Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00941 ATGGGTTGGAAACTAGAGCTCTTCTGCTTTTTCTTGGCAGCTGTGGTGACTGAAACTATGTTATTCTCCGTCGCTGCTGAGCCGGTTGAAGATAAACAAGCTTTGCTTGATTTCCTTCACAACATAGGCCACCCTCACTTTCTGAACTGGAACGAGAGTTCTTCTGTGTGCACAAGCTGGAGAGGAGTGACCTGCAACAATGACCAATCCAGGGTCATAGCCCTCCGGTTGCCCGGTGATGGATTGAGCGGTCCCATCCCAACCAACACTCTTAGTCGCCTCACAGAACTTCAGACTCTGAGTCTTAGGTCAAATGGTATCACAGGCCCTTTTCCTTCGGGATTCTCTGAGCTCAAAAATTTAACCAAACTTTTTCTTCAATTTAATGAGTTTTCTGGTCCGTTACCGTCAGATTTTTCAATTTGGAAAAATCTTACTGTAATCAATTTATCCAATAATTCTTTTAATGGTAGCATCCCTTCTTCAATCTCACATTTGACTCATCTGGCATCTTTAGTCCTAGCTAATAACTCGCTTTCTGGTGAAATTCCTGATCTCAATATTCCGAGCCTGCAAGAGTTAAATCTAGCTAACAATAAGCTTAGTGGGATTGTGCCTAAATCCCTTCAGAGATTTCCAAGTGAAGCCTTTTCTGGCAACAATGTTACCTCTGCAAGTGTACTTCCCCCAGCTCTTCCAGTCCGCCCACCAAAGAAAACATCAAAACTTACTGAACCTGCATTACTGGGTATCATCATTGGGGCTTGTGTACTGGGATTTGTGGTTATCGCAGCTTTCATGATTCTGTGCTGCTATGACAAAGCAGGAGATGATGGAGGGCTACCAGTAAAGTCACAGAAAAAAGAAGTCACCCTGAAGAAAACGGCGTCTGAAAGTCAAGATAAAAACAAGATTGTATTCTTTGAGGGTTGCAATCTTGCATTTAACCTAGAGGATTTGTTGAGAGCATCAGCTGAGGTACTTGGAAAGGGAACCTTTGGCACAACATATAAGGCAGCTCTAGATGATGCAACCACAGTTGTGGTGAAAAGGTTGAAGGAAGTCACTGCTGGAAAACGCGAGTTTGAACAGCAGATGGAGGTTGTGGGGAGAATTAGGCATGAAAATGTCGCTGAACTCAGGGCATATTACTATTCCAAGGAGGAGAAGCTTATGGTATATGATTATTATGAACAGGGTAGTGTTTCTGCAATTTTACATGGTAAAAGAGCAGAAGGTAGAACCCATTTGGACTGGGATACCCGGCTAAGAATTGCAATTGGTGCAGCAAGAGGGATGGCCCACATCCACACTCAACAAGGAGGGAAACTTGTCCATGGAAACATAAAAGCTTCAAACATATTCCTCGACCCCAAGGGATTTGGTTGTGTGTCTGATATCGGTTTGGCAACGTTAATGAGTCCAATACCCTCACCAGCTCTGAGAAGTTCAGGATACCGTGCCCCTGAATTAACAGACAGCCGGAAAGCAACCCCTGCATCCGATGTCTACAGCCTCGGGGTGCTGCTGCTTGAGCTTCTGACTGGAAAATCCCCCATACATGCTATGGGAGGTGAGGAGGTAGTACACTTGGTTAGGTGGGTGAATTCTGTGGTCAGAGAAGAGTGGACAGCGGAAGTCTTTGATGTAGAGTTAATGAGGTATCCAAATATAGAGGAAGAAATGGTTGAGATGTTGCAATTAGGATTGGCATGTGTGGTCCGGATTCCAGAGCAAAGGCCGGAAATGCCTCATGTAGTGTCAATGCTGGAGGAAATACGTCGAGTAAACACTGGAAATCGATCATCCACTGAATCAAGATCAGGGGTTTCTACCCCAACTATTATTGCAGCTGAGATAGCCTCTTCTTCTGTTCCACAGTGA 1884 0.4459 MGWKLELFCFFLAAVVTETMLFSVAAEPVEDKQALLDFLHNIGHPHFLNWNESSSVCTSWRGVTCNNDQSRVIALRLPGDGLSGPIPTNTLSRLTELQTLSLRSNGITGPFPSGFSELKNLTKLFLQFNEFSGPLPSDFSIWKNLTVINLSNNSFNGSIPSSISHLTHLASLVLANNSLSGEIPDLNIPSLQELNLANNKLSGIVPKSLQRFPSEAFSGNNVTSASVLPPALPVRPPKKTSKLTEPALLGIIIGACVLGFVVIAAFMILCCYDKAGDDGGLPVKSQKKEVTLKKTASESQDKNKIVFFEGCNLAFNLEDLLRASAEVLGKGTFGTTYKAALDDATTVVVKRLKEVTAGKREFEQQMEVVGRIRHENVAELRAYYYSKEEKLMVYDYYEQGSVSAILHGKRAEGRTHLDWDTRLRIAIGAARGMAHIHTQQGGKLVHGNIKASNIFLDPKGFGCVSDIGLATLMSPIPSPALRSSGYRAPELTDSRKATPASDVYSLGVLLLELLTGKSPIHAMGGEEVVHLVRWVNSVVREEWTAEVFDVELMRYPNIEEEMVEMLQLGLACVVRIPEQRPEMPHVVSMLEEIRRVNTGNRSSTESRSGVSTPTIIAAEIASSSVPQ 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00941 627 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Bach12g00941 627 FunFam pollen receptor-like kinase 1 291 396 - -
Bach12g00941 627 FunFam Probable inactive receptor kinase RLK902 28 187 - -
Bach12g00941 627 Gene3D Ribonuclease Inhibitor 29 237 IPR032675 -
Bach12g00941 627 SUPERFAMILY Protein kinase-like (PK-like) 326 591 IPR011009 -
Bach12g00941 627 ProSiteProfiles Protein kinase domain profile. 322 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00941 627 SUPERFAMILY L domain-like 32 212 - -
Bach12g00941 627 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 397 604 - -
Bach12g00941 627 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Bach12g00941 627 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Bach12g00941 627 ProSiteProfiles Leucine-rich repeat profile. 190 211 IPR001611 GO:0005515
Bach12g00941 627 PANTHER OS05G0588300 PROTEIN 8 603 - -
Bach12g00941 627 ProSitePatterns Protein kinases ATP-binding region signature. 328 359 IPR017441 GO:0005524
Bach12g00941 627 Pfam Protein kinase domain 325 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00941 627 Gene3D Phosphorylase Kinase; domain 1 286 396 - -
Bach12g00941 627 Gene3D Transferase(Phosphotransferase) domain 1 398 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00941 Bach-Chr12 6667083 6669254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00941 20 604 Receptor kinase-like Gene Family AT4G23740 56.716 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bach12g00941 Pkinase 2.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00941 - - qsa:O6P43_015051 907.131