Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00936 ATGTCAAGCAATGCAATAACTCTTATTATCATGTTTCTTAATATCTCCTTGTTTCCTGCGATCTCTGCTTTGAACCAGGAAGGTCTTGCTCTACTTTCATGGCTTTCAACTTTCAATTCCTCTTATTCTGTTAATTCCTTCTCCTCATGGGATCCAACCCATAAAAATCCTTGCAAATGGGATTTTATTAAATGTTCTAAAGATGGGTTTGTTTCAGAGATCAGAATAACTTCCATTGCTATTCGTGGCAGCTTCCCCACTCAGCTGCTTTCTTTTGGTCATCTCACCACTCTTGTCATCTCAAATGGAAATCTCACCGGTGAGATTCCAGCTTCGGTAGGAAATTTGTCATCTTTGATTGCCCTGGACCTCAGCTTCAATACTTTATCAGGGACCATCCCAGCAGAAATAGGTAAGCTATCTAATTTGCAGTGGTTATCCCTGAACTCAAACTCCTTGCATGATGAAATTCCAGCAGAAATTGGAAACTGTTCAAAGCTTCGGCAGCTGGAACTGTATGACAACCAACTCGCCGGTAACCTTCCCATAGAAATAGGACAGCTGGGGAATCTTGAAATATTTCGAGCAGGAGGAAACCAGGATATTCATGGTGAAATTCCAATGCAGATATCAAACTGCAAATCTTTGGTTTATCTGGGTCTTGCAGATACTGGGATTTCAGGGGAGATTCCACGAAGTATAGGAGAACTTCAGAATCTTCAAACGCTTTCAGTCTATACAGCCAATCTCACAGGTCACATCCCACCAGAGATTCATAACTGTTCATCCCTGGAGAATTTGTTTCTGTATGAAAACCAGCTTTCTGGAATTATTCCTTATGAATTCGGTTCCATGGAAAGCCTCAAGAGGGTATTGCTATGGCAGAACAATTTACGTGGTGGCATTACAGAAACTCTGGGAAACTGTACAACTCTGATGGTTATTGATTTTTCTCTGAATTCTCTGGAGGGAGAGCTCCCTTCGACTCTGAGAAATCTAGTGGCACTGGAGGAGCTTCTTCTCTCAGATAATAACATTTCTGGAGTAATTCCTTCTTATATTGGTAATTTTTCCAGACTGAAGCAACTTGAATTGGATAACAACAAATTCTCTGGTGAGATTCCACCTGTCATTGGGCAACTGAGGGAACTCACCCTCTTCTTTGCTTGGCAGAATGAACTCCATGGAAGCATACCCACAGAGCTATCCAACTGTGAGAAACTTGAAGCAATTGATCTTTCACACAACTTCCTCACTGGGTCAATTCCAAATTCTCTCTTTCATCTAGAGAATTTAACACAACTGTTGTTGATATCAAATGAACTTTCAGGTCAAATTCCACCAGATATTGGCAGTTGCATCAGCTTGACCAGGTTACGCCTGGGATCGAACAAATTTACTGGTCAAATTCCATCAGAAATTGGTCTGATAAGCAGTCTGAGCTTTCTTGAGTTGTCAGATAATCTACTTAATGGAGAAATTCCCGAGGAGATTGGCAACCTCAACGAGCTAGAAATGCTAGACTTGCACAAAAATCAGCTGCAAGGAGCGATTCCTTCTTCATTAGAATTCTTACTTAGGCTCAATGTTTTAGATCTTTCTGGAAACAGATTAAGTGGGAGAATTCCAGAAATTTTGGGAAAGCTTACTTCTTTAAACAAGTTAATAATCAGTAGAAACCTTATCACAGGCTTGATCCCCAAGTCACTTGGCCTTTGTGGAGATTTGCAGTTGCTGGATATAAGCAACAATAGAATCACTGGTTCCATTCCAGAGGAGATTGGTCAGTTGCAAGGATTGGATATCCTCTTGAACTTGAGTTGGAATTCTCTAAGTGGCCCTATTCCAGATAGCCTCTCAAATCTCTCAAAACTTTCCACCTTGGACCTCTCCCACAACAACCTAAGCGGCACCCTCAGAGTACTAGGTAGTCTCGAAAATCTAGTATCACTAAATGTCTCCTACAATAGTTTTTATGGTTCCCTTCCTGACACAAAGTTCTTCAGGGATCTCCCTGCTGCTGCATTTGCTGGTAATCCTGGGCTCTGCACAAATAAGTGCCCCGTAAGTGGAACTCACCAAGGCATTAAGTCAATAAGAAACATCATTATCTACACTTTTCTTGGTGTTATTTTAACTGTTATGCTTGTGACTTTTGGAGTAATTTTAGTCCTCAGAATTCAGGGTGGCAGATTGGGGAGGAATTTTGATGAAGGTGGTGAAATGGAATGGGCTTTCACTCCATTCCAAAAACTCAACTTCTCCATCAATGACATTATCACCAAGTTATCTGATTCAAACATTGTGGGAAAAGGTTGCTCTGGAGTTGTTTATCGTGTTGAGACTCCAATGAACCAGGTTATTGCAGTAAAGAAGCTATGGCCAATAAAGAACGACGAGCCTCCAGAGATAGATCTCTTCTCTGCAGAAGTTCAGACTCTGGGATCAATAAGACATAAAAATATAGTGAGGCTTTTAGGTTGCTGTAATAATGGAAAAACTAGATTACTCTTCTTTGATTACATATGCAATGGGAGTTTGCATGGATTGCTCCACGAAAACAAATTGTTCTTGGATTGGGATGCAAGTCTTCAAAAGACTCTGCTATGGTTGCAGGTACTAACGAAAGAATTATTAATGTGTGAAACTGCAGAATACGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTGTACAGTTATGGTGTTGTGATCCTTGAGGTCTTAACAGGGATGGAGCCTACTGATCATAGGATTCCAGAGGGTTCACACATTGTCACTTTGGTTAGCAGTGAAATCCGAGAGAAGAAGCGAGAATTTACATCAATTCTTGACCAGCAATTACTGTTGCAATGTGGCACACGTACACCGGAGATGCTTCAAGTGCTAGGAGTGGCTCTCCTCTGTGTTAATCCATCCCCAGAAGAAAGACCTACAATGAAAGATGTAACAGCAATGCTCAAGGAGATCAGGCATGAAAACGACGATTTCGACAAACCAAATCTTCTCCATAAAGGAGCCACCAATCCAAAAGCAGCAGTTCATTGTTCAAGTTTCTCCAGATCAACTGAACCCCTAATAGAATCATCTTCATCGTCTTCCTCATAG 3108 0.4106 MSSNAITLIIMFLNISLFPAISALNQEGLALLSWLSTFNSSYSVNSFSSWDPTHKNPCKWDFIKCSKDGFVSEIRITSIAIRGSFPTQLLSFGHLTTLVISNGNLTGEIPASVGNLSSLIALDLSFNTLSGTIPAEIGKLSNLQWLSLNSNSLHDEIPAEIGNCSKLRQLELYDNQLAGNLPIEIGQLGNLEIFRAGGNQDIHGEIPMQISNCKSLVYLGLADTGISGEIPRSIGELQNLQTLSVYTANLTGHIPPEIHNCSSLENLFLYENQLSGIIPYEFGSMESLKRVLLWQNNLRGGITETLGNCTTLMVIDFSLNSLEGELPSTLRNLVALEELLLSDNNISGVIPSYIGNFSRLKQLELDNNKFSGEIPPVIGQLRELTLFFAWQNELHGSIPTELSNCEKLEAIDLSHNFLTGSIPNSLFHLENLTQLLLISNELSGQIPPDIGSCISLTRLRLGSNKFTGQIPSEIGLISSLSFLELSDNLLNGEIPEEIGNLNELEMLDLHKNQLQGAIPSSLEFLLRLNVLDLSGNRLSGRIPEILGKLTSLNKLIISRNLITGLIPKSLGLCGDLQLLDISNNRITGSIPEEIGQLQGLDILLNLSWNSLSGPIPDSLSNLSKLSTLDLSHNNLSGTLRVLGSLENLVSLNVSYNSFYGSLPDTKFFRDLPAAAFAGNPGLCTNKCPVSGTHQGIKSIRNIIIYTFLGVILTVMLVTFGVILVLRIQGGRLGRNFDEGGEMEWAFTPFQKLNFSINDIITKLSDSNIVGKGCSGVVYRVETPMNQVIAVKKLWPIKNDEPPEIDLFSAEVQTLGSIRHKNIVRLLGCCNNGKTRLLFFDYICNGSLHGLLHENKLFLDWDASLQKTLLWLQVLTKELLMCETAEYGYSLRITEKSDVYSYGVVILEVLTGMEPTDHRIPEGSHIVTLVSSEIREKKREFTSILDQQLLLQCGTRTPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHENDDFDKPNLLHKGATNPKAAVHCSSFSRSTEPLIESSSSSSS 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00936 1035 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 884 988 - -
Bach12g00936 1035 Pfam Leucine Rich Repeat 407 429 IPR001611 GO:0005515
Bach12g00936 1035 Gene3D Ribonuclease Inhibitor 187 387 IPR032675 -
Bach12g00936 1035 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 407 691 - -
Bach12g00936 1035 SUPERFAMILY Protein kinase-like (PK-like) 749 994 IPR011009 -
Bach12g00936 1035 Gene3D Transferase(Phosphotransferase) domain 1 755 873 - -
Bach12g00936 1035 Gene3D Ribonuclease Inhibitor 390 692 IPR032675 -
Bach12g00936 1035 ProSiteProfiles Protein kinase domain profile. 763 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00936 1035 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 739 841 - -
