Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00838 ATGCCAAATCAAAAGTCCATTTTACAGAGCACTTTCCTCTTGATACTTTTGCAGGTTTTAATCAATGTAGCTCCTGTGAGCTGTAAATCTACGATCGAGCCTTGCTCAAACTCCGACTCGTGTAATGCTCTCTTGGGCTACACCCTTTACACTGACCTAAAGGTCTCTGAAGTCGCTTCTCTCTTCCAAGTAGATCCTATTGCTCTTCTCACCGCCAATTCAATTGATATTTCATACCCTGACGTAGAGCACCATATTCTCCCTTCCCAACTCTTCCTCAAAATCCCTATAACCTGTTCATGTGTTGATGGAATCCGCAAATCGGTGTCGACCCACTACAAAACTCGCCCCTCTGATACTCTCTCTTCGATTGCAGATTCTATCTATGGGGGTTTGGTGTCTGCTGACCAGATTAGAGAGGCAAATTCGATAGCTGACCCTTCAGTGCTTGATGTGGGTCAAAATCTTGTCGTGCCTCTTCCGTGCACCTGCTTCAATGGGACTGACAACTCTTTGCCTGCAATATACTTGTCGTATGTGGTGCAGCCAATTGATACTCTGGCTGCAATTGCCGCGAGGTATTCCACTACTCTTACTGATTTGATGAATGTCAATGCCATGGGGAGCTCGGCTATCAGTGATGGTGATATTCTCGCTATTCCAATTCCCGCTTGTGCATCAAACTTCCCAAGGTCTGCCTCCGATTATGGCTTACTTGTCCCCAACGGAAGCTATGCAATTACAGCGGGTCACTGTGTGCAATGCAGCTGTGGGCCTGGAAATCTAAATTTGTACTGTATGCCTGCTTCTCTGGCAGTTTCTTGTTCTAGCATGCAGTGTAAAAACAGCAACCTAATGCTTGGGAATGTTACAGTGCAACAGAGTAGTGCTGGTTGCAATGTTGCTTCTTGTGCTTATGATGGTATTGTTAATGGTACCATAGTGACAACATTGTCTGCGTCCCTTCGACCTCGATGCCCAGGGCCGCAGCAATTCCCTCCTCTTGTAGCTCCACCTACTTCTGTTCAAAGGGAATCAATATTTGCACCAGCACCATCACCTCAGTCAGATGAAGGTGGTACCCCAACGCCAAGATCGCTTGTGCCAGCAACAGGGTCATTTCCTGGATTCCCCCCAGCAAATGGCCCTATTAGTAGTGGGTTAGCTTCGGGTGCTTCTGATGCCTGCTCCTTGGTGAATCCGTTACCCACTTTAATGGCTGCACTTGTGTTATTGTTTGTCAAGTTGATGATCCCTGTGGCATTGTAA 1269 0.4681 MPNQKSILQSTFLLILLQVLINVAPVSCKSTIEPCSNSDSCNALLGYTLYTDLKVSEVASLFQVDPIALLTANSIDISYPDVEHHILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLSSIADSIYGGLVSADQIREANSIADPSVLDVGQNLVVPLPCTCFNGTDNSLPAIYLSYVVQPIDTLAAIAARYSTTLTDLMNVNAMGSSAISDGDILAIPIPACASNFPRSASDYGLLVPNGSYAITAGHCVQCSCGPGNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTVQQSSAGCNVASCAYDGIVNGTIVTTLSASLRPRCPGPQQFPPLVAPPTSVQRESIFAPAPSPQSDEGGTPTPRSLVPATGSFPGFPPANGPISSGLASGASDACSLVNPLPTLMAALVLLFVKLMIPVAL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00838 422 SMART LysM_2 178 221 IPR018392 -
Bach12g00838 422 SMART LysM_2 112 159 IPR018392 -
Bach12g00838 422 SUPERFAMILY LysM domain 177 222 IPR036779 -
Bach12g00838 422 CDD LysM 178 220 IPR018392 -
Bach12g00838 422 Gene3D LysM domain 107 168 IPR036779 -
Bach12g00838 422 MobiDBLite consensus disorder prediction 347 368 - -
Bach12g00838 422 SUPERFAMILY LysM domain 111 160 IPR036779 -
Bach12g00838 422 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Bach12g00838 422 Gene3D LysM domain 169 229 IPR036779 -
Bach12g00838 422 Pfam LysM domain 113 159 IPR018392 -
Bach12g00838 422 Pfam LysM domain 179 221 IPR018392 -
Bach12g00838 422 MobiDBLite consensus disorder prediction 347 372 - -
Bach12g00838 422 ProSiteProfiles LysM domain profile. 177 220 IPR018392 -
Bach12g00838 422 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 12 330 - -
Bach12g00838 422 CDD LysM 111 158 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00838 Bach-Chr12 5899606 5901993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00838 4 386 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 72.280 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00838 - - qsa:O6P43_019748 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00838 12 5899606 5901993 Bach12g00838 12 5899606 5901993 ECH