Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00966 ATGCCGAGTCTGAAACGTTGCAAACTTGGTGACTCGGTTGGGGATGACGATGACACTTCTGCAGCTCGGAAGAAGAGGAGGACAAACGGGTATTACCCCTTGAATCTTCTCGGCGATGTCGCTGCTGGTCTAATTCCTGTGAGCTTTCATGGTTTGCTGAGTGCTGGTGTATCTGAGAAGGGCTTTTCTGCGTCGTGGTGCACCGAAGTCTCGTGCTCCCCAGGTGAAGTGGAGTCAAAGTCCAAAGGTGAGAACTCTGTCAGAGCAAAGATAAATCGCCCTGTAGAGGTTTCACGGCCACCGCTCGTGAGGACGTCGAGAGGTAGAGTTCAGGCACTCCCTTCACGTTTTAACGACTCAGTTATCGAGAATTGGAAGAAAGAGACTAAGACTAGCGTGCGTGACTATAGTTTTGATGAGGATTTTGAATGTAAAAAGGAGAAATTTAGTTTTAAGACACCGAAAGCGTACAATCAGAATTCAAAGAAAGGGAGAGACGATGATAAAATTGGGTGCAAGTCTCGCAAATACCCGACATTGTGTGAAGAGGGGCCAAGAGATGATGGGCGTGTACGGTATAAGAATTTTGAGATTAGGAAGTATTCATCTCCACGCACTACATTTGCCTCAATGCGTGAGCAATCAGTTGAAGATGAGAAAGGCCGAGTTGGTGATATAGAGGAAGTTGATTTAACCGGCAGCAACAGATTTTCGAAGAAGAATGACAAGAAGAAAGACGGACTATATGGACCCGAAGACTTCTATGCAGGTGATATAGTGTGGGCCAAAGCAGGGAAGAGGGAGCCCTTTTGGCCAGCCATTGTCATTGATCCAATGTCTCAGGCACCTGAGCTGGTTCTGAGGTCTTGTATAGCAGATGCAGCTTGTGTGATGTTTCTTGGGTACTCAGGGAATGAAAATCAAAGGGACTTTGCGTGGGTGAAGCATGGGATGATTTTTCCATTTATAGATTATGTAGACAGGTTTCAGGGGCAGACTGAATTGAGTTACTATAACTCCTGTGATTTCCAAATGGCTATAGAGGAGGCATTTTTGGCAGATCATGGATTTACTGAGAAGTTGATTGCAGATATAAATACAGCAGCTGGTAACACAGGTTATGATGAAACTATTTTAAAAAGCTTCCTGGAGGCCCCTGGTGCAAACCAAGATGCAGGTTACCACTTTCTGAATCAGGATCTATTTGATAGGAAGAAAGACATGCGACCTTGTGAAGCCTGTGGAATGGACCTTCCTTTCAAAATGTCGAAGAAAATGAAGGACTCAGCTCCTGGTGGCCAATTCCTATGTAAAACATGTGCCAGGTTAACGAAATCAAAACATTATTGTGGCATATGCAAGAAAATTTGGAATCATTCAGATAGTGGGAGCTGGGTACGATGTGATGGATGTAAGGTATGGGTGCATGCAGAATGCGACAAAATTTCCAGTAACCTTTTTAAGAATCTTGGAGGCACTGATTATTACTGCCCTACTTGCAAAGCGAAGTTTGATTTTGAATTATCTGATTCAGAAAAGTCACAACCAAAAGTCAAAGTTGTGTGCAAATGTGGATTTTGTGGGACAGAAAAGCAAGCACTTAGTGAATGGGAACGACACACTGGTTCCAAATCAAGAAATTGGAGAACAAGTATTAGGGTGAAAGGCTCCATGTTGCCGCTGGAACAATGGATGCTGCAGTTGGCAGAGTTCCATGCCAGTGCCCTCGTTTCTGTCAAACCTAAAAAGCCTTCTTTAAAAGAAAGGAAGCAGAAGTTGCTAACATTTTTGCAAGAGAAGTATGAACCTGTTTATGCAAAGTGGACAACAGAACGGTGTGCTGTATGTAGATGGGTTGAAGATTGGGACTACAACAAAATTATCATTTGCAATAGATGCCAAATAGCTGTTCATCAAGAGTGCTACGGTGCAAGAAATGTTCGGGATTTTACATCATGGGTTTGTAAAACTTGTGAAACACCTGACATCAAGCGTGAGTGTTGTCTTTGTCCTGTAAAAGGTGGAGCTCTAAAGCCAACTGATGTTGACACATTATGGGTTCATGTCACTTGTGCTTGGTTTCGACCTGAAGTCTCTTTTGCTAGTGATGAAAAGATGGAGCCAGCTCTGGGTATTCTGAGTATTCCGTCAAATTCTTTTGTGAAGATTTGTGTAATTTGTAAGCAAATTCATGGCTCTTGTACACAATGTTGCAAGTGTTCTACTTATTTCCATGCCATGTGTGCATCAAGGTCAGGGTATCGAATGGAGCTGCATTGCACTGAAAAAAATGGCAGACAGACAACAAAAATGGTTTCTTACTGTGCTTACCACAGGGCTCCAAATCCAGATACTGTTTTGATCATACAAACCCCTCTTGGGATTATTTCAGCCAAAAGCCTTCTTCAAAATAAGAAAAAAACTGGATCAAGGTTAATTTCATCTAATAGAACAAAGCTAGAAGATACTCCTCCTGTAGATAACACTGGGGAAGAGCCATTCTCTGCCGCTAGGTGCCGCATCTTTCAAAGAACGAATCCTAGCAAAAAGAGAGCAGCTGATGAAGCCGTGGCTCATCGAGTGAAGGGTCACTGCCATCATCCTTTAGATGCAATACAGAGTTTAAATGCTTACAGAGTGGTAGAGGAACAGCCTCTGACGTTTTCTTCTTTTAGGGAACGTCTTTACCACTTACAGAGAACCGAAAATGAGCGGGTTTGCTTTGGGAGTTCAGGTATACATGGATGGGGGCTTTTTGCACGCAGGAATATTCAAGAAGGAGAAATGGTTCTTGAATATCGTGGGGAACAAGTGAGACGCAGCATCGCCGATCTTAGGGAGGCACGGTACAGATTAGAAGGCAAAGACTGCTATCTGTTTAAGATAAGTGAAGAAGTGGTAGTAGATGCCACCGATAAAGGAAATATAGCACGGCTAATCAACCATTCTTGTGCTCCGAATTGCTATGCAAGGATCATGAGTGTGGGTGGTGACGAGAGCCGGATTGTACTAATTGCTAAGACTAACGTACCCGCTGGTGATGAACTAACGTATGACTACTTGTTTGATCCAGATGAGCCTGATGAATTCAAGGTTCCTTGTTTATGTAAAGCTCCAACTTGCCGGAAATTCATGAATTGAAGATTTATACAGATGACACCCTATTGTTTCTCCGCAAGGAGCACTAACCCATCCCCTCGCCGGCGGGGATCTCACAGTTACACCAAACTTGTACTTTTAATCTCAAAAGAAGAAAAAAGTAAAGTAGGAACGGAGAAAGAAAGCCATAATTTTGTGTTTTTCTCTTCAACTTCAGTGTTGTTTTGCTTTAGACAGATTGACTTTCGTAGAAGCCGAAGCCTAATAAAAAGGCTTATAGATTTGGCGGCTTTTGGCTCGTAGCATCTCTGTAAATGTTTCTGCGAATATTTATTTATTTTCTTAATTG 3448 0.4278 MPSLKRCKLGDSVGDDDDTSAARKKRRTNGYYPLNLLGDVAAGLIPVSFHGLLSAGVSEKGFSASWCTEVSCSPGEVESKSKGENSVRAKINRPVEVSRPPLVRTSRGRVQALPSRFNDSVIENWKKETKTSVRDYSFDEDFECKKEKFSFKTPKAYNQNSKKGRDDDKIGCKSRKYPTLCEEGPRDDGRVRYKNFEIRKYSSPRTTFASMREQSVEDEKGRVGDIEEVDLTGSNRFSKKNDKKKDGLYGPEDFYAGDIVWAKAGKREPFWPAIVIDPMSQAPELVLRSCIADAACVMFLGYSGNENQRDFAWVKHGMIFPFIDYVDRFQGQTELSYYNSCDFQMAIEEAFLADHGFTEKLIADINTAAGNTGYDETILKSFLEAPGANQDAGYHFLNQDLFDRKKDMRPCEACGMDLPFKMSKKMKDSAPGGQFLCKTCARLTKSKHYCGICKKIWNHSDSGSWVRCDGCKVWVHAECDKISSNLFKNLGGTDYYCPTCKAKFDFELSDSEKSQPKVKVVCKCGFCGTEKQALSEWERHTGSKSRNWRTSIRVKGSMLPLEQWMLQLAEFHASALVSVKPKKPSLKERKQKLLTFLQEKYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVRDFTSWVCKTCETPDIKRECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRSGYRMELHCTEKNGRQTTKMVSYCAYHRAPNPDTVLIIQTPLGIISAKSLLQNKKKTGSRLISSNRTKLEDTPPVDNTGEEPFSAARCRIFQRTNPSKKRAADEAVAHRVKGHCHHPLDAIQSLNAYRVVEEQPLTFSSFRERLYHLQRTENERVCFGSSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLREARYRLEGKDCYLFKISEEVVVDATDKGNIARLINHSCAPNCYARIMSVGGDESRIVLIAKTNVPAGDELTYDYLFDPDEPDEFKVPCLCKAPTCRKFMN 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00966 1046 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 1046 IPR025780 -
Bach12g00966 1046 CDD SET_SETD1-like 891 1042 - -
Bach12g00966 1046 Gene3D - 251 355 - -
Bach12g00966 1046 ProSiteProfiles Post-SET domain profile. 1030 1046 IPR003616 -
