Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00950 ATGAGTGATACTATATCTGATTTTTTTGAAGACAAAGACTTTGGTGGAGATGATCTCTTTGCCATTTTGGAGAGTCTCGAGGACTTCACTGATTTTCCTCCCATTGATGAAGCTGTTGTTAGCTCAAAGGAGAACGAGGAAACCTCAAGATTGGTGTCTCAGAAATCAACATCTTCCAGTGCTGTCCAAGAATATTCTGAAACCGAGCTTGAAATTTCACCCAAGAACAAGAGACAGAAGCTTGCAGCCACAACTTCGTCTGAGGAACCCAACACAGATGGGCAGCAAAGAATATCTCACATCACTGTGGAGAGAAACAGAAGGAAGCAAATGAACGAGCACTTGTCCGTTTTGAGGACCCTTATGCCTTGCTTTTATGTCAAACGAGGGGACCAAGCTTCAATAATTGGAGGCGTGGTTGACTATATCAATGAGTTGCAGCAAGTTCTACAATCCCTTGAGGCCAAGAAACAAAGGAAAGTTTACAGTGAAGTGCTAAGCCCTAGGCTAGTTTCAAGTCCAAGGCCATTACCGCTAAGTCCTAGAAAACCATCATTGAGCCCTAGAATAAACTTACCCATTAGTCCAAGGACTCCACAACCAGGTAGCCCTTACAGGGCCTGGTTGCAACAACCAGCTGCAGGTTATCTCTCACCCACCATGTGCAACTCTCTCGAACCATCTCCTACATCTTCTGCTTCCTCCATTAATGACAATATCAATGAGCTTGTTGCCAATTCCAAGTCTGCTATTGCAGATGTGGAGGTGAAGTTTTCCGGTCCTCACGTCCTCTTGAAAACTGTATCTCCTCGAATTCCCGGGCAAGCTCTGAAAATCATGTCAACCCTTGAAGACCTAGCACTCGAAATCCTCCATGTGAACATTAGCACTGCTGATGAAACCATGCTAAACTCGTTCACTATTAAGATTGGAATTGAATGCCAACTCAGTGCTGAGGAACTCGCTCAACAAATCCAGCAAACATTCTGCTAA 993 0.4431 MSDTISDFFEDKDFGGDDLFAILESLEDFTDFPPIDEAVVSSKENEETSRLVSQKSTSSSAVQEYSETELEISPKNKRQKLAATTSSEEPNTDGQQRISHITVERNRRKQMNEHLSVLRTLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRLVSSPRPLPLSPRKPSLSPRINLPISPRTPQPGSPYRAWLQQPAAGYLSPTMCNSLEPSPTSSASSINDNINELVANSKSAIADVEVKFSGPHVLLKTVSPRIPGQALKIMSTLEDLALEILHVNISTADETMLNSFTIKIGIECQLSAEELAQQIQQTFC 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00950 330 CDD bHLH_AtFAMA_like 98 169 - -
Bach12g00950 330 MobiDBLite consensus disorder prediction 172 202 - -
Bach12g00950 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 95 146 IPR011598 GO:0046983
Bach12g00950 330 MobiDBLite consensus disorder prediction 78 99 - -
Bach12g00950 330 Gene3D - 86 160 IPR036638 GO:0046983
Bach12g00950 330 PANTHER TRANSCRIPTION FACTOR FAMA 5 329 IPR044283 GO:0003700|GO:0010052
Bach12g00950 330 MobiDBLite consensus disorder prediction 40 106 - -
Bach12g00950 330 FunFam Transcription factor SPEECHLESS 87 161 - -
Bach12g00950 330 Coils Coil 139 159 - -
Bach12g00950 330 Pfam Helix-loop-helix DNA-binding domain 96 147 IPR011598 GO:0046983
Bach12g00950 330 SMART finulus 101 152 IPR011598 GO:0046983
Bach12g00950 330 MobiDBLite consensus disorder prediction 51 69 - -
Bach12g00950 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 94 167 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00950 Bach-Chr12 6728451 6730262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00950 1 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 52.661 1.10e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach12g00950 HLH 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00950 K20558 - rcu:8274388 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00950 12 6728451 6730262 Bach12g00950 12 6728451 6730262 ECH