Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00862 ATGGAAGTTTCTTCTTCCCCAGATAATCCTCCAATGCCTGAGTTTCTTTCCTCATATACCAGAACAGCTTTGTTCCATTCTCAATCCACCAATTGTACCAGCACACCACTTTGTCCTTCCATGGAACGTGAGGAGGACAAGCAATCTTCCCACAAGAACCCCTACACAGAATTTGAGCAAGTTAACAACGATTACATTCTAGCAATAACATTGCAAGATCAAGAAAGAGCATTGACAATGCTCTCAACCATTGAAAGCGAAAGCGAAAGCGAAAGTGAAGAAGCTGAAAGTGACTCTTCTTTCATCGATGATGATGATGAAGATGCTGATTTTTTCCAGAGCGAAACCTTGGAAGGTGATCTTCAGTTTCTTGAGGGCGAAGGAAGCAACGATGATGAAGATATGGAAGAAGATGACCTTGACCTAGATGATCTAACTTACGAAGAGTTAATTGAATTGGGGGAATTCATTGGAGCTGAGAGGAGAGGATTATCAGCCAATGAAATCCCTTCCTGCTTACATCCTTATATTTTCCATTCTGCAGAGAACAAAACTGGAACAGATCGCTGTGTGATTTGCCAGGTTGAATATCAAGAAGGTGAAGCCCTTGTGGCACTTGAATGTGAGCACCCTTATCATGCAGATTGTATAAGCAGATGGCTTCTGATTAAGAAGGCTTGCCCAATATGCAGCAGTGAAGTTTCAAGTCACAAGATGGCCAAGAATTTGCCCAATTTGCTCCCTTAA 747 0.4203 MEVSSSPDNPPMPEFLSSYTRTALFHSQSTNCTSTPLCPSMEREEDKQSSHKNPYTEFEQVNNDYILAITLQDQERALTMLSTIESESESESEEAESDSSFIDDDDEDADFFQSETLEGDLQFLEGEGSNDDEDMEEDDLDLDDLTYEELIELGEFIGAERRGLSANEIPSCLHPYIFHSAENKTGTDRCVICQVEYQEGEALVALECEHPYHADCISRWLLIKKACPICSSEVSSHKMAKNLPNLLP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00862 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 167 241 IPR013083 -
Bach12g00862 248 SUPERFAMILY RING/U-box 189 237 - -
Bach12g00862 248 SMART ring_2 190 230 IPR001841 -
Bach12g00862 248 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 41 127 IPR043312 -
Bach12g00862 248 MobiDBLite consensus disorder prediction 87 106 - -
Bach12g00862 248 FunFam E3 ubiquitin ligase BIG BROTHER-related 156 237 - -
Bach12g00862 248 MobiDBLite consensus disorder prediction 83 106 - -
Bach12g00862 248 ProSiteProfiles Zinc finger RING-type profile. 190 231 IPR001841 -
Bach12g00862 248 MobiDBLite consensus disorder prediction 29 56 - -
Bach12g00862 248 Pfam Ring finger domain 189 230 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00862 Bach-Chr12 6092442 6093188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00862 137 234 C3H Transcription Factor Family AT3G63530 51.000 6.11e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00862 K19045 - qsa:O6P43_015155 229.95