Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00828 ATGTCTTTGAGCCCTCCTCGACTGAGGACTAATAATGGGCAGCCTTACTGGTGCTTCCGGTGTAATATGGTAGTCAGGGTCGCCTCCACAAACCCTTCAGAGATTCTCTGCCCTCGCTGTCTTGGGGGATTCCTCAGTGAATTAAACATATCATGGCCTAGATTTGTTACCAATTTCATCAATCACAATCCTTCCCCAGAAACACTTTTATTCGAAGCGCTTTCTCTGATGCTTGCCCCAACAATAAGGCGCAATAACAGCCATCACCATGACCAGGAAGCTGAACCTCCTGGACGCCTTATTTTGAATCAGAGACAACCTCGTAATCGGGAACAAGAAGACAGGCGTCATGTAAGACGTCCACAATATCATCGTGGGTTTGATGGTAATAATAATACCAGAAATGACACATGGATAATTGTTCCACCAATGGATCGTTCTCCTCCATTGGAGCTAATTCCTCGACCTCGACGAGAAAATCCTATCCCACGTGGGGCTAATCCAAGAGACTACTTTTTTGGGCCGGTTCTGAACGAATTGATTGAGCAATTGACTGAGAATGACCGGCAAGGTCCGGCGCCGGCGCCGGAAAGAACAATCGATGCGATTCCAACAGTGAAAATCTCGGAGACCCATTTGAAGGAGAACTCTCACTGCTCCGTTTGCCAGGAGGAGTTTGAAGTGGGTGGGCAAGCAAGGGAGTTACCCTGCAAACACATATACCATTCTGATTGTATTGTTCCTTGGCTAAGGCTTCACAATACTTGCCCTGTTTGCCGGCATATGGTGCCGGAGTCTTCTGCCTCCGATGAATCTCAGGAAGGTGGAGGAGGCAGGTCGCACAGGGGCTTCAGGTGGAGGCAACGGACTCCTCGGTTACCTTTAAATGAAGGGTCTCGACGGGTTAATCCAGAAGCATAG 921 0.4864 MSLSPPRLRTNNGQPYWCFRCNMVVRVASTNPSEILCPRCLGGFLSELNISWPRFVTNFINHNPSPETLLFEALSLMLAPTIRRNNSHHHDQEAEPPGRLILNQRQPRNREQEDRRHVRRPQYHRGFDGNNNTRNDTWIIVPPMDRSPPLELIPRPRRENPIPRGANPRDYFFGPVLNELIEQLTENDRQGPAPAPERTIDAIPTVKISETHLKENSHCSVCQEEFEVGGQARELPCKHIYHSDCIVPWLRLHNTCPVCRHMVPESSASDESQEGGGGRSHRGFRWRQRTPRLPLNEGSRRVNPEA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00828 306 MobiDBLite consensus disorder prediction 106 124 - -
Bach12g00828 306 FunFam E3 ubiquitin-protein ligase RING1-like 183 266 - -
Bach12g00828 306 Pfam zinc-ribbon 14 48 IPR039525 GO:0061630
Bach12g00828 306 Pfam Ring finger domain 218 260 IPR001841 -
Bach12g00828 306 SUPERFAMILY RING/U-box 199 265 - -
Bach12g00828 306 CDD RING-H2_RNF126-like 219 260 - -
Bach12g00828 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 102 263 - -
Bach12g00828 306 SMART ring_2 219 259 IPR001841 -
Bach12g00828 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 266 IPR013083 -
Bach12g00828 306 ProSiteProfiles Zinc finger RING-type profile. 219 260 IPR001841 -
Bach12g00828 306 MobiDBLite consensus disorder prediction 265 306 - -
Bach12g00828 306 MobiDBLite consensus disorder prediction 86 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00828 Bach-Chr12 5824051 5824971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00828 191 293 C3H Transcription Factor Family AT1G68180 43.810 2.44e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00828 K11982 - qsa:O6P43_015206 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00828 12 5824051 5824971 Bach12g00828 12 5824051 5824971 ECH