Bach12g00966 1046 SUPERFAMILY FYVE/PHD zinc finger 448 504 IPR011011 -
Bach12g00966 1046 Pfam PHD-zinc-finger like domain 666 778 - -
Bach12g00966 1046 FunFam Histone-lysine N-methyltransferase 600 661 - -
Bach12g00966 1046 CDD PWWP_AtATX3-like 255 359 - -
Bach12g00966 1046 SUPERFAMILY FYVE/PHD zinc finger 611 675 IPR011011 -
Bach12g00966 1046 ProSiteProfiles Zinc finger PHD-type profile. 447 503 IPR019787 -
Bach12g00966 1046 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 443 505 IPR013083 -
Bach12g00966 1046 ProSiteProfiles PWWP domain profile. 256 325 IPR000313 -
Bach12g00966 1046 FunFam Histone-lysine N-methyltransferase 878 1046 - -
Bach12g00966 1046 ProSiteProfiles Extended PHD (ePHD) domain profile. 664 779 IPR034732 -
Bach12g00966 1046 FunFam Histone-lysine N-methyltransferase 662 781 - -
Bach12g00966 1046 Pfam PHD-finger 449 502 IPR019787 -
Bach12g00966 1046 SUPERFAMILY Tudor/PWWP/MBT 249 353 - -
Bach12g00966 1046 CDD ePHD_ATX3_4_5_like 667 778 IPR041955 -
Bach12g00966 1046 ProSiteProfiles Zinc finger PHD-type profile. 610 661 IPR019787 -
Bach12g00966 1046 Gene3D SET domain 802 1046 IPR046341 -
Bach12g00966 1046 SMART PHD_3 723 779 IPR001965 -
Bach12g00966 1046 SMART PHD_3 449 501 IPR001965 -
Bach12g00966 1046 SMART PHD_3 612 659 IPR001965 -
Bach12g00966 1046 Pfam PHD-finger 625 659 - -
Bach12g00966 1046 Pfam PWWP domain 257 350 IPR000313 -
Bach12g00966 1046 PANTHER PHD FINGER PROTEINS 51 521 - -
Bach12g00966 1046 SMART set_7 904 1027 IPR001214 GO:0005515
Bach12g00966 1046 CDD PHD_TCF19_like 450 500 - -
Bach12g00966 1046 ProSitePatterns Zinc finger PHD-type signature. 613 658 IPR019786 -
Bach12g00966 1046 CDD PHD_ATX3_4_5_like 612 658 IPR042011 -
Bach12g00966 1046 SUPERFAMILY SET domain 894 1046 IPR046341 -
Bach12g00966 1046 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 662 781 IPR013083 -
Bach12g00966 1046 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 604 661 IPR013083 -
Bach12g00966 1046 ProSiteProfiles SET domain profile. 904 1021 IPR001214 GO:0005515
Bach12g00966 1046 Pfam SET domain 915 1020 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00966 Bach-Chr12 6864281 6873342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00966 613 778 C2H2 Transcription Factor Family AT3G14740 32.948 8.36e-20 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach12g00966 zf-HC5HC2H_2 5.6e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00966 - - tcc:18605755 1722.98