Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00860 ATGACTGAGCCTCTCTTTTCTCATACTTTCACATTCCTCCAATTCACTCTGTTTCTCTGTCTCGTACCTCCTTTTCTGCCTCCATTGACGTTGCTCTCATTCAGGTCCTTCTCAGGTAGGGAATTTCGAGAGTGGTGGCTCCAGCTAATATTTGAGGGAAGCTCACTTCCTTTGAAGGGTTTTGAGAGTATTGGAGACGGCGTCTTGAGTGGAGAATGTGGTTTTGGAGGTAGTTTAAAGGAGGGAGCTCTTCGGCATTTGCAGTTTATGAACTGTGATTACACTATTAAGAGCAGACAGAATGCCTTCAGCGACATTTTTATACCCATTGCTTCCAGGGAATCTAATGGAGCAACAGGAGTGGATGATCCAGAATCTACAATGGCTACAGTTGCTCGTTTTGTTGAGCAACTGCATGCCAGCGTGTCATCACCACCTGAGACAGAACTTATCACAACACGTTTGCTGGGTATTGCTAGGGCAAGAAAGGATGCGAGAACACTTATCGGTTCTCATGGTCAAGCAATGCCATTATTCATAAACATTCTCAGAAATGGAACTCCTCTGGCAAAAGTTAATGTTGCCGCCACTCTCAGTGTCCTGTGCAAAGATGAAGACTTGAGGTTAAAAGTACTTCTTGGTGGTTGTATCCCACCATTACTGTCACTTTTAAAGTGTGAATCCACTGAGGCCAGGAAGGCAGCAGCTGAGGCAATTTATGAAGTTTCCTCCGGTGGTCTTTCAGATGATCATGTTGGTATGAAAATTTTTATTACTGAAGGTGTAGTTCCAACCTTATGGGATCAACTAAATCCGAAGGACAAACAAGACAAAGTTGTACAGGGTTTTATTACTGGGGCATTAAGAAAATTGTGTGGTGACAAAGATGGCTACTGGAAAGCAACACTAGAAGCTGGAGGTGTGGATATTATCGTAGGTCTCCTGTCTTCAGACAATGCTGTTGCTCAGTCAAATGCAGCTTCTCTGTTGGCACGTTTAGTGTTGGCTTTTAGTGATAGCATTCCCAAAGTAATAGACTCTGGAGCTGTCAAAGTTTTACTTAAACTTGTTGGTCTAGAAAATAACATTTCTGTGCGAGCAAGTGCTGCTGATGCTTTAGAGGCCCTTTCATCAAAGTCAACCAGTGCTAAGAAAGCTATTGTTAGTGAAGATGGGGTTCCAATCCTTATTGGAGCTATAGTTGCTCCTTCTAAGGAGTGTATGCAAAGTAATTGTGGCCAGGCTTTGCAGGAACATGCAACTTGGGCTTTGGCAAATATTTATGGTGGAATGTCTGCCTTAATACTATATCTTGGAGAACTTTCCCATTCTCCTCGCCTTGCTGCACCAGTTGGTGATATAATTGGGGCTCTTGCTTATACACTGATGGTGTTTGAGGAAAATCTTGATGATGTTGAAGGGGAAGCCTTTGATGCAACTAAAATAGAGGATATTCTAGTGACACTACTAAGGCCCCGAGACAGTAAGTTGATTCAAGAACGTGTCCTGGAGGCTATGGCTAGTTTATACGGAAATATCTGTCTCTCGAAGTGGCTCAATCATGCAGATTCAAAGAAGGTTCTTATTGGATTAATAACTATGGCTGCTGCAGATGTGCAAGAGTATCTGATACTTTCCTTGACAAGTTTGTGCTGTGATAGGTTGGGAATATGGGAGGCTATTAACAAAAGAGAAGGTATTCAGTTACTTATATCATTGCTGGGACTATCCAGTGAACAGCATCAAGAGTACGCAGTTCACTCACTAGCAATCTTAACTGACCAGGTTGATGACAGTAAGTGGGCAATTACTGCAGCTGGAGGGATCCCTCCACTGGTGCAGTTGTTAGAAACAGGATCCCAGAAGGCAAGAGAGGAAGCAGCTCATGTTCTATGGAATTTATGCTGTCACAGTGAAGATATTCGTGCATGTGTTGAAAGTGCTGGGGCAATCCCAGCTTTCTTATGGCTTCTTAAGAGTGGTGGATCTAGAGGACAAGAAGCTTCTGCTATGGCACTTATAAAGCTTGTCCGCTCAGCTGATTCTGCTACCATCAATCAGCTATTAGCACTGCTCCTAGAACACTCTGCTAGCTCTAAGGCCCATATAATTCGAGTTTTAGGTCATGTACTCACTATGGCTTCGAAGAAGGACCTCCTACAAATGGGTTCTGCACCTAATAAAGGGTTGAAATCTCTTGTTCAGGTTCTGAATTCATCAAATGAGGAAACCCAAGAATATGCAGCTTCTGTCCTTGCTGATTTATTCAGCATGAGACAAGACATTTGTGATAGTTTGGCAACTGATGAGGTTGTCCATCCTTGCATGAAGCTTTTAACCAGCAAAACTCAAGTTGTTGCCACTCAGTCAGCTCGAGCATTGAGTGCTCTTTCTCGTCCAACCAAGAGTAAATCTACATATAAGATGCCTTATATTGCAGAGGGGGATGTCAAGCCACTAATCAAGTTGGCTAAAACTTCCTCTGTTGATGCTGCTGAAACTGCCATTGCTGCACTAGCCAATCTTCTCTTTGATCCCTTTATTGCTGCTGAAGCTCTGGCAGAAGATGTTATTTCAGCTTTAACAAGAGTATTGGCAGAAGGGACTACAGAAGGTAAACAACATGCATCACGTGCACTTCATCAATTACTGAAGCATTTTCCAGTAGGTGATATTCTGAAGGGGAATGCTCAGTGCCACTTCACTGTGCTTGCACTTGTTGATTCATTAAATGCAATGGATTTGGGAGGATCTGATGCTGCAGATGCTTTGGAAGTAATTGCTTTGCTAGCCAGGACAAAACAGGGTGTCAAATTCACTTACCCTCCTTGGTCTGCCCTTGCAGAAGTACCATCAAGCTTAGAACCTCTAGTGCGCTACCTCACTGAGGGACCTCATCTAGTGCAAGACAAAGCAATCGAAATTCTATGCAGGCTTTGTAGGGATCAACCAGTTTTGCTTGGCAAGTTGTTGGCAACTATGTCTAGTTCTATTGGTTCATTAGCTAATAGAATAATGAACTCCTCTAGTTTAGAAGTAAAAATTGGAGGAGCTTCCTTACTCATTTGTGCTGCAAAGGAACACAGAGAGATGTCAATGGATGTAATTGAGTTTTCAGGGTATATAAAATCATTAATATATGCTTTAGTTGATATGATGAAGCAGAACTCTAGCTGTTACTCATTAGAAATTGAAGTCCAAACACCTAGAGGTTTTATGGAGAGAAATGCATTTCAGGAAGTTGATGAATTTGATATTCCTGATCCCGCCACAGTTTTGGGTGGTACTGTTGCCTTATGGTTGCTCTCAATCATTGCTTCTTTTCATACAAAGAACAAGCTTACAATAATGGAAGCTGGCGGACTTGAGGCTCTCTGTGATAAGCTTACAACCCATACTTCCAGTTCACAGGCAGAATATGAGGATACTGAAGGAATATGGATTAGTGCCTTGCTCTTGTCCCTTTTGTTTCAAGATGCAAATGTTGTTCTATCTCCCGCAACTATGCGCATTATACCTTCTCTCACTCTTTTGCTGAGATCTGATGAAGTGATTGACAAATATTTTGCTGCCCAAGCTATGGCCAGTCTTGTTTCTAATGGTAACAAGGGAATTAATCTTGCCATTGCAAATTCCGGAGCTGTTGCTGGTTTGATAAATATGATTGGTTATATTGAGTCAGAAATGCCAAACCTTGTTGCTTTATCAGAAGAATTTTCCTTGGTGCAAAACCCTGATCAAGTTGTACTGGAGCACCTTTTTGAAATTGAAGATGTAAGAGTGGGATCTACTGCACGAAAATCCATACCCCTGCTAGTGGATCTGTTGAGACCAATACCAGAAAGGCCTGGTGCTCCACCAGTCGCTGTTAAACTCTTGACACGCATTGCAGATGGAAGTGATGCAAATAAATTAATCATGGCAGAAGCTGGAGCTCTCGAAGCTTTGAACAAATACCTGTCTTTGAGCCCTCAAGAATCCACAGAGGCTACTATTTCTGAGTTATTACGAATACTATTTTTCAATTCTGATCTTCTTAAACATGAAGCTTCAACAAGTTCCCTTAAGCAACTCATAGCTGTTTTGCGCCTTGGATCAAGAAATGCTAGATATAGTGCAGCAAGAGCACTTCAGGAGCTTTTTGATGCAGAGAGAATTAGGGAGTCTGAATTAGCTACACAGGCCATTCAGCCATTGGTTGACATGCTTAATACAGCATCAGGGAGTGAGCAGGAGGCTGCTCTTGTTGCCCTGATTAAGTTAACTGCTGGAAATTCTTCAAAAGCATTTCATTTTATGGATGTGGAAGGGAATTCACTTGAAATTTTATACAAAATATTGTCTTCTGCTTCTTCTTTGGAACTGAAGAGCAATGCTGCACAATTATGCTCTGTTCTTTTTGGTAACAGTAAGTTCAGATCTGATCCAATTGCCTCAGATTGTATAGAACCCCTTATATCTCTGATGCAGTCTGATTCTGGCAGGGCAATGGAATCTGGGGTTTGTGCTTTTGAGAGGTTGTTGGAAGATGAACAACAGATGCAGCTTGCAGCAACATATAATGTTGTGGATCTCCTTGTCAGTTTGGTTTCTGGTACAAATTATCAACTTATTGAGGCTGCCATATCTGCTCTCATCAAATTGGGCAAAGACAGGACTCCATGTAAATTAGACATGGTCAAAGCTGGAATTATTGATAATTGTCTGAAGTTACTCCATCTAGCACCGAGCTCATCATGGTCCACAATTGCAGAAATGTTCCGTATTTTAACCAATAGTAATGCAATTGCTAGAAGTTCAGCTGCTGCAGAAATTGTAGAACCCCTTTTCTATGTTTTGCTACATCAAGATTTCAACTTGTCAGGACAGCATAGTGCCTTACAAGCACTTGTAAATATATTGGAAAAGCCACAAAGTCTAGCAACCTTGAAGCTTACTCCCAGCCAAATTATTGAACCGTTGATTTCTTTCCTGGAATCCCCATCCCAAGCTATTCAGCAGCTTGGCATGGAACTGCTATCTCAGCTTCTTGCTCAGGAACATTTGCAGCAAGATATCACAACACAGAATGCAGTTGTGCCCCTCGTACAGCTTGCAGGAATTGGAATCTTAAACTTACAACAAACAGCAATAAAAGCATTGGAAAATATCTCCATAAGCTGGCCAAAGGCTGTTGCTGATGCTGGAGGCATTTTTGAACTTGCAAAGGTTATTATTCAAGATGACCCTCAGCCACCACATACACTCTGGGAATCAGCTGCTTTGGTTCTCTCTAATGTATTAAATTCCAATGCTGACTACTATTTTAAAGTTCCTGTGGTGGTCCTTGTAAAATTGTTGCACTCAACTCTGGAGAGTACAATTAGTGTAGCTCTTAATGCCCTGATAGTTCATGAAAGAAGTGATGCTTCAAGTGCTGAACAGATTATGGAAGCTGGAGCTATAGATGCTCTGTTGGACCTTTTAAGATCTCATAATTGTGAAGAAGCGTCTGGGAGATTACTTGAAGCTTTATTTAACAATGTGAGAGTACGAGAGATGAAGGTATCTCGGTATGCAATAGCACCTTTATCACAGTATCTGTTGGATCCACAAACCAGATCACAGTCTGGCAAGCTTCTTGCTGCTCTTGCTCTGGGAGATCTTTCCCAACATGAAGGACATGCTAGAGCCAGAGATTCAGTTTCTGCATGTCGAGCATTAATAAGCCTACTTGAAGACCAACATACTGAAGAAATGAAAATGGTAGCCATTTGTGCATTGCAGAACTTTGTCATGAACAGCAGGACTAACAGGCGAGCTGTTGCAGAAGCTGGTGGCATACTCGTGATTCAGGAATTGCTACTTTCTCCTAATCCTGAAGTTGGTGGCCAAGCGGCATTACTGATAAAATATTTGTTTTCTACTCACACTCTGCAAGAATATGTGTCCAATGAGCTGATCAGATCTTTGACAGCTGCACTGGAAAGAGAGTTATGGTCAACTGCCACAATCAATGAGGAAGTTCTGAAAACTCTGCATCTGATATTCATGAACTTCCCTAAGCTCCACATATCTGAAGCAGCAACTCTTTGCATTCCTCATTTGGTAGGGGCACTCAAATCTGGTAGTGAAGTTGCTCAGGACTCCGTACTCGACACCTTCTGCTTGCTAAGACATTCTTGGTCAACTATGCCCATAGATATATCAAAGTCTCAGGCTATGATTGCGGCTGAAGCCATTCCTATATTGCAAATGCTCATGAAAACCTGCCCACCAAGTTTCCATGAGAGAGCAGATAGTCTTCTGCATTGCTTGCCAGGTTGCTTGACTGTCACCATTAAGCGCGGAAACAACCTCAAGCAAGCTGTGGGAAGCACAAACGCATTTTGCCGGTTGATAATAGGCAATGGCCCTCCAAGACAAACCAAGGTAGTGAGTCATAGTACTTCTCCGGAATGGAAAGAAGGATTCACGTGGGCATTTGACGTTCCTCCAAAAGGACAAAAGCTCCATATCATATGCAAAAGCAAGAATACTTTTGGGAAGACAACGCTTGGAAAAGTGACTATCCAAATTGATAAAGTTGTAACAGAAGGAGTTTACAGTGGATTTTTCAGTCTTAATCATGATGGCAACAAATATGGCTCTTCTCGGACTCTTGAAATCGAGATAATCTGGTCCAACAGGATATCTAATGATGGCATCTGAGAAAAGAGTAGAGGCTACTTTCATGCGGCAGCGATCACAATAAATGGGAGCTCGG 6745 0.4208 MTEPLFSHTFTFLQFTLFLCLVPPFLPPLTLLSFRSFSGREFREWWLQLIFEGSSLPLKGFESIGDGVLSGECGFGGSLKEGALRHLQFMNCDYTIKSRQNAFSDIFIPIASRESNGATGVDDPESTMATVARFVEQLHASVSSPPETELITTRLLGIARARKDARTLIGSHGQAMPLFINILRNGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKCESTEARKAAAEAIYEVSSGGLSDDHVGMKIFITEGVVPTLWDQLNPKDKQDKVVQGFITGALRKLCGDKDGYWKATLEAGGVDIIVGLLSSDNAVAQSNAASLLARLVLAFSDSIPKVIDSGAVKVLLKLVGLENNISVRASAADALEALSSKSTSAKKAIVSEDGVPILIGAIVAPSKECMQSNCGQALQEHATWALANIYGGMSALILYLGELSHSPRLAAPVGDIIGALAYTLMVFEENLDDVEGEAFDATKIEDILVTLLRPRDSKLIQERVLEAMASLYGNICLSKWLNHADSKKVLIGLITMAAADVQEYLILSLTSLCCDRLGIWEAINKREGIQLLISLLGLSSEQHQEYAVHSLAILTDQVDDSKWAITAAGGIPPLVQLLETGSQKAREEAAHVLWNLCCHSEDIRACVESAGAIPAFLWLLKSGGSRGQEASAMALIKLVRSADSATINQLLALLLEHSASSKAHIIRVLGHVLTMASKKDLLQMGSAPNKGLKSLVQVLNSSNEETQEYAASVLADLFSMRQDICDSLATDEVVHPCMKLLTSKTQVVATQSARALSALSRPTKSKSTYKMPYIAEGDVKPLIKLAKTSSVDAAETAIAALANLLFDPFIAAEALAEDVISALTRVLAEGTTEGKQHASRALHQLLKHFPVGDILKGNAQCHFTVLALVDSLNAMDLGGSDAADALEVIALLARTKQGVKFTYPPWSALAEVPSSLEPLVRYLTEGPHLVQDKAIEILCRLCRDQPVLLGKLLATMSSSIGSLANRIMNSSSLEVKIGGASLLICAAKEHREMSMDVIEFSGYIKSLIYALVDMMKQNSSCYSLEIEVQTPRGFMERNAFQEVDEFDIPDPATVLGGTVALWLLSIIASFHTKNKLTIMEAGGLEALCDKLTTHTSSSQAEYEDTEGIWISALLLSLLFQDANVVLSPATMRIIPSLTLLLRSDEVIDKYFAAQAMASLVSNGNKGINLAIANSGAVAGLINMIGYIESEMPNLVALSEEFSLVQNPDQVVLEHLFEIEDVRVGSTARKSIPLLVDLLRPIPERPGAPPVAVKLLTRIADGSDANKLIMAEAGALEALNKYLSLSPQESTEATISELLRILFFNSDLLKHEASTSSLKQLIAVLRLGSRNARYSAARALQELFDAERIRESELATQAIQPLVDMLNTASGSEQEAALVALIKLTAGNSSKAFHFMDVEGNSLEILYKILSSASSLELKSNAAQLCSVLFGNSKFRSDPIASDCIEPLISLMQSDSGRAMESGVCAFERLLEDEQQMQLAATYNVVDLLVSLVSGTNYQLIEAAISALIKLGKDRTPCKLDMVKAGIIDNCLKLLHLAPSSSWSTIAEMFRILTNSNAIARSSAAAEIVEPLFYVLLHQDFNLSGQHSALQALVNILEKPQSLATLKLTPSQIIEPLISFLESPSQAIQQLGMELLSQLLAQEHLQQDITTQNAVVPLVQLAGIGILNLQQTAIKALENISISWPKAVADAGGIFELAKVIIQDDPQPPHTLWESAALVLSNVLNSNADYYFKVPVVVLVKLLHSTLESTISVALNALIVHERSDASSAEQIMEAGAIDALLDLLRSHNCEEASGRLLEALFNNVRVREMKVSRYAIAPLSQYLLDPQTRSQSGKLLAALALGDLSQHEGHARARDSVSACRALISLLEDQHTEEMKMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSPNPEVGGQAALLIKYLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLKTLHLIFMNFPKLHISEAATLCIPHLVGALKSGSEVAQDSVLDTFCLLRHSWSTMPIDISKSQAMIAAEAIPILQMLMKTCPPSFHERADSLLHCLPGCLTVTIKRGNNLKQAVGSTNAFCRLIIGNGPPRQTKVVSHSTSPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKTTLGKVTIQIDKVVTEGVYSGFFSLNHDGNKYGSSRTLEIEIIWSNRISNDGI 2229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00860 2229 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 607 649 IPR000225 GO:0005515
Bach12g00860 2229 Gene3D - 121 249 IPR011989 -
Bach12g00860 2229 Gene3D - 250 509 IPR011989 -
Bach12g00860 2229 Gene3D - 1436 1576 IPR011989 -
Bach12g00860 2229 SMART arm_5 337 378 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 1510 1550 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 1382 1423 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 162 203 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 638 678 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 759 799 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 