Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00878 ATGCTGAAGACGAAGGCATTCAAGGGCGCGAACGTGTTCATGTCGCGGAACCTCGTGCCGCCGGAAGTCTTCGACGCACTTCACGACGCCCTCAAGGAAAATGGTGCAGAAGTCTTTCTTTGCTGCGATCCTTCGCGCTATGGCCCTAACGATTACCACATCATATCTTCAATTCATCATGTAATAGCTTGGTGCTCTCTGAATGCAGAATTTATTTTGAATTCGAGTCTCCTTTCTGATTTCATACTTTTTTTGCAGGAGAAGTTTAAGGATCTTAGAGCCAAGGGTTGTAATTTGCTTGGTCCTCAATGTTTGCTCTCATGTGCAAAAGAACATAGAGCTCTGCCTAAACAAGGTTTCACTTGTTGCCTCGCTATGGATGGTGTCAAAGTACTTGCATCTGGTTTTGACATGGACGAGAAGGTTAAGATAGGAGAGTTAGTGACTGCGATGGGAGGAGTTCTACATACTAAAGCATCATTGGATGTCAGTTTTGTCATTGTGAAAAATGTTTTAGCTGCAAAGTACAAGTGGGCTTTGCATATCCTGAAGAAACCAATAGTCACCATTAATTGGTTATACCAATGCTGGGCTGAGCACCGTGTTGTTCCTCAAGAGTCATACAGAGTTCCTCCTTTTTCTGGGTTGACAATTTGTGTTACCAAGATTCCAGCAGATGAGCGCATACAGATTGAGAAGCTTATTTTACAAAATGGTGGAAAATACTCTGGAGAACTGACAAAGAAGTGCACACATCTGATTTTTCCTGAAGGAGACAAATACAAAGTTGCCAAACGATGGGGCCACATTCATATTGTGACGAGGAAATGGTTTGATCAATCTCTTGTTCGAAGAGCATGTCTTAATGAGGAGTCGTATCCTGTTCAGGATGGATCTGTACAGTCGCATAAAATAACAAAACATGGCCAAGAAAAGGACATTAGAAAGTTACAATCTGCAGCGTCCACTGGGGCTATAGATTCAGATATACCAGTTGTTTCCTGTGCTAAGTTTTCGGATGGAGACCTAGAAGCTACACAGTCGCAGAATACGTCTTCTGCATTTTCGGTTCCTCCTTCCTTTGTTGAAGAAGAAGATGCTGCAGGACCTCCAGTGCCGCCCTGCAAAGAACCGAACCTTGATGACGCTGTTGCCAACGATTCTGAATCTGACGATAATGACTTGTACTTATCAGAGTGCAGAATACTACTTGTTGGCTTCGAAGCTTCGGAAATGCGAAAACTAGTCAGTATGGTGCGCAAAGGTGGAGGCTCCAGATATATGACATTTAATGATAAGCTGACACACATGGTAATTGGAAACCCTTCAGAAACCGAAAAGAAGGACGTTAGGAGCCTTGCTGCCTTGGGGGTCATTTATGTCGTTAAAACCACTTGGCTTGAAGATTGTGACCGTGAAAGGAAAGAAGTCCCTGTTCTAAGGAGACATATCGCTTATGATTTACTTCTTCCAAAAGGCTTTGCAAAAGGAGCAGTAACAGGCATTTTAAGCATGAATCGAGGTAAAAGCATCACCATTCCTCAAAATTTGCAGACTGATCAGGCGATTGGCACTATTGAGTCTGGCGTTGTAGTGTTATCATCTTTGGAGAAAAACAAGGAATTGAAAACAGACATTGGTGTAAATGATCACCTCTCTCCTAAAGCAATGGGCAGATCTACACAGAAAAATCAACATCCTGTTAGTAATAAAATGAAGGGTCAACAAATGGTGCATCTTGACTTCAGTGTTCAAAATGTGAGGTCATCAACCGTTTTCAGAGGGAAAGTATTTCGTTTTTCGAATTCATTTCCTGAAGAAAGGAGAGCTGAGGTTGTTCAATGGATAAGTCAAGGGGGAGGAGAGGTAGTAAATGGCCATGCAAAACAGAATGTCCATTATACTGTTGAGTGTCATGGTGTAACACCAAAGTGTACAGATGCTCAGCAAAGTACGTGTATTTCCACTCATTGGATACGATCTTGTTTAGAGGATGGATCCTTGCATGATGTTTCTAGTCATATTCTTTATTCTCCACTTCCCTGCCGCGTTCCCTTTCTTGGGTTTGAAAGCTTCAGGTTTTGTGTTTCACAATATGAGGAGAAAGACAGAATTCTACTTCGGAACTTGTGTTTTGTTCTTGGAGCAAAATTTGTAGAGAAGTTGACTAAGAAGGTCACCCATTTGTTGTGTCAATTCACCAATGGGCCCAAATATGAGGCTGCTTGTAAGTGGGGGATCCAATCAGTTACATCAGAGTGGATTTTTGAATGTGTCAAACAGAATGGAGTTGTTGCCGTTGATCCATTTTTACCTAAAGAAGTCACTGCTCAAGACCAGGAGGCAGGAATTTGCACTGTGAGTCAATTTCCCACCCAAGCTGTTCGAATGATAAGTGCAGACAGCTCTTCCCAGTTTCCAAGTCAGTCACAAAATTGGAGAAACACTGCAAATCAAAGTGTAGGTCGTGGAATTGACAATTATGGGAATAATACTAAAATATCAAGTGTTTGCAGCAAAAAAGCAAGGCTTTTGGAAGAGCCTGTTCTATATGGTAAGGTGTCTTCCGAAGTTGATCCGAATTTCCATATCTATGACATGAATTCTACTGGAGACAATACGCTTGAAGATACAAGGGAGGTTTCTTATGCTGTTCCTGATGTTGCTGCCGCAATTGAGGACCTGCTAGAGCATACTAGCAGGATGAATGATCAGAAGTCACCGGGGAGGACAGGGTGTCATAAAAGTATTTTCTCATCTGATTGTTCTGTACTTGGCGAAGACCACCATTCAAGTCCTCAGACTGTCATTGGATTATCTAACCACTGGTTAAACAGAAGCAGCAGAAAAGACGATAGTGGTGAGGCTTCTAAAGATCGAAGTGCAGGCATTTATGATGGTTTTAGTGAAACACAAACAGAATCTCAGGTTGTTGGTTACGAAGAAGATTTGTCAGGAAGGCAAAAGCTTATAGACAGAGTCCGAACTCGAAGCAGTCTAGTCTGA 3006 0.4218 MLKTKAFKGANVFMSRNLVPPEVFDALHDALKENGAEVFLCCDPSRYGPNDYHIISSIHHVIAWCSLNAEFILNSSLLSDFILFLQEKFKDLRAKGCNLLGPQCLLSCAKEHRALPKQGFTCCLAMDGVKVLASGFDMDEKVKIGELVTAMGGVLHTKASLDVSFVIVKNVLAAKYKWALHILKKPIVTINWLYQCWAEHRVVPQESYRVPPFSGLTICVTKIPADERIQIEKLILQNGGKYSGELTKKCTHLIFPEGDKYKVAKRWGHIHIVTRKWFDQSLVRRACLNEESYPVQDGSVQSHKITKHGQEKDIRKLQSAASTGAIDSDIPVVSCAKFSDGDLEATQSQNTSSAFSVPPSFVEEEDAAGPPVPPCKEPNLDDAVANDSESDDNDLYLSECRILLVGFEASEMRKLVSMVRKGGGSRYMTFNDKLTHMVIGNPSETEKKDVRSLAALGVIYVVKTTWLEDCDRERKEVPVLRRHIAYDLLLPKGFAKGAVTGILSMNRGKSITIPQNLQTDQAIGTIESGVVVLSSLEKNKELKTDIGVNDHLSPKAMGRSTQKNQHPVSNKMKGQQMVHLDFSVQNVRSSTVFRGKVFRFSNSFPEERRAEVVQWISQGGGEVVNGHAKQNVHYTVECHGVTPKCTDAQQSTCISTHWIRSCLEDGSLHDVSSHILYSPLPCRVPFLGFESFRFCVSQYEEKDRILLRNLCFVLGAKFVEKLTKKVTHLLCQFTNGPKYEAACKWGIQSVTSEWIFECVKQNGVVAVDPFLPKEVTAQDQEAGICTVSQFPTQAVRMISADSSSQFPSQSQNWRNTANQSVGRGIDNYGNNTKISSVCSKKARLLEEPVLYGKVSSEVDPNFHIYDMNSTGDNTLEDTREVSYAVPDVAAAIEDLLEHTSRMNDQKSPGRTGCHKSIFSSDCSVLGEDHHSSPQTVIGLSNHWLNRSSRKDDSGEASKDRSAGIYDGFSETQTESQVVGYEEDLSGRQKLIDRVRTRSSLV 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00878 1001 CDD BRCT 129 196 - -
Bach12g00878 1001 Gene3D BRCT domain 689 789 IPR036420 -
Bach12g00878 1001 FunFam Transcription coactivator 375 484 - -
Bach12g00878 1001 Pfam BRCT domain, a BRCA1 C-terminus domain 590 673 IPR001357 -
Bach12g00878 1001 SUPERFAMILY BRCT domain 211 296 IPR036420 -
Bach12g00878 1001 FunFam Transcription coactivator 585 682 - -
Bach12g00878 1001 SUPERFAMILY BRCT domain 688 773 IPR036420 -
Bach12g00878 1001 SUPERFAMILY BRCT domain 388 478 IPR036420 -