Bach12g00936 1035 MobiDBLite consensus disorder prediction 1013 1035 - -
Bach12g00936 1035 Pfam Protein kinase domain 766 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00936 1035 PRINTS Leucine-rich repeat signature 576 589 - -
Bach12g00936 1035 PRINTS Leucine-rich repeat signature 622 635 - -
Bach12g00936 1035 SUPERFAMILY RNI-like 351 664 - -
Bach12g00936 1035 SMART LRR_typ_2 573 597 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 429 453 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 549 572 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 622 644 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 477 501 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 140 164 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 261 284 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 525 548 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 645 678 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 357 381 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 333 356 IPR003591 -
Bach12g00936 1035 SMART LRR_typ_2 116 139 IPR003591 -
Bach12g00936 1035 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Bach12g00936 1035 Gene3D Transferase(Phosphotransferase) domain 1 874 1006 - -
Bach12g00936 1035 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 200 325 - -
Bach12g00936 1035 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 24 199 - -
Bach12g00936 1035 Gene3D Ribonuclease Inhibitor 24 184 IPR032675 -
Bach12g00936 1035 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Bach12g00936 1035 ProSitePatterns Protein kinases ATP-binding region signature. 769 797 IPR017441 GO:0005524
Bach12g00936 1035 MobiDBLite consensus disorder prediction 998 1035 - -
Bach12g00936 1035 SUPERFAMILY L domain-like 65 374 - -
Bach12g00936 1035 Pfam Leucine rich repeat 527 586 IPR001611 GO:0005515
Bach12g00936 1035 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Bach12g00936 1035 ProSiteProfiles Leucine-rich repeat profile. 624 646 IPR001611 GO:0005515
Bach12g00936 1035 Pfam Protein tyrosine and serine/threonine kinase 890 986 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00936 Bach-Chr12 6634200 6637585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00936 23 868 Receptor kinase-like Gene Family AT5G56040 47.356 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach12g00936 PK_Tyr_Ser-Thr 1.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00936 - - gmx:100807225 1539.63