1928 1968 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 204 244 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 845 885 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 1802 1843 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 553 594 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 1300 1340 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 1109 1158 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 249 293 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 804 844 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 380 429 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 1678 1719 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 596 636 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 294 335 IPR000225 GO:0005515
Bach12g00860 2229 SMART arm_5 712 757 IPR000225 GO:0005515
Bach12g00860 2229 Gene3D - 1771 1891 IPR011989 -
Bach12g00860 2229 Gene3D - 1253 1435 IPR011989 -
Bach12g00860 2229 Gene3D - 519 718 IPR011989 -
Bach12g00860 2229 Gene3D - 1892 2099 IPR011989 -
Bach12g00860 2229 Gene3D - 1577 1768 IPR011989 -
Bach12g00860 2229 SUPERFAMILY ARM repeat 1288 1636 IPR016024 -
Bach12g00860 2229 Gene3D - 920 1240 IPR011989 -
Bach12g00860 2229 SUPERFAMILY ARM repeat 175 963 IPR016024 -
Bach12g00860 2229 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2100 2206 IPR035892 -
Bach12g00860 2229 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 112 2223 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Bach12g00860 2229 Pfam C2 domain 2102 2201 IPR000008 -
Bach12g00860 2229 ProSiteProfiles C2 domain profile. 2082 2199 IPR000008 -
Bach12g00860 2229 Pfam Armadillo/beta-catenin-like repeat 600 635 IPR000225 GO:0005515
Bach12g00860 2229 CDD C2 2103 2193 - -
Bach12g00860 2229 Gene3D - 719 896 IPR011989 -
Bach12g00860 2229 SUPERFAMILY ARM repeat 307 551 IPR016024 -
Bach12g00860 2229 SUPERFAMILY ARM repeat 949 1222 IPR016024 -
Bach12g00860 2229 Gene3D C2 domain 2101 2226 IPR035892 -
Bach12g00860 2229 SUPERFAMILY ARM repeat 1651 2016 IPR016024 -
Bach12g00860 2229 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 728 755 IPR000225 GO:0005515
Bach12g00860 2229 SMART C2_3c 2102 2198 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00860 Bach-Chr12 6071863 6081751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00860 526 794 U-box Gene Family AT2G23140 28.623 4.61e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00860 - - aprc:113846793 3435.97