYGTVDFIFGNAAVVFQNCSLYARKPMSMQKNTITAQNRKDPNQNTGISIHNCRILADPDLQKSKGSFQTYLGRPWKLYSRTVYMISYLGDHIHPRGWLEWNSTFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTSEASRFTVGSFISGSAWLPSTGVAFLAGLST 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00972 593 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Bach12g00972 593 NCBIfam pectinesterase inhibitor domain 70 227 IPR006501 GO:0004857
Bach12g00972 593 Pfam Plant invertase/pectin methylesterase inhibitor 76 226 IPR006501 GO:0004857
Bach12g00972 593 Pfam Pectinesterase 279 576 IPR000070 GO:0030599|GO:0042545
Bach12g00972 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 229 IPR035513 -
Bach12g00972 593 SMART PMEI_2 72 226 IPR006501 GO:0004857
Bach12g00972 593 Gene3D - 273 591 IPR012334 -
Bach12g00972 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 228 IPR035513 -
Bach12g00972 593 PANTHER PECTINESTERASE 47 581 - -
Bach12g00972 593 CDD PMEI-like_3 80 229 - -
Bach12g00972 593 FunFam Pectinesterase 273 591 - -
Bach12g00972 593 FunFam Pectinesterase 73 230 - -
Bach12g00972 593 MobiDBLite consensus disorder prediction 1 25 - -
Bach12g00972 593 SUPERFAMILY Pectin lyase-like 274 590 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00972 Bach-Chr12 6920648 6923776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00972 1 592 Carbohydrate Esterase AT5G53370 65.719 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00972 - - zju:107414790 906.36