Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00869 ATGTCTACCCAGAACCGTCGTTCGTCGTTTTCTTCCTCAACGACATCATCTTTGTCGAAGCGACATGCATCGTCGGAGAATGTTGGAAAGGTCACCGCTGTGCCTCCACACATGGCTAAGAAGCGAGCGCCTCTCAATAACCTGACTAATCAAAAGAATGTGGCTCATAGTGCTTCGAGGAATTCAATGCCATCATCTACTTTGGTACCATGCACAACCAAAATTTCCAAGGCAAAGAAGGGGCCCACTGCATCCACCAGGGACTCAGCATTTTCTGGGAATAAATTGCCGGGTTTGTCAAATGCTAAATCAAGTGCAGTTGCTTTACCTAAAGTTGCTTCTTTTCTTCCAAGGGATGAAGCTGCTCCTACAGTGGCCACTGTCATTTTTCCTGTTTCAAGCAGCATGGATGTTTCTCCTAGTAAATCAGATACAATGTCAGTTTCCATGGATGAGAGCATATCTACTTGTGATTCTTTCAAGAGTCCCGAAGTTGAATATCTCGATAATAGCAATATTTCAGCTGTTGATTCTATTGATAGAAAGACATTCAGCAACCTTAATATTTCAGACAATGCAGATACAGCAGGCAGTATCCGTAATAAGGACATACTCGTTGAGTTGGAAAGACATGACAAAGTTGTCAATGTCGATAACAATTACATGGATCCACAGCTTTGTGCAACCTTTGCTTGTGATATCTACAAGCACTTGCGTACATCTGAGGCAAAGAAAAGACCTTCCACAGATTTCATGGAGAAAATTCAAAAGGACATAAATCCTAGCATGCGTGCTATATTGATTGACTGGCTTGTGGAGGTGGCTGAAGAGTATCGGCTTGTTCCTGACACATTGTATTTGACAGTTAACTACTTAGATCGGTATCTTTCCGGGAACGCGATGAGTAGGCAAAAACTACAATTACTAGGTGTTGCCTGCATGATGATTGCCTCTAAATACGAGGAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTACATAACTGATAATACCTATTTCAAAGAAGAGGTTTTGGAAATGGAATCTGCTGTTTTGAATTATCTGAAATTCGAAATGACAGCACCAACAATAAAATGTTTCTCAAGACGATTTGTTCGAGCAGCTCAAGGAGTCAATGAGGTTCCATCATTGCAATTAGAGAGCTTGGCCAACTACATTGCCGAATTGTCTCTGCTGGATTACAGCATGCTTCGTTATGCGCCATCAATAATAGCTGCTTCTGCCATTTTTCTGGCCAAGTTCATACTTTTCCCTTCAAATAAACCATGGGATTCTACTTTGAAGCATTACACACAATACCAGCCTTCTGATTTGTATGCATGTGTAAAGGATCTTCATCGCCTGTGCTGCGACAGTCATAGTTCTAATTTGCCTGCAATTCGGGAGAAATACAGTCAGCATAAGTACAAATATGTGGCGAAGAAGTACTGCCCACAGTCAATACCTCAAGAATTTTTCCAAAATTGA 1488 0.4147 MSTQNRRSSFSSSTTSSLSKRHASSENVGKVTAVPPHMAKKRAPLNNLTNQKNVAHSASRNSMPSSTLVPCTTKISKAKKGPTASTRDSAFSGNKLPGLSNAKSSAVALPKVASFLPRDEAAPTVATVIFPVSSSMDVSPSKSDTMSVSMDESISTCDSFKSPEVEYLDNSNISAVDSIDRKTFSNLNISDNADTAGSIRNKDILVELERHDKVVNVDNNYMDPQLCATFACDIYKHLRTSEAKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYLDRYLSGNAMSRQKLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLEMESAVLNYLKFEMTAPTIKCFSRRFVRAAQGVNEVPSLQLESLANYIAELSLLDYSMLRYAPSIIAASAIFLAKFILFPSNKPWDSTLKHYTQYQPSDLYACVKDLHRLCCDSHSSNLPAIREKYSQHKYKYVAKKYCPQSIPQEFFQN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00869 495 FunFam Mitotic cyclin 6 247 347 - -
Bach12g00869 495 ProSitePatterns Cyclins signature. 264 295 IPR006671 -
Bach12g00869 495 Pfam Cyclin, N-terminal domain 233 359 IPR006671 -
Bach12g00869 495 FunFam Cyclin A1 349 481 - -
Bach12g00869 495 SUPERFAMILY Cyclin-like 362 487 IPR036915 -
Bach12g00869 495 SMART Cyclin_C_2 362 485 IPR004367 -
Bach12g00869 495 Pfam Cyclin, C-terminal domain 362 481 IPR004367 -
Bach12g00869 495 CDD CYCLIN_AtCycA_like_rpt1 223 358 - -
Bach12g00869 495 CDD CYCLIN_AtCycA-like_rpt2 362 476 - -
Bach12g00869 495 MobiDBLite consensus disorder prediction 1 26 - -
Bach12g00869 495 MobiDBLite consensus disorder prediction 1 97 - -
Bach12g00869 495 Gene3D - 233 481 - -
Bach12g00869 495 SUPERFAMILY Cyclin-like 223 359 IPR036915 -
Bach12g00869 495 PANTHER CYCLINS 174 473 IPR039361 -
Bach12g00869 495 SMART cyclin_7 269 353 IPR013763 -
Bach12g00869 495 SMART cyclin_7 366 454 IPR013763 -
Bach12g00869 495 MobiDBLite consensus disorder prediction 44 97 - -
Bach12g00869 495 Gene3D - 247 360 - -
Bach12g00869 495 PIRSF Cyclin_A_B_D_E 1 493 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00869 Bach-Chr12 6123338 6126393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00869 4 495 Core Cell Cycle Gene Families AT1G44110 62.298 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00869 K06627 - qsa:O6P43_019780 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00869 12 6123338 6126393 Bach12g00869 12 6123338 6126393 ECH