Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00926 ATGTCGAGCACAGCTGGTCAAGTCATCAAGTGCAAAGCCGCGGTGGCATGGGAAGCAAACAAGCCACTGGTAATTGAAGAAGTAGACGTAGCGCCACCAGGTCCTGGTGAAGTGCGTTTGAAGATCCTCTTCACCGCTCTTTGCCACACTGATGTTTACTTTTGGGAAGCTAAGGGCCAAACCCCATTGTTTCCTCGTATATTTGGTCATGAAGCTGGAGGGATCGTGGAGAGCGTAGGTGAGGGCGTGACGCATCTGAAAGAAGGAGATCATGCCTTGCCTGTGTTCACTGGAGAATGTGGGGAATGCCCACATTGTAAGTCAGAGGAGAGCAACATGTGTGACCTACTTAGGATCAATACTGACAGGGGTGTAATGATTCATGATGGCAAGACAAGATTCTCCAAAAATGGACAGCCCATTCACCACTTTGTGGGAACCTCAACTTTCAGTCAGTACACTGTTGTCCATGCTGGTTGTGTTGCAAAGGTCGATCCTGCTGCTCCACTCGACAAAATTTGTGTTCTCAGTTGCGGAATTTGCACAGGTTTTGGTGCTACTGTTAACGTTGCAAAACCAAAGCCTGGTTCTTCTGTTGCAATCTTTGGTCTGGGAGCCGTTGGCCTTTCTGCTGCAGAGGGGGCAAGGGTTGCTGGTGCATCAAGAATAATTGGGGTTGATTTGAATTCTAGTCGATTTGAACTAGCAAAAAAATTTGGAGTCAATGAGTTTGTGAATCCGAAGGATCATGACAAACCTGTTCAAGAGGTCATTGCTGCAATGACCAATGGAGGTGTGGATCGTGCTGTTGAATGCACTGGCAGCATCCAAGCCATGATCTCAGCATTTGAATGCGTGCATGATGGTTGGGGTGTTGCTGTTCTTGTTGGGGTGCCTAGCAAGGATGATGCATTCAAAAGTCATCCCATGAATTTCTTGAATGAGAGGACTCTCAAGGGTACCTTCTATGGCAATTACAAACCCAGAACTGATCTTCCTAAAGTTGTGGACATGTACATGAGAAAGGAGCTGGAATTGGAGAAATTTCTGACTCACTCGGTGCCATTATCAGAGATTAACAAAGCATTTGAGTACATGTTGAAGGGGGAGTCCATCAGGTGCGTCATCCGCATGGAAGAATAG 1143 0.4681 MSSTAGQVIKCKAAVAWEANKPLVIEEVDVAPPGPGEVRLKILFTALCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKEGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMIHDGKTRFSKNGQPIHHFVGTSTFSQYTVVHAGCVAKVDPAAPLDKICVLSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLSAAEGARVAGASRIIGVDLNSSRFELAKKFGVNEFVNPKDHDKPVQEVIAAMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKSHPMNFLNERTLKGTFYGNYKPRTDLPKVVDMYMRKELELEKFLTHSVPLSEINKAFEYMLKGESIRCVIRMEE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00926 380 Pfam Alcohol dehydrogenase GroES-like domain 35 163 IPR013154 -
Bach12g00926 380 Gene3D - 183 321 - -
Bach12g00926 380 Pfam Zinc-binding dehydrogenase 206 338 IPR013149 -
Bach12g00926 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
Bach12g00926 380 PANTHER ALCOHOL DEHYDROGENASE 6 376 - -
Bach12g00926 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Bach12g00926 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Bach12g00926 380 SUPERFAMILY GroES-like 329 377 IPR011032 -
Bach12g00926 380 Gene3D - 20 370 - -
Bach12g00926 380 CDD alcohol_DH_plants 9 377 - -
Bach12g00926 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Bach12g00926 380 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00926 Bach-Chr12 6582496 6585107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00926 37 370 Monolignol Biosynthesis Gene Families AT1G72680 26.254 1.57e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00926 K18857 - gmx:100783858 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00926 12 6582496 6585107 Bach12g00926 12 6582496 6585107 ECH