Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00843 TTTACGATGAGCGACAAGCTTCTCTAATCTCTCTTCTCTTTCATTATGGCTGTCATCACCACCGACTCTCCTATCTCTCGTCGAATAGTTCGTGCCTTCGTCAACTTCCTCGATTCTGTTGAACCGGCTCCTGGTGTTGATCTAGAAGGACTTGAGGTTGCTAAGGAGTGTTTGACAGAGATATTTAAGCTTGATAATCATCCCGTAGATGATGATGCAAGATGTGATTCATTAGTTAACATATTCAAGTCCCTTGAAGCAAACAAGCAACCTGAAACTATTAAGTCGGATATTGCTGATCAAGCAGATTCAGTGGATGCTCCCAGTTCATTCTCTGCCCAGAATGCTGCTCATACTAAAGATCATTCAGGACCATCAAAAGCTCTGGAGAAGGAGTGGATGCCGGGCACTCAGACTTTTGCAGGAGTATCTAAAGATGAACTTTGTGGGCAATTCTTTGCTGCTCTGGAGAAATTACACTTCTTTAGGAACAGACCTGATGGGAGTGATGATCCAGTGCAACTGGAGAAAGCATCGCAAATATTTGAAGAGGGTATTATGGAAATGGAAAGATCTGGATGTCCAGAGTTTAATCTGAGGAACTTGGCTGAATCACTGAAATCACATGGTAATAAAGCAATGCAATCTAAGAAATACACCGATGCAATTGAGTTGTATGACTGTGCAATTGCGCTATGTGATAATAATGCTGTTTACTACTGCAATAGGGCTGCTGCTTACACTCAAATCCACAAATATACTGATGCAATCCAAGATTGCCTTAGATCTATTGAGATTGACCCAAATTATAGCAAAGCATACAGTCGTTTGGGCTTAGCTTATTATGCACAGGGAAACTACAGAGATGCTATTGATAAAGGGTTTAAAAAAGCCTTGCAGTTGGATCCAAATAACGAGTCTGTTAAAGAAAATATCCGGGTGGCTGAACAAAAATTGTCAGAACAGCGACATCATGCAGATAATGGTCAGTATGGAAGATGGTTTCAAGAGTTTCAGAACCGCTCTGCGCAAGGTTCAACAAACCATGAAGCACCACCTACGTTTAGCTCAATGCCTTTTAATCCCAGCGATATGGCAAACATGTTCATGAACATGGCGTCAAACGCATCCCACGGGCATGGTCCTCAAGAAAGTGGGCAAGGAGAAGATCACAGCAATAGCAGTGAAACTAATGAGCCCGAAATAAGAATTGGGCATAATGTTAGTATAAACCTCGGAGAAATGCCTATGGCTATGCCTGAGGAGCTAACAGGAGCACTTAGATCTGTGATGGAAATGTTATCTGGAACAGCACCACATGGGCAACCGGAAAATCACATGAACGGAAGTTCACCAAATTAA 1362 0.4214 MAVITTDSPISRRIVRAFVNFLDSVEPAPGVDLEGLEVAKECLTEIFKLDNHPVDDDARCDSLVNIFKSLEANKQPETIKSDIADQADSVDAPSSFSAQNAAHTKDHSGPSKALEKEWMPGTQTFAGVSKDELCGQFFAALEKLHFFRNRPDGSDDPVQLEKASQIFEEGIMEMERSGCPEFNLRNLAESLKSHGNKAMQSKKYTDAIELYDCAIALCDNNAVYYCNRAAAYTQIHKYTDAIQDCLRSIEIDPNYSKAYSRLGLAYYAQGNYRDAIDKGFKKALQLDPNNESVKENIRVAEQKLSEQRHHADNGQYGRWFQEFQNRSAQGSTNHEAPPTFSSMPFNPSDMANMFMNMASNASHGHGPQESGQGEDHSNSSETNEPEIRIGHNVSINLGEMPMAMPEELTGALRSVMEMLSGTAPHGQPENHMNGSSPN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00843 438 MobiDBLite consensus disorder prediction 90 114 - -
Bach12g00843 438 Coils Coil 290 310 - -
Bach12g00843 438 Pfam Tetratricopeptide repeat 257 290 IPR013105 -
Bach12g00843 438 Gene3D Immunoglobulin FC, subunit C 5 73 - -
Bach12g00843 438 MobiDBLite consensus disorder prediction 90 106 - -
Bach12g00843 438 SUPERFAMILY TPR-like 187 301 IPR011990 GO:0005515
Bach12g00843 438 Gene3D Tetratricopeptide repeat domain 184 343 IPR011990 GO:0005515
Bach12g00843 438 Pfam Tetratricopeptide repeat 222 255 IPR001440 GO:0005515
Bach12g00843 438 SMART tpr_5 188 221 IPR019734 GO:0005515
Bach12g00843 438 SMART tpr_5 256 290 IPR019734 GO:0005515
Bach12g00843 438 SMART tpr_5 222 255 IPR019734 GO:0005515
Bach12g00843 438 ProSiteProfiles TPR repeat profile. 222 255 IPR019734 GO:0005515
Bach12g00843 438 ProSiteProfiles TPR repeat profile. 256 290 IPR019734 GO:0005515
Bach12g00843 438 MobiDBLite consensus disorder prediction 326 389 - -
Bach12g00843 438 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 183 333 - -
Bach12g00843 438 PANTHER LD24721P 3 430 IPR047150 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00843 187 286 U-box Gene Family AT3G07370 33.000 6.74e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00843 K16365 - gmx:100799770 543.888