Bach12g00878 1001 MobiDBLite consensus disorder prediction 549 569 - -
Bach12g00878 1001 MobiDBLite consensus disorder prediction 555 569 - -
Bach12g00878 1001 MobiDBLite consensus disorder prediction 344 358 - -
Bach12g00878 1001 ProSiteProfiles BRCT domain profile. 208 295 IPR001357 -
Bach12g00878 1001 CDD BRCT_TopBP1_rpt2_like 689 762 - -
Bach12g00878 1001 FunFam DNA topoisomerase II binding protein 1 213 303 - -
Bach12g00878 1001 MobiDBLite consensus disorder prediction 298 320 - -
Bach12g00878 1001 Pfam twin BRCT domain 130 192 IPR001357 -
Bach12g00878 1001 Pfam twin BRCT domain 693 754 IPR001357 -
Bach12g00878 1001 Pfam twin BRCT domain 216 277 IPR001357 -
Bach12g00878 1001 SUPERFAMILY BRCT domain 87 211 IPR036420 -
Bach12g00878 1001 ProSiteProfiles BRCT domain profile. 588 676 IPR001357 -
Bach12g00878 1001 SMART BRCT_7 686 762 IPR001357 -
Bach12g00878 1001 SMART BRCT_7 123 200 IPR001357 -
Bach12g00878 1001 SMART BRCT_7 590 666 IPR001357 -
Bach12g00878 1001 SMART BRCT_7 210 285 IPR001357 -
Bach12g00878 1001 SMART BRCT_7 394 474 IPR001357 -
Bach12g00878 1001 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 1 999 - -
Bach12g00878 1001 SUPERFAMILY BRCT domain 590 678 IPR036420 -
Bach12g00878 1001 Gene3D BRCT domain 212 296 IPR036420 -
Bach12g00878 1001 ProSiteProfiles BRCT domain profile. 126 210 IPR001357 -
Bach12g00878 1001 ProSiteProfiles BRCT domain profile. 392 484 IPR001357 -
Bach12g00878 1001 Gene3D BRCT domain 123 211 IPR036420 -
Bach12g00878 1001 ProSiteProfiles BRCT domain profile. 689 772 IPR001357 -
Bach12g00878 1001 MobiDBLite consensus disorder prediction 945 959 - -
Bach12g00878 1001 CDD BRCT_TopBP1_rpt2_like 211 282 - -
Bach12g00878 1001 Gene3D BRCT domain 379 481 IPR036420 -
Bach12g00878 1001 Gene3D BRCT domain 585 682 IPR036420 -
Bach12g00878 1001 MobiDBLite consensus disorder prediction 945 977 - -
Bach12g00878 1001 FunFam Transcription coactivator 123 211 - -
Bach12g00878 1001 MobiDBLite consensus disorder prediction 344 391 - -
Bach12g00878 1001 Gene3D BRCT domain 78 120 IPR036420 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00878 1 1001 Core DNA Replication Machinery Family AT1G77320 51.862 0.0 960
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00878 K10728 - qsa:O6P43_015132 1352.04