Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00915 TGATGCTCAAGGATTCTCTCAACAAATTGGAAGCCTCCACCATAATAACAAGCTCAACTAAAGCTGCCATGGGGGATTCTGCCACTGGCTCAGCTGATGACACCAAGAGTTGTCCCCGTGGTCACTGGCGGCCCGCCGAGGATGAAAAACTCCGGCAACTCGTTGAGCAGTATGGTGCCCAGAACTGGAATTCAATTGCTGAGAAGCTTCAAGGACGATCAGGGAAAAGTTGCAGATTAAGGTGGTTTAATCAGCTTGATCCAAGAATTAACAGAAGGCCATTTACAGAAGAGGAAGAAGAGAGGTTACTAGCAGCTCACCGAATTCATGGAAACAAGTGGGCACTGATTGCCAGGCTTTTTCCCGGTCGAACTGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCACGAAAGCAAAGAGAACAATCTAAGTTATGTAGCACGAGAAGCTTTCAAGATGTTTATAATGATTCTAACTTTCCCACCTCAAATGAGAAAAGACAAAAATCTCAGGATGTTTTTAGCTCAAGAATTGGGTTAGAGAATGCCAGATTCTTTGACTTCCGGAGCCTCGACAAAGATAGGATAATTGCAGCAGATTCCCCCTCCAGTTCATGGAATTTTGCATCCATGCCAACCTCTTACACTAGTTCTCATGTTGTTGATTCATTTAGAAAAGAAGGGAGAGACTGCTACTTCAATTCTTACTCTAATATGTTCCTCTCTGAATGCTCCAAAGTTTCAGATAAATTTCTCTACAGAATTTACCCAAATTCTTCATCCTCCAGTACCAGCTTTCGCGGTTCCACCAGTACATTGGCGCTTCCCAATTACAGGAGGGCTGTTCCTAGTCATTTTGGATTCCTTGCCACTGCTGATGATGGAAGGATAAAGAAGGACCTGATGAGTTTGCGAGACAACTCAACCACATTCCCAAAGTTGAGACCTTCAATGGAGCAAGAGCAACCAGACGAGCCTAATATTGAACACAAAGAGGTTCCTTTCATTGATTTTCTTGGAGTGGGCGTCTCTTCGTCATAATAATCAGTGGAGTATTTATATTTAACATCATATAATACATATATAGCTAGTTTAGCTAGCTAGCTTTGATCTAGTTTAGCATTGTTAGTTTAGCTATAATCATATTATATATTACAAGTAAACTATATTATGAATGTGGCTTATGACTTTTGAGCCTTTCAGTTCAGCTGCAAGACTGCTCATTTTGTAATTAGAGTGATCAAGAATCCAAGGTTTTTT 1265 0.4111 MLKDSLNKLEASTIITSSTKAAMGDSATGSADDTKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCSTRSFQDVYNDSNFPTSNEKRQKSQDVFSSRIGLENARFFDFRSLDKDRIIAADSPSSSWNFASMPTSYTSSHVVDSFRKEGRDCYFNSYSNMFLSECSKVSDKFLYRIYPNSSSSSTSFRGSTSTLALPNYRRAVPSHFGFLATADDGRIKKDLMSLRDNSTTFPKLRPSMEQEQPDEPNIEHKEVPFIDFLGVGVSSS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00915 347 CDD SANT 42 83 IPR001005 -
Bach12g00915 347 Gene3D - 39 90 - -
Bach12g00915 347 CDD SANT 93 133 IPR001005 -
Bach12g00915 347 Pfam Myb-like DNA-binding domain 42 102 - -
Bach12g00915 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 85 IPR017930 -
Bach12g00915 347 PANTHER MYB PROTEIN-RELATED 39 172 - -
Bach12g00915 347 MobiDBLite consensus disorder prediction 310 330 - -
Bach12g00915 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Bach12g00915 347 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Bach12g00915 347 SUPERFAMILY Homeodomain-like 37 132 IPR009057 -
Bach12g00915 347 FunFam MYB transcription factor 92 162 - -
Bach12g00915 347 Gene3D - 93 155 - -
Bach12g00915 347 FunFam MYB transcription factor 39 90 - -
Bach12g00915 347 ProSiteProfiles Myb-like domain profile. 39 85 IPR001005 -
Bach12g00915 347 MobiDBLite consensus disorder prediction 20 41 - -
Bach12g00915 347 SMART sant 90 138 IPR001005 -
Bach12g00915 347 SMART sant 38 87 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00915 Bach-Chr12 6495261 6496837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00915 37 347 MYB Transcription Factor Family AT1G17950 43.987 5.66e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach12g00915 Myb_DNA-bind_6 2.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00915 K09422 - gmx:100802283 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00915 12 6495261 6496837 Bach12g00915 12 6495261 6496837 ECH