Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00872 ATGCTAGACGAATTCTCCCAACACCAACACTACCCTTCCAGGTTCCAACAGAAAGAAAGGGAAATGGATAGGCAACTCTTGCTCCTTTCCCTCCTCATCTCCCTCTTCACCATTTTCAAAGCTGGTTCATCTTCTTCATGTCCCATAGATCTGAGCTACGTTGGAACTTTCCCTTGGGACACTTCAACTTGCAAAGACTCAAATGGAACCCACTGCTGCCAAACTCTGCTTAGCCTCTTTGGCATAGGACTTTCTCAATATCTCAAAGACACTTCCATGTTTCAACTCCCTGATGCAAGTTCTTCCTCTTCTTGCCTATCTGATTTACAAACCAAGCTTGCAGCTTTGAAGTTGCAGCCTTCTCTTGTCTCTTCTTGCTTCCATAACTCAACCCAATTTGTCAGTAGTACTTCACATTGTGCAGGTATTAGGACAATTCAAGATTGGAATCAAAAGGTGGGCATGATGTCCCCATTAGACACATCTTGTAATGGGGACATGACTACTCGCTGCAGCTCTTGTCTTGATGCTGGCATGAAAGTGACTTCTCAATTGACTGCTCTCGACCCAAATGCCACAAAATGTTTCTATTTCACAATCTTATATGCTGCGTCTATTGTAAACCAGTTTGGTCCAAAGGATGTGAGAACAGCCGCTTGCATAATGGGCATGCCGCTGTCTGGTGCAGCAGATAAAGGATCTTCAAACAGAGATCGCAAACTGAAACTGGTTTTTGGGTTATTGGGTGCTCTAATTGGTGTTCTGCTTGCCTTTGTGCCAATCATCATATACAGGAAGTGGAATAAGAAAAGGAAGGAAAAGCTTTATCACAGAGCAGTTGTAAGCAGTGTCAGGGCCAGTGTCTTGCCTCACACTGGTGCAAAATGGTTCCATTTATCAGAACTTGAAAAAGCAACAAATAAATTTTCCCAGAAAAATATGATTGGTCAAGCACCAGAGTATGCTCTGTACGGGCAACTCACAGAGAAAAGTGACGTTTACAGTTTTGGAATCGTGATTCTTGAAGTGATGAGTGGAAGGAAAGTACTTGATACTTCTGACTCATCGGTGCGTTTGATCACAGATTGGGCTTGGGATCTTGCAAAATCAGGGAACATGGTGGAAATTTTTGATGAGTCAATAAGAGAACAAGGGCCAAAAAGAATCATGGAAAGGTTTGTTCTTGTTGGGATTCTTTGTGCTCATGTCATGGTGGCATTGAGGCCTACTATTGCTGAGGCACTCAAGATGTTAGAGGGTGATACTGATATTCCCAATTTACCAGACAGGCCAGTACCACTTGGTCATGAATCCTTTCAGTCTTCTCTTTTGTATGGTTCACTAAGAAGTGGAAGAACGACACCGTATAGTTCCTCATCGATTCAAGTATGA 1392 0.4289 MLDEFSQHQHYPSRFQQKEREMDRQLLLLSLLISLFTIFKAGSSSSCPIDLSYVGTFPWDTSTCKDSNGTHCCQTLLSLFGIGLSQYLKDTSMFQLPDASSSSSCLSDLQTKLAALKLQPSLVSSCFHNSTQFVSSTSHCAGIRTIQDWNQKVGMMSPLDTSCNGDMTTRCSSCLDAGMKVTSQLTALDPNATKCFYFTILYAASIVNQFGPKDVRTAACIMGMPLSGAADKGSSNRDRKLKLVFGLLGALIGVLLAFVPIIIYRKWNKKRKEKLYHRAVVSSVRASVLPHTGAKWFHLSELEKATNKFSQKNMIGQAPEYALYGQLTEKSDVYSFGIVILEVMSGRKVLDTSDSSVRLITDWAWDLAKSGNMVEIFDESIREQGPKRIMERFVLVGILCAHVMVALRPTIAEALKMLEGDTDIPNLPDRPVPLGHESFQSSLLYGSLRSGRTTPYSSSSIQV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00872 463 Pfam SPARK 43 195 IPR043891 -
Bach12g00872 463 Gene3D Transferase(Phosphotransferase) domain 1 297 425 - -
Bach12g00872 463 PANTHER OS01G0750732 PROTEIN 63 317 - -
Bach12g00872 463 Pfam Protein tyrosine and serine/threonine kinase 317 414 IPR001245 GO:0004672|GO:0006468
Bach12g00872 463 SUPERFAMILY Protein kinase-like (PK-like) 318 437 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00872 Bach-Chr12 6148160 6150043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00872 272 440 Receptor kinase-like Gene Family AT1G11050 52.973 3.45e-49 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bach12g00872 SPARK 2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00872 - - qsa:O6P43_015136 377.481