Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00958 ATGAATTATATGTTTCTTCTCTTGCTCACTTTCAAGATCATCAAGAAGAAGCTGACCAAGATACAAGAGGCAATGGGATTCCAAGCATCACCATCACATACTAGTAAACAGAAAGTGCAACCCGTTTTGAAATTCAAGGAGGAAGCAAGTGATCAAGATGGTCTTGAACGCTCTTTATTTCTTAGAGCACTAAACTCGACTGATAATATTAGCGTTCTTAAAGCCAACCCCTCAAGCTATGAATCATGGGTGGTGAGACACCCATCTGCGTTGCGATATTTTGATAGATTAATGAAAGGAGCCATTGGGAAGAGAATCGTAGTTTTCTTGGACTATGATGGTACCTTGTCACCCATTGTAAATGACCCTGATCGTGCATTTATGTCTGATGAGATGCGTGCAGCGGTGTGTGAAGTTGCCAATTGTTTCCCAACGGCAATTATTAGTGGAAGAAGCAGAGATAAGGTTAAAGGATTTGTGAAGTTAAGTAATGTGTACTACGCCGGTAGCCATGGGATGGATATAATGGCACCAGTGAAGCCAGTTAGATTTTCTAATGGCAAGCATGATAACGCAGCCCTTGACACAATGGACGACGGAGTTCCCTTTCAACCTGCGAAGAAGTTTCTACCTGCAATCAGAGAGATATTAAACATTTTACAGAGCAAAACAAGAGACATACCAGGTGCAAGGGTCGAAGACAACGGCTTCAGTATCTCCGTACATTTCCGGCAGGTCCAAGAAGAGAATTATGGCATATTGGAAGAGAAGGTGAAGTCTGTCCTTGAAAACTATCCAGAATTTTGCTTAAATGAGGGTAAAAAGGTTATGGAAATAAGGCCATCCATAAAATGGAACAAAGGTCATGCCCTAGAATATTTTCTTGACACGCTAGGGTTAAGCAGTTCCAGCAATATCCTTCCTGTGTATATCGGTGATGATCGAACTGATGAAGATGCTTTTAAGGTCATACATAGTAGGGGACAAGGTTACCCAATTATAGTGTCTTCAGTTCCAAGGGATACACGAGCCTTGTATTCTTTGCGTGAACCATCGGAAGTACTAATTTTCTTGTCAAGGCTGGCAAAATGGAGAAAAATCATTTGCTCAAGCAGGCCCTGCAGTTTTGGTTAA 1134 0.4153 MNYMFLLLLTFKIIKKKLTKIQEAMGFQASPSHTSKQKVQPVLKFKEEASDQDGLERSLFLRALNSTDNISVLKANPSSYESWVVRHPSALRYFDRLMKGAIGKRIVVFLDYDGTLSPIVNDPDRAFMSDEMRAAVCEVANCFPTAIISGRSRDKVKGFVKLSNVYYAGSHGMDIMAPVKPVRFSNGKHDNAALDTMDDGVPFQPAKKFLPAIREILNILQSKTRDIPGARVEDNGFSISVHFRQVQEENYGILEEKVKSVLENYPEFCLNEGKKVMEIRPSIKWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIHSRGQGYPIIVSSVPRDTRALYSLREPSEVLIFLSRLAKWRKIICSSRPCSFG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00958 377 Gene3D - 188 282 - -
Bach12g00958 377 Gene3D - 108 348 IPR023214 -
Bach12g00958 377 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 37 367 IPR044651 GO:0004805|GO:0005992
Bach12g00958 377 Pfam Trehalose-phosphatase 109 352 IPR003337 GO:0003824|GO:0005992
Bach12g00958 377 CDD HAD_TPP 107 354 - -
Bach12g00958 377 SUPERFAMILY HAD-like 107 368 IPR036412 -
Bach12g00958 377 FunFam Trehalose 6-phosphate phosphatase 211 369 - -
Bach12g00958 377 NCBIfam HAD-IIB family hydrolase 108 326 IPR006379 -
Bach12g00958 377 NCBIfam trehalose-phosphatase 103 363 IPR003337 GO:0003824|GO:0005992
Bach12g00958 377 FunFam Trehalose 6-phosphate phosphatase 206 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00958 Bach-Chr12 6787569 6790089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00958 108 362 Trehalose Biosynthesis Gene Families AT1G60140 28.889 8.83e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00958 K01087 - gmx:100809194 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00958 12 6787569 6790089 Bach12g00958 12 6787569 6790089 